Ochotona curzoniae (black-lipped pika): 121146188
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Entry
121146188 CDS
T11174
Symbol
SHPRH
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocz04121
]
121146188 (SHPRH)
Enzymes [BR:
ocz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121146188 (SHPRH)
Ubiquitin system [BR:
ocz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121146188 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-2nd
SHPRH_helical-1st
Linker_histone
Helicase_C
zf-RING_UBOX
PHD
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
TPR_10
SfNPV_sf27
TPR_12
TPR_16
FNIP_M
PEP-utilisers_N
TPR_2
Motif
Other DBs
NCBI-GeneID:
121146188
NCBI-ProteinID:
XP_040821456
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
MSSRRKRALPVKVDEEKQQQLRWNMHEDRRDEPLTLTHDEHPCPSSGSRPPQGILLEDSL
EKEGAPRDAERCPAAGRPSKSAAKEGTVSLDSSVAVKLNIVVSPHNADDSWKVLLGELTL
HLPPEQSLSENFSERSFTLMSSEWSNQFWMYIHSESENVENEKKNLKEPVTTDGKGILVE
SSFSNDMLEDLEWLQKKGRLRLYQRPEGNCCIKIGIYLLEAGLANLDYLSDANSRMKKFN
QLMKRVMEKLHNFVIPDVMEEEEEDTSESEPEGQDIDELYHFVKQTHQQEARSVQVDVQH
PALNPVLRPYQREAVKWMLQQERFRNTPADEHALHFLWREVITSDCWKIYYNPYTGCIIR
EYPNSGPQLLGGILADEMGLGKTVEVLALILTHTRQDVKQDALTLPEGKVVNYFVPSHCF
GGEAKDVGTQNTEFESKEKVHCPPTRVMILTAVKEMNGKKGVSILSIYKYVSSIYKYDVQ
RNRSLLKRMLKSLIFEGLVRQIKGHGFSGTFTLGKNYKEDNTWDKTKKQVIGSPKKNQKE
TRKSGNKDTDSEYLPSNTSDDDDDDDDDPYYYYYKARKNYNKLRKKPVFCTQKRKSQPKF
SPNSQDDCPATSDSAIMDVTMSESTWETKEESASPAPGGSAGPHSDSQGPRDASDYRFEC
ICGELNQTDWKARVQCLRCHLWQHAKCVNYEEKNLKIKPFYCPHCLVAMEPVSSRATLII
SPSSICHQWVEEINRHVKSSSLRVLVYQGVKKHGFLQPHFLAEQDIVIITYDVLRSELNY
VDIPHSNSEDGRRLRNQKRYMAIPSPLVAVEWWRICLDEAQMVECPTVKAAEMARRLTGI
NRWCVSGTPVQRGLEDLFGLVVFLGIEPYCVKHWWIRLLYQPYCKKNPQPLYSFIAKILW
RSAKKDVIDQIQIPPQTEEIHWLHFSPVERHFYHRQHEVCCQDAVVKLRKISDWALKLSS
LDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEEAHR
QLVCALNGLAGIHIIKGEYAAAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELLTA
KHPGIPPTLRDGKLEEEAKQLREHYMSKCNTEVAEAQQALQPVQQNIRELQRKIRMSSPW
WLNVIHRALEFAIDEELVQRVRNELTSNYKQQTDKLSMSEKFRDCRGLQFLLTTQMEELH
KFQKLVRDAVRNLEGPPSRSVIESATICHLRPVRLPLNCCVFCKADELFTEYESKLFSNT
VKGQTAIFEEMIEDEEGLVDDRAPTTTRGLWATSETERSMKAILSFAKSHRFDIEFIDEG
SIAMDLFEAWKKEYKLLHEYWMALRNRVSAVDELAMATERLRVRDPREPKPSPPVHHIIE
PQEVEQNRMKLLNDKAIATSQLQKKLGQLLYLTNLEKSQDRTSGGINPEPCPICARQLGK
QWAVLTCGHCFCNECVSIIIEQYSVGSHRSAIRCAICRQTTSHKEISYVFTSEKASQEED
IPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQIGRV
KTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVLLVEPILNPAHELQAIGRVHRI
GQTKPTIVHRFLIKATIEERMQAMLKTAERSHTNSAGKNSEASVLTVADLADLFTKETEE
HE
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgccggaaacgcgctctcccggtgaaggtggacgaagaaaagcagcagcag
