Ochotona curzoniae (black-lipped pika): 121145839
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Entry
121145839 CDS
T11174
Symbol
NUP42
Name
(RefSeq) nucleoporin NUP42 isoform X1
KO
K14321
nucleoporin-like protein 2
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121145839 (NUP42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121145839 (NUP42)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121145839 (NUP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH_4
zf-CCCH
zf-CCCH_2
JetA
Motif
Other DBs
NCBI-GeneID:
121145839
NCBI-ProteinID:
XP_040820914
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MTVCQFFLQGRCRFGERCWNEHPGARGTGGGGRQQLQQPPSGGNRRGWNPPSQRYSSVIQ
PSSFSRSAPWGDSRDQERSFDSGTATVRNRGFGLSENSFASLDTHGQEDEKKLLEGIIKD
MMVWKSSGQWMFSVYSPIKRKSNISGFTDISPEELRLEYHNFLTSNNLQSYLNSVQQLVN
QWSNRVDELKTINASTKAALLSDTKDGMSEAAPALGFGSSQTTFGSPGFPVKSSSDNAQA
FNFKLSSGFGTTPSGGPAVFGGPPAFGVGPAAGAASTPSFGFGKPEVTSAAAFSFKSPTA
SNLQSPGFSGFAASSAAGAGGAPGAPAFGSSASAAGFGQVGSQSHAAFSKPSSNIFGSSS
SSFSLPASNATVATDNTLFTPKDQLTTEELEQFQSRKFTLGKIPLKPPPLELLNI
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtctgtcagttcttccttcagggccggtgccgcttcggagaacggtgctggaat
gaacaccccggggcccgtgggacggggggcggaggacggcagcagctccagcagccgcct
tcgggcggcaacagacgcgggtggaatccgccaagccagaggtattccagtgtcatccag
ccatccagcttttccaggtcggcgccttggggagacagcagagaccaggagcgttccttc
gattctggcactgccacggtcaggaacaggggcttcgggctgtccgagaactcctttgct
tcgcttgatacccacgggcaggaagatgaaaagaaacttctggaaggaattataaaagat
atgatggtttggaagtcgtcaggacagtggatgttttctgtttattcaccaataaaaagg
aaatccaatatttcaggttttacagacatatcaccagaggagttgaggcttgaataccat
aacttcttaaccagcaataacttacagagttatctaaattctgtgcagcaattagttaat
cagtggagcaacagggtagatgagctgaaaactatcaatgcctcgaccaaagcagccctg
ctctctgatacaaaggatggaatgagtgaagcagcacctgcattgggctttggcagtagc
cagacgactttcgggtcacctggttttcccgtgaaaagcagcagtgataatgctcaggcc
tttaactttaagctcagttctggatttggcaccaccccctcgggaggccctgcagtgttt
gggggtcctccagcctttggggtgggccctgctgctggcgctgcctccacaccctccttt
gggtttgggaagcccgaagtcacatccgctgctgccttctcttttaaaagccccacagct
tccaacttgcagtcaccaggtttttcgggatttgcagcgtcctcagcggcaggcgctggc
ggagcgcccggagcccctgccttcggtagcagcgcgtctgcagctggtttcggtcaggtg
ggctcgcagtcgcacgctgccttttccaagccatccagcaacatctttggcagcagcagc
tcctccttctccctcccagcctcaaatgccactgtcgcgacagacaacacgctgttcaca
cccaaggaccagctcaccacagaagaactggagcagttccagtctaggaagtttactttg
ggaaaaatcccgctgaagccgccacccctggagcttctaaatatttaa
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