Ochotona curzoniae (black-lipped pika): 121145932
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Entry
121145932 CDS
T11174
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocz04131
]
121145932 (VPS50)
Membrane trafficking [BR:
ocz04131
]
Protein recycling
Others
EARP complex
121145932 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
MJ1674_2nd
Motif
Other DBs
NCBI-GeneID:
121145932
NCBI-ProteinID:
XP_040821085
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLGDLGALENFRVPGKEEFRELREQPCDPQAEQELINSIEQV
YFSSDSFDIVKYELEKLPPVLNLQELEEYRDKLKKQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDVNHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHERHDGEETTAAAEG
SNTMGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFLEQSRSPSVSPSKQPASTSSKTVTLFEQYCHGGNPFEVQDNHRDDETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSADPAATLTASEERKEKVPSPHLSHLVVLTSG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNMYVDALLKEFEQFNRRLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVEAYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtctcttatgacccgtcagggtctgaagagccccccggagagcctc
ggcgacctcggtgccctcgagaattttcgggtccctggaaaggaggaattcagggaactc
cgcgagcagccctgcgacccacaagctgaacaagagctgattaacagcatcgagcaagtg
tatttttcttcagactcatttgatattgttaaatatgaactggagaaactccctcctgtt
ctcaatttgcaagaattagaggagtacagagacaaactgaaaaagcagcaagctgccgtc
tctaaaaaagtggcagatttaatccttgaaaagcagcctgcctatgtgaaggaacttgaa
agagtcacctcactgcagacagggcttcagctggctgccgtcatctgcaccaatggcagg
agacacctgaatattgcaaaagaaggtttcactcaagccagtctaggcctccttgcaaat
caaaggaaacgtcagctgttgattggactcctgaagtctctgaggacgatcaaaacattg
caaagaacagacgtacgcttgagcgagatgctggaggaggaagactatcccggagctatc
cagctgtgcctggaatgtcagaaagcggccagcactttcaagcactacagttgtataagt
gaactgaattcaaagctgcaagacactctagaacaaattgaggaacagttggatgtggcg
ctttctaaaatctgcaagaattttgatgttaaccattataccaaggtccagcaagcttat
cgactacttggcaagacacagacagcaatggatcaacttcatatgcacttcactcaggcc
attcacaatactgtgttccaagtcgtccttggctacgtggaactctgtgcgggcaacacg
gacacaaaattccagaaactacagtataaagatctgtgcacacatgtcacgccagacagc
tacatcccgtgccttgcggacctgtgcaaagccctctgggaagtcatgctcagttattac
aggactatggagtggcatgagagacacgatggcgaggagaccactgctgctgctgaaggg
agtaatactatgggtaccgaagaaaccaattttgatcgtggctatataaaaaagaagtta
gaacatggacttacacgaatatggcaggatgtgcagttaaaagtgaaaacctacttgctt
ggaactgacttgtctatattcaaatatgatgatttcatctttgttttggatataatcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttctgcaggagtct
attagaaagcaaagtgtcaattatttcaagaactatcatagaacacgacttgatgaactg
agaatgttcttggagaatgagacctgggaactctgtcctgttaagtcaaatttcagcatc
ttacaacttcatgagtttaaattcctggagcagtctcgctccccatcagtttcacctagt
aagcagccagcatcaacttcttcaaaaacagtcaccttatttgagcagtactgccatggt
ggcaacccatttgaagttcaagacaatcacagggatgacgaaacagaggacgtcctggct
tctaatgggtacgagtccgacgagcaggagaagagtgcctatcaggagtacgacagcgac
agcgacgttcctgaggagctcaagcgggactacgtggatgagcagacgggcgacgctccc
gtgaagagtgtttctcgagaaaccctaaaaagcaggaagaaatcggattacagtctaaat
aaagtgaatgcacctatcttaacaaatacaacattaaatgtaatcaggcttgttgggaaa
tacatgcaaatgatgaatatccttaagccaattgcctttgatgttatccatttcatgtcc
cagctatttgattattacttgtatgcaatatacactttttttggtcggaatgattcattg
gaatcaacggggcttggccttagtagcagcagactgagaacgactctaaacagaatacag
gaaagcctcattgatttggaagtttcagccgaccctgctgccactctcacagcctcagag
gaaagaaaggagaaggtcccgagcccacacctcagtcacctcgtggttttgacgtctggg
gacacgttgtacgggctggcagaaagagtggtggccacagaatccctggtgttcttggct
gagcagtttgagttcctgcagcctcacttggatgctgtgatgcccgcagtcaaaaagccc
tttctccagcagttctattctcagacagtctcaactgccagtgaactacgcaaacccatt
tactggattgtagctggtaaagccatcgactacgagcagatgctgctgctcatggccaac
gtgaagtgggacgtaaaggagattatgtcgcagcacaacatgtatgtggatgcattgctg
aaggaatttgaacagtttaatagaagattgaacgaagtttctaagagagttcggataccc
ttgccagtgtctaatattctttgggaacattgtattcgactggctaatagaactattgtg
gaaggatatgccaatgtcaaaaagtgcagcaatgagggtcgtgccttgatgcaattggat
tttcaacagtttttaatgaagcttgagaagctaacagatattagacccattcctgataaa
gaatttgtggaagcctacattaaagcctactacctaactgagaatgacatggaacgctgg
atcaaagaacatagggagtattcaacgaagcagctaaccaacctggtgaacgtttgcctg
ggatcccatatcaataagaaggcaagacagaaacttctagctgctatagatgacatagac
agacctaaaagataa
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