Ochotona curzoniae (black-lipped pika): 121146169
Help
Entry
121146169 CDS
T11174
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03015
mRNA surveillance pathway
ocz05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121146169 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
121146169 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121146169 (HBS1L)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121146169 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
AAA_22
GTP_EFTU_D4
DO-GTPase2
AAA_29
Motif
Other DBs
NCBI-GeneID:
121146169
NCBI-ProteinID:
XP_040821422
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MTVSGKKQTMGFEVPAITSQENGHGLHTPQKGEDASSAAPGPPEATSKAAAPAHPGPASE
EQGSTAALGKKAGKARQQMDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGN
VNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAP
GHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVN
KMDQVNWQQERFQEIAGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSSELTKWYK
GLCLLEHIDSFKPPQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPN
ETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKMNVGCIFCGPKEPIRACMRFRARIL
IFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLSKSTGEVTKKKPKFLTKGQNALVELQ
TQRPIALELYKDFKELGRFMLRYSGSTIAAGVVTEIKE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgtctggaaagaagcaaacaatgggatttgaagtgcctgcaataacttcccaa
gagaatggccatggtttgcacacacctcagaaaggtgaagacgcaagcagcgctgctcct
ggtcctccggaggccacgtccaaggcagcggctcccgctcacccggggccggcgtctgaa
gagcagggctccacggccgcactgggcaaaaaggctggcaaggcgcggcagcagatggac
gtgaaggcagagctggagaagcgacaaggagggaagcagctcctgaacctggtggtcatt
ggtcatgttgatgctgggaaaagtactctgatgggccatatgctttatctgctgggtaat
gtaaacaaaaggactatgcataagtatgaacaggagtctaaaaaggctggcaaagcttcg
tttgcatatgcgtgggtcttggatgagactggcgaagaaagggaaaggggagtcacaatg
gatgttggtatgacaaaatttgaaaccactaccaaagtgattacgttaatggatgctcca
ggccataaggatttcattcccaacatgattacaggagcagcccaggcggatgtggctgtg
ttggttgtggatgccagcagaggcgagtttgaagctggatttgagactggaggccagacg
cgtgagcatggccttctggtccgatctcttggggtgacacagcttgcagttgcagtcaac
aagatggatcaggttaattggcaacaagaaaggtttcaagaaattgctggaaaacttggg
cactttcttaagcaagcaggttttaaggagagtgatgtggcttttatccccacaagcggt
ctcagtggcgaaaacctcatcacaagatctcagtcaagcgaactcacaaaatggtataaa
ggactatgcttattagaacatattgattccttcaaacctcctcaacgatctgttgataaa
ccttttagattgtgtgtgtctgatgttttcaaagatcaaggatctggattttgtgtaact
ggtaaaattgaagctggttacatccaaactggtgaccgactactagcaatgcctccaaat
gagacttgtactgtaaaaggaatcactttgcatgacgaacctgttgattgggctgcagca
ggagatcatgttagtcttactttggttgggatggatatcatcaaaatgaatgttggctgc
atattttgtggccccaaagaacccattagagcttgtatgcgtttcagagcccgaatcctc
atctttaacattgaaattccaatcactaaaggatttcctgtgctgttacactaccaaact
gtcagcgaacctgctgtgattaaacgcttgatcagcgtcctgagcaaaagcaccggtgaa
gtcacaaagaaaaagcccaagtttttgactaaaggtcagaatgcattggtagaactacag
acacaaagaccaatagcccttgagctgtacaaggactttaaagagctgggcaggtttatg
ctacgctacagtggttccacaatagctgctggagtcgtcacggagataaaagaatga
DBGET
integrated database retrieval system