ctccgctggaacatgcatgaggacagaagggacgagccgctcaccttaacccacgatgag
catccctgcccgagttcgggctctcgtcctcctcagggcatccttctagaagatagctta
gagaaagagggggctcccagggacgcggagaggtgtccagcagcagggaggccctccaag
tcagctgcgaaagaagggactgtcagccttgattcctccgtggctgtgaagttgaatatt
gtggtttctccccataatgctgatgattcttggaaagtattactgggcgaattaactctt
caccttcctccggagcaaagtttaagtgaaaatttttctgaaaggagttttacattgatg
agttcagagtggagcaatcaattctggatgtatattcattcagaaagtgaaaatgtagag
aacgaaaaaaaaaacctcaaagaacccgtcactaccgatgggaagggtattctagtggaa
tcatctttcagtaatgacatgttggaagatttagaatggctgcagaagaagggaagactc
agactttaccagagaccagaaggaaattgttgtatcaagattggaatttatcttttggaa
gctggtctagcaaatctagactatttgagtgatgcaaattcaagaatgaaaaagttcaat
caactcatgaaaagagtgatggaaaagttacacaattttgtgattccagatgtgatggaa
gaggaggaggaggacacttcagagagtgagccagagggacaagacattgacgaactctac
cactttgtgaagcagacacatcagcaagaagcacgatctgtccaggtggatgtccagcat
cccgccttgaaccctgtgttaagaccctaccagagagaggctgtcaagtggatgctgcaa
caagagcgtttcagaaacactcctgctgatgaacatgctctgcacttcttatggcgggaa
gttattacatcagactgttggaaaatatactataacccttatacaggctgcattatccgt
gagtacccaaattctgggccacagttgcttggtggaattttagcagatgagatgggtctc
gggaagacagtggaagttttggctctgattctgacgcatactcgacaggatgttaaacag
gatgctctcactcttcccgagggaaaagtagtaaattattttgttccatcacattgcttt
ggaggagaagcaaaagatgttggaacccagaatacggagtttgaatcaaaagaaaaagtt
cattgtccccctacccgtgtgatgattctgacagctgtgaaagaaatgaatgggaaaaaa
ggagtttctattctttccatctacaagtatgtcagttcaatatacaaatacgacgtccaa
cgaaataggagtcttctgaagcggatgctgaaaagcttaattttcgaaggtcttgtgaga
cagatcaaaggtcatggtttttctggaacttttacattgggaaagaattacaaggaagac
aatacatgggataaaacaaaaaaacaggtaataggcagtccaaagaaaaatcagaaagaa
accagaaaatcagggaataaggacacagattctgaatatttgccatcaaacacctctgat
gatgatgatgatgatgatgatgatccttattattattattataaagccaggaagaactat
aataaattgagaaaaaagcctgttttctgcacacaaaaaagaaaaagtcagcctaaattc
agtcccaattcccaagatgactgtccagcaaccagtgactctgcaataatggatgtgacc
atgtctgagagtacttgggaaacaaaggaagaaagtgcgtctccagcccctggtggcagt
gccgggccacactctgatagccaggggccccgagacgcctctgactaccgctttgagtgc
atctgtggtgagctgaaccaaacagactggaaggcgcgtgttcagtgcctgcggtgccac
ctgtggcaacatgccaaatgtgtgaattacgaagagaagaatctcaagattaagcctttt
tactgtccccactgcctggtagcaatggaaccagtatcttcaagagcaactctgatcatc
tcgccaagctctatctgtcaccagtgggtggaagaaatcaacaggcacgtgaaatcatcg
tcgcttcgcgtcttggtgtatcaaggagtgaagaaacatggttttttacagcctcatttt
ttggccgaacaggatatcgttatcattacctatgacgttcttcgttcagaactaaactac
gtcgatattcctcatagcaacagcgaggatggacggcgcctgcgcaaccagaagcgctac
atggccattcccagccccctggtggcggtggagtggtggaggatctgcctggatgaagct
cagatggttgagtgtccaacagtaaaagctgctgaaatggcccggcgtttgactgggatt
aaccgatggtgtgtcagtggcactccagttcagagaggattggaggatctttttgggtta
