Ochotona curzoniae (black-lipped pika): 121147361
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Entry
121147361 CDS
T11174
Symbol
THAP9
Name
(RefSeq) LOW QUALITY PROTEIN: DNA transposase THAP9
KO
K23209
DNA transposase THAP9 [EC:2.7.7.-]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocz03036
]
121147361 (THAP9)
Chromosome and associated proteins [BR:
ocz03036
]
Eukaryotic type
Gene silencing
Transposable elements
121147361 (THAP9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THAP9_C
TNP-like_RNaseH_N
TNP-like_GBD
Tnp_P_element
THAP
TNP-like_RNaseH_C
Motif
Other DBs
NCBI-GeneID:
121147361
NCBI-ProteinID:
XP_040823116
LinkDB
All DBs
Position
Unknown
AA seq
872 aa
AA seq
DB search
MTRSCCAVGCSARDTVLNRRRGLSFHNFPTDTLMRSRWISAVNRVDPESGKIWLPGPTAV
LCSRHFQKSDFEIHGVRRKLRKDAVPSVYLHEPVPGIYLRGRARRKILRKPLPGESQEVA
IEDHNYSLKTHVAVDAEMLGEVQQMLRESRAGPVSWTNRRLLKKRRDLQLIDALVQEKLL
SEETEFLLRTQFSDFPWELHDWNNPANYSKEMKQFAGTLYLCGTTVYEYVRKILKLPHAS
VLRTWFSNWKLGPGFHSNSFSFLQRRAENGEQLYKYCSLIVKVTPLKQQLQWDPRSHSMQ
GFVDFGLGKLDADDMPLASETILLMAVGLFGHWRIPLGYFFVNKASGYLQAQLVRLTIGK
LSDTGITVLAVTSDATAHGIQVAKALGIRIDGNNMKCTFQHPSFASEEVAYFFDSCHLLE
LIRNTFQSLQTIRFKNGTARWQHLVELATLEDRELTSMERLPRELARLKQHILKPNCTAQ
IFSENVACALEYLLALGLPAFQNCTGTVRFLRIISNLFNIFNCRNFYGKGLRGPLSSKTY
SKINDALTEAKTIFTTLYDTSQNQIIEGKQKLGFLGFLLNAESLRWLYQSYIFPRLLPFP
YLMTYKFSQDHVELFLKMLIRQLANNTNLTCVTFQKAYHNLESKHRFPNEVFLNEISIFD
ISIARRKDLTLGTVQSQCGVREVTTVFHRAGICQDWSRCSLSAALLDLSTHKPDHNLCAT
YVANKLSTLLTCEDCVSALYASDLKAPKIGSLLCVKRKYGSYFPSESLCQVINICEQVVR
THSNMAVSHLGPNQREFYLQQKILYELLEHLSLFADLDKHLFDGDMCAINHFVKLLKDII
ICFLNIRDKNGVXGPLKHHSNRTKMRTISRKH
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaagctgctgcgccgtgggctgtagcgcccgggacaccgtgctgaaccggagg
cgcggcctctccttccacaattttcccacagataccctcatgcgctcaagatggatcagc
gctgttaaccgcgtagaccccgagagcggcaagatttggctcccaggaccaactgctgtg
ctgtgctccagacattttcaaaaaagtgactttgaaatacatggcgtccgcagaaagctg
aggaaagacgccgtgccctctgtttatctgcacgagcctgttccaggtatataccttaga
ggtagagcaagacggaaaatcctgagaaagccccttccgggtgagtctcaagaggttgct
attgaggaccataattatagtttaaagacgcacgtggcagtagatgcggagatgctgggt
gaagtgcagcaaatgctacgggagtcccgagcaggacctgtctcttggacaaaccgcagg
ctgctcaagaagagaagggatttgcagctgatcgatgcacttgtgcaagagaaactactt
tctgaagaaacagagtttctgctacgaacacagttttcagatttcccttgggagctgcat
gactggaacaacccagctaattactctaaagaaatgaaacaatttgctggtacactctac
ctgtgcggtacaacggtctatgagtacgtgaggaagatcctgaagctgcctcatgcttct
gtcctcaggacatggttttccaactggaaactcggtccaggtttccacagcaacagcttt
tctttccttcaacgaagagcagagaatggagagcagctgtacaaatactgttcactgatc
gtaaaggttacccctctcaagcagcagctccagtgggatcccaggagccacagtatgcaa
ggttttgtggatttcggccttggcaaactggatgctgatgacatgccacttgcctcagaa
acgattttgctcatggcagtggggctttttggtcattggagaatccctcttggctacttt
tttgtcaacaaagcatctggctacttgcaagctcagctggtccgtctgactattggcaaa
ttgagcgacacagggatcacagttctggccgtgacgtccgatgccacagctcacggcatt
caagtggcgaaagccttggggatacgtatcgacggcaacaacatgaagtgtacgtttcag
catccctcatttgccagcgaggaggttgcatacttctttgattcttgccacttgcttgaa
ttaataagaaacacatttcagagtttgcaaaccattcggtttaaaaatggcacagcacga
tggcagcaccttgtcgagttagcgacactagaggaccgggagttaacaagtatggaaaga
ctcccaagggaacttgcaagactgaagcagcacatactcaaaccaaattgtactgcccag
atcttcagtgagaatgttgcctgtgcattagaatatctgttggccctaggcctgcctgct
tttcagaactgcactgggactgtccggtttctacgtataattagcaatctgtttaacatt
tttaactgcaggaacttttatgggaaaggacttagaggacccctgtcctccaaaacttat
agtaaaataaatgatgcattaacagaagccaagactattttcactacgttatatgacact
agtcagaatcagatcatcgaagggaagcaaaagctgggattcctgggatttttgcttaac
gcagagagcctaagatggctctaccaaagttatattttcccaagactcctgccttttcca
taccttatgacttacaaattcagtcaggatcatgtggaactatttttgaagatgcttatt
aggcagttagccaacaatactaatctcacctgtgtgacattccaaaaggcttaccataac
ctagagagcaaacacagatttccaaatgaagtgttcctaaatgaaataagcatcttcgac
atttccatcgcacgaaggaaagacttgaccctggggacggtgcaaagtcagtgtggagtc
agggaggtgacgacagtcttccacagagcgggcatttgccaagactggtcccgctgctcg
ctgagcgcagcgttgctggacctttccactcataagccagatcacaatttgtgtgccacc
tatgttgccaataaactatccactcttttaacttgtgaggattgcgtcagtgccttgtat
gcctcagacctcaaggctcctaaaattgggtccctgttatgtgttaaaaggaagtatggt
tcctattttccttcagaaagcctgtgtcaggtcataaatatctgcgagcaagttgtaaga
acccattcaaacatggcagtttcgcacctagggcctaatcaaagagaattttaccttcaa
cagaaaatactatacgaacttttggagcatctctctctctttgcagatttagataagcat
ctctttgatggagacatgtgtgccattaaccactttgtgaaattgctgaaggatataata
atctgtttcttaaatatcagagataaaaatggggtttgaggccctttgaaacatcattca
aacagaactaaaatgagaaccatatcaaggaaacactga
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