Ochotona curzoniae (black-lipped pika): 121146096
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Entry
121146096 CDS
T11174
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
121146096 (TRIM71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121146096 (TRIM71)
04121 Ubiquitin system [BR:
ocz04121
]
121146096 (TRIM71)
Enzymes [BR:
ocz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121146096 (TRIM71)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121146096 (TRIM71)
Ubiquitin system [BR:
ocz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121146096 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-C3HC4
zf-RING_5
YlbD_coat
Motif
Other DBs
NCBI-GeneID:
121146096
NCBI-ProteinID:
XP_040821320
LinkDB
All DBs
Position
Unknown
AA seq
877 aa
AA seq
DB search
MASFAETDFQICLLCKEMCGSPAPLSSNSSASSSSSQTSTSSAGGGGPGAAARRLHVLPC
LHAFCRPCLETHRLPAAASSAPGEPLKLLCPVCDQKVVLAEAAGMDSLPSSAFLLSNLLD
AVVATADEPQPKNGRAGAPAGAGGHSNHRHHPHPRAPASAPPLPPPSAPVLPSQQSAPSR
SAAPGGPTASQSALLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHF
IERGPPGPAAAAAAAAAAAAQQLGLAPPFPSAPFSILSVFPERLGFCQHHEDEVLHLYCD
TCSVPICRECTLGRHGGHNFLYLQDVVQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAE
QVEMKAKVVQTEVKAVAARHKKALEERECELLWKVEKIRQVKAKSLYLQVDKLRQHLNKL
ENTISAVQQVLEEGRALDILVARDRMLAQVQELKTVRGLLQPQEDDRVMFTPPDQALYLA
IKSFGFVSSGAFAPLTKATGEGLKRALQGKVASFTVIGYDHDGEPRISGGDLMSAVVLGP
DGNLFGAEVIDQQNGTYVVSYRPQLEGEHLVSVTMCNQHIENSPFKVVVKSGRSYVGIGL
PGLSFGSEGDGDGKLCRPWGVTVDKEGYIVVADRSNNRIQVFKPCGSFHHKFGTLGSRPG
QFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSE
GKILVSDTRNHRVQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRL
LVIHPDCQSARFLGSEGTSNGQFLRPQGVAVDQEGRILVADSRNHRVQMFESNGSFLCKF
GSQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVY
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgttcgccgagaccgacttccagatctgcttgctgtgcaaggagatgtgcggt
tcgcccgcacctctctcctccaactcgtctgcctcctcttcgtcctcacagacgtccacg
tcgtccgcaggcggcgggggccccggagccgcggcgcgccgtctgcacgtcctgccctgc
ctgcacgccttctgccgcccctgcctcgagacgcaccggctgccggccgcggccagtagc
gctccgggagagccgctgaagctgttgtgtccagtgtgcgaccagaaggtcgtgctggcc
gaggcggcaggcatggactcgctgccttcgtccgccttcctcctcagcaacctgctggac
gccgtggtggccaccgccgacgaaccgcagcccaagaacgggcgcgccggtgcccccgcg
ggcgcaggaggccacagcaaccaccggcaccacccgcatccgcgcgcgcccgcctccgcg
cctccgctcccgccgccgtcggcaccggtgctaccatcacagcaaagcgccccttcccgc
tccgctgctccgggcggcccgactgcgtcccagtcggcgctgctgctgcgccgccctcac
ggctgcagctcctgcgacgagggcaacgcggcctcctcgcggtgcctggactgccaggaa
cacctgtgcgacaactgcgtccgcgcgcaccagcgcgtgcggctcaccaaggaccacttc
atcgagcgcggcccgccggggcccgccgccgccgctgcagccgccgccgccgccgcggcg
caacagctcgggctcgcgccgcccttccccagcgctcccttctccatcctctcggtgttc
cccgagcgcctcggcttctgccagcaccacgaggacgaggtgctgcacctgtactgtgac
acctgctccgtgcccatctgtcgggagtgcacgctgggccggcatgggggccacaacttc
ctctacctccaggacgtggtgcaggactcgagggcgctcaccatccagctgctggctgac
gcgcagcagggacgtcaggcgatccagctgagcatcgagcaggcgcagacagtggcagaa
caggtggagatgaaggcaaaggtggtacagactgaggtcaaggctgtggctgcgaggcac
aagaaggccctggaggaacgcgagtgtgagctgctgtggaaggtggagaagatccgccag
gtgaaggccaagtccctgtacctgcaggtggataagctgcggcagcacctcaacaaactg
gagaacaccatcagcgccgtgcagcaggtactggaggagggccgggcgctcgacatcctg
gtggcccgagaccgcatgctggcccaggtacaggagctgaaaaccgtgcggggcctcctg
cagccgcaggaagatgaccgagtcatgttcacgccccccgaccaggctctgtacctggcc
atcaagtcctttggttttgtcagcagcggggcctttgccccactcaccaaggccacgggt
gagggtctcaagcgggccctccagggtaaggtggcctccttcaccgtcatcggctacgac
cacgacggcgagcctcgcatctccgggggagacctcatgtcggccgtggtcctgggcccc
gatggcaacctgtttggtgccgaagtgatcgaccagcagaacggaacgtacgtggtgagc
taccggccccagctggagggcgagcatctggtgtcggtgaccatgtgcaaccagcacatt
gagaacagccccttcaaggtggtggtgaagtcgggccgcagctacgtgggcatcgggctg
ccaggcttgagcttcggcagcgagggcgacggtgatggcaagctgtgccgcccctggggc
gtgaccgtcgacaaggagggctacattgttgtcgccgaccgcagcaacaaccgcatccaa
gtgttcaagccctgtggttccttccaccacaagtttggcaccctgggctcccggcccggg
cagtttgaccggccagccggcgtggcctgtgacgcctcccgccgcattgtggtggctgac
aaggacaatcatcgcatccagatcttcacctttgagggccagttcctcctcaagtttggc
gagaagggcaccaagaacgggcagttcaactacccttgggatgtggccgtgaattccgag
ggcaagatcctggtctcggatacccgtaaccaccgcgtccagctgttcgggcccgacggt
gtcttcctgaataagtatggcttcgagggcgccctctggaagcacttcgattccccacgt
ggtgtggccttcaaccacgagggccacttggtggtcaccgatttcaacaaccaccggctg
ctggtcatccaccccgactgccagtcggcacgcttcctgggctctgagggtaccagcaac
gggcagttcctgcgtccgcagggcgtggctgtggatcaggaggggcgcatcctcgtggcc
gattcccgaaaccaccgagttcagatgttcgaatccaacggcagcttcctgtgcaagttt
ggctcccagggcagcggcttcgggcagatggaccggccgtctggcatcgccgtcaccccc
gatggcatgatcgttgtggtggatttcggcaacaatcgaatcctcgtctactaa
DBGET
integrated database retrieval system