gtggtctttctgggcattgagccttattgtgtcaaacactggtggattcgacttctttat
cagccttactgcaagaagaaccctcagcccctctacagctttattgccaagatactctgg
aggtctgcgaagaaggatgtcattgaccaaatccagataccccctcaaactgaagaaata
cactggctccacttttctccagtggaacggcatttctatcatcgtcagcacgaggtttgc
tgccaggacgcggtggtgaagcttcgaaagatctccgactgggctctgaagctcagtagt
ctggaccgaaggactgtcacctccatcctctacccgctgctcaggctccggcaggcctgc
tgccacccgcaggccgtgcgcggggagttcttgccgctccagaaaagcaccatgaccatg
gaagagctgctgacatctctgcagaagaaatgtggaactgaatgtgaagaagcacatcgc
cagctagtttgtgccctcaatggcttagcaggcatccatatcattaaaggtgaatatgcc
gcggcagcagagctatacagagaagtgctgcgctcatctgaggagcacaaaggaaagctc
aaaactgattcacttcaaagacttcatgctacacataacttgatggaattgttgacggcc
aaacacccaggcatacctcctaccttacgagatggcaaactggaggaagaggccaaacaa
ctgcgagagcattatatgagcaagtgcaacacagaagttgctgaagcccagcaagcgtta
cagcctgtgcagcagaacatacgtgagctccaaagaaagattcgtatgagttctccttgg
tggctgaatgtgatacatagagcattggaatttgctattgatgaggaacttgttcagcga
gtgagaaacgaattaactagcaactacaagcagcaaactgacaagctttccatgtcagag
aagttccgcgactgcagaggtcttcagttcttacttaccacgcaaatggaagagctgcat
aaattccagaagctggtaagagacgccgtgagaaacctggaggggcctccgtctcggagc
gttattgaatctgcgacaatctgccatctccgacccgttagactccccctcaactgctgc
gtcttttgcaaagctgatgagttgtttacagaatatgaatcaaaactgttttctaacaca
gtcaaaggtcagacagcaatatttgaggagatgatagaagatgaagaaggactggtagat
gatcgagcacctaccaccacccgtggtctgtgggcaacaagcgagacagagcgatctatg
aaagcaatcctgtcatttgcaaaatcacatagatttgatattgaattcattgatgaagga
agtattgcaatggacctgtttgaagcatggaagaaggagtacaagttgcttcatgaatat
tggatggctcttagaaaccgcgtgtctgctgttgatgaactcgccatggccacagaacga
ctgcgagtgcgtgatccgagggagccaaagcccagtccgcctgttcaccatatcattgag
ccgcaggaggtagaacaaaatcgtatgaaactactaaatgataaagccattgctacgtca
cagcttcagaaaaaactgggccagcttctttatctgactaacttggagaagtctcaagac
agaacatcgggaggcattaatccagagccttgtcccatctgcgcccgacagctggggaag
cagtgggcagtactgacgtgtggacactgtttctgtaatgaatgtgtttctatcatcatc
gagcagtacagcgtggggtctcaccgcagcgccatcaggtgtgccatctgccgccagacc
acttcccacaaggaaatctcgtacgtcttcacctcggagaaagccagccaggaggaagac
atccccgtcaagggtagccattctacaaaggtggaagctgtggtgagaactctgatgaaa
atacagcttagggatccaggggccaaagcgctggtcttctccacgtggcaagatgtatta
gatattatttctaaagccctcactgacaataacatggaatttgcacagatcggtcgtgtt
aaaacatttcaggagaacctttcagcatttaaacgtgatccccaaatcaatattttgctg
ctgcccctgcacacaggctctaatggattaaccatcattgaagccacgcatgttctcttg
gtggagcccatactgaaccctgcccacgagcttcaggccatagggcgggtgcaccgaatt
ggacagacaaagcctactattgtacacagattcttaattaaagccacaattgaagaaaga
atgcaggcgatgctgaaaactgctgagcggagtcacacaaactcggccgggaagaactcg
gaggcctcggtcctgactgtcgccgacctcgcagacctgttcaccaaagagacggaagag
catgagtga
DBGET
integrated database retrieval system
