Ochotona curzoniae (black-lipped pika): 121147365
Help
Entry
121147365 CDS
T11174
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121147365 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocz04990
]
121147365 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
ocz04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121147365 (PDLIM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121147365
NCBI-ProteinID:
XP_040823122
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQANVRIGDVVLSIDGISAHG
MTHLEAQNKIKGCTGSLNMTLQRASATTKPEPVPVQKGEPKEVVKPVPITSSAVSKVTST
TNMTYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPPPVAAVTPPPFSASGLH
ASTSLSADQCSSALSTGKTAVNVPRQPTVTSVCSETAQELAEGQRRGSQGDIKQQNGPPR
KHIVERNTEFYHIPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEHLKESEA
DNTKKANSTQEPLQQSVPPAASPRSAGEPLESSASGRAGVAGLTTAAAFKPVAATGVIKS
PSWQRPSQAAPSTGKISSNVASSGPGAPVGSAVGQPQPGDQDTLVQRAEHIPAGKRTPMC
AHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPECV
RCQKKILGEVINALKQTWHVSCFVCVACGNPIRNNVFHLEDGEPYCETDYYALFGTICHG
CEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSVNF
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactatagcgtgtccttggttggcccagctccttggggtttccggctgcaaggc
ggcaaggatttcaacatgcctctgacaatctctagtctaaaagatggaggcaaggcatcc
caagcaaacgtgaggataggcgatgtggtcctcagcatcgatggaataagtgcacatggg
atgactcatctggaagcccagaacaagattaagggttgcacgggctctttgaacatgact
ctacagagggcatcagccacaaccaagcctgagccagttcctgttcaaaagggagaacct
aaagaagtagttaagcctgtgcccattacatcttctgctgtgtccaaagtcacttccaca
accaacatgacctacaataaggcaccacgaccctttggttctgtgtcttcaccaaaagtc
acatccatcccatcaccatcgtctgccttcaccccagcccatgcaaccacttcatcccat
gcttcccctccacctgtggctgctgtcactcctcccccattctctgcatctggactgcat
gctagcaccagtctcagtgctgaccagtgttcctctgcgctgagcactggtaaaactgca
gttaatgtcccacggcagcccacagtcaccagcgtgtgttccgagactgctcaggagcta
gcagaggggcagagaagaggatcccagggtgacattaaacagcaaaatggtccaccgaga
aaacacattgtggagcgcaatacggagttttatcacatacccactcacagtgatgccagc
aagaagagactgattgaggatactgaagactggcgcccacgcactgggacaacccagtcc
cgttccttccgaatcctcgcccagatcaccgggacggagcatctgaaagaatctgaagct
gacaatacaaagaaggcaaatagcacccaggagcctcttcagcagtcagttcccccggca
gcttcgccgcggagtgcaggagagcccttggagagctcggcctcgggcagagcgggtgtg
gccggcctcaccacggctgccgccttcaagcccgtggctgccaccggtgttatcaagtca
ccaagctggcagcgcccaagccaagcagcaccttccactggaaaaatctcaagcaatgtg
gcttcctcaggcccaggggccccagttggctccgctgtgggtcagccccagccgggcgac
caggatacgttagtgcagagagcggagcatatccctgcaggaaaacgaaccccaatgtgt
gcccactgtaaccaggtcatccggggcccattcctggtcgcactggggaaatcctggcat
cctgaagaatttaactgtgctcactgcaaaaataccatggcctacattggatttgtagag
gagaaaggggccctgtattgtgagctatgctatgagaaattctttgctcctgaatgtgtt
cgatgccaaaagaagatccttggagaagtcatcaatgctttgaaacaaacttggcatgtt
tcttgttttgtctgtgtggcctgtggaaacccaattcgtaataacgtttttcacttggag
gatggtgagccctactgtgagactgattattatgccctctttggcaccatctgccatgga
tgtgaatttcccatagaggctggcgacatgttcctggaagctctgggttacacctggcat
gatacttgctttgtatgctcagtgtgttgtgaaagtttggaaggtcagacatttttctcc
aagaaggacaagccactttgcaagaagcatgctcattcagtgaatttttga
DBGET
integrated database retrieval system
