Ochotona curzoniae (black-lipped pika): 121147798
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Entry
121147798 CDS
T11174
Symbol
CARMIL1
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocz04131
]
121147798 (CARMIL1)
Membrane trafficking [BR:
ocz04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
121147798 (CARMIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Muted
IL34
Cep57_CLD
Spectrin_5
Motif
Other DBs
NCBI-GeneID:
121147798
NCBI-ProteinID:
XP_040823636
LinkDB
All DBs
Position
Unknown
AA seq
1370 aa
AA seq
DB search
MSEESTDVPRELIESIKDVIGRKIKIAVKKKVKLEVKGDKVENRVLVLTSCRAFLLTARI
PTKLELTFSYLEIQGVICNKPAQMVVETEKCTISLKMATPEDVSDVLAHIGTCLRKIFPG
LSPVRIMKKVCMEPSERLASLQALWDSQTVAEQGPCGGFSQMYACVCDWLGFSYREEVQW
DVDTIYLTQDTRELNLQDFSHLDHRDLIPIIAALEYNQWFTKLSSKDLKLSADVCEQILR
VVSRSNRLEELVLENAGLRTDFAQKLASALAHNPNSGLHTINLAGNALEDRGVSSLSIQF
AKLPKGLKHLNLSKTSLSPKGVNSLSQSLSANPLTASTLTHLDLSGNILRGDDLSHMYNF
LAQPNAITHLDLSNTECSLDMVCGALLRGCLQYLAVLNLSRVVFSHRKGKEVPPSFKQFF
SSSLALVHINLSGTKLSPEPLKALLLGLACNHSLKGVSLDLSSCELRSGGAQVLEGCIAE
IHNITSLDISDNGLESDLSTLIVWLSKNRSIQHLALGKNFNNMKSKNLTPVLDNLVQMIQ
DEESPLQSLSLADSKLKTEASIIINALGSNTSLTKVDISGNAMGDMGAKMLAKALQINTK
LRTVIWDKNNITAQGFQDIAVAMEKNYTLRFMPIPMYDASQALKANPEKTEEALQKIENY
LLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRICVKVQDHLNSLRNCGGEAIQEDLKSA
ERLMRDAKNSKTLLPNLYHVGGASWAGASGLSSSPIQETLESMAGEVTRVVDEQLKAALE
SMVDAAENLCPNVMKKAHIRQDLIRASTEKISIPRTFVKNVLLEQSGIDILNKISEVKLT
VASFLSDRIVDEILDALSRCHHKLADHFSRRGQTLAQQDSFEMEVAEEKPVKRSILTVED
LTEVERLEDLDTCMMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEEVPIHIEDPPFPC
VRPEKRSSAFISELPSEEGRKLEHFTKLRPKRNKKQQPTQAAVCAASVVPQDGDQNGLMG
RVDEGVDEFFTKKVTKMDSKKWSSRGSESHELGEGDEKKKRDSRKSGFLNLIKSRSKPER
PPTVLMGEEPSSPKGAGRSAVDSPRKDARAAEHNGTPERTEELKTPDSLEEGQGEETARA
ERSDSKSSPQGGRRYGVQVMGSGLLAEMKAKQERRAASAKKLGNDAFCQEPSSPAFSSTE
RLDGAGAVPKLHPGLPENRFGLGTPERNPRAEPRAEMGPRSRSLSGTPTSHQPPLQSPKP
SLVARPTIPQKPRSSSRPEDIPDSPSGPSSPKVALLPPVLKKVPSDKERDGQSSPQPSPR
TFSQEVSRRSWGQQPQEHQQPKQRPSSRDGRHGSKSSDSGEEAEKEFIFV
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggagagcaccgacgtcccccgggagctgatagaaagcataaaggatgttatt
ggcagaaagataaaaattgcagtcaagaagaaagtaaagttggaagttaaaggagacaaa
gttgaaaaccgagtgctggtgctcacatcatgccgtgccttcctgctgactgcacgtatc
cccaccaagctcgagttaaccttcagctacttggagatccaaggtgttatttgcaacaag
cctgctcagatggttgtggaaacggagaagtgcaccatctccctgaagatggcaacgccg
gaggacgtgagtgacgtgctggcacacatcggcacctgcttgcggaagatatttcctggc
ctctctccagtgaggatcatgaagaaagtctgcatggagccgtctgagcgcctggccagt
ctccaggccctgtgggacagccagaccgtggctgagcagggcccctgcggtggattttct
caaatgtacgcctgtgtctgtgactggctggggttttcatacagggaagaagtgcagtgg
gatgtggataccatttatctgacgcaagacaccagggagttgaacttacaagacttcagt
catctggaccacagagacctcatccccatcatcgctgctttggagtacaaccagtggttc
accaagctgtcctccaaggatctgaaactctctgcggatgtctgcgaacagatccttagg
gtggtgagtagatccaatcgactggaagaattggtgttggaaaatgctggacttagaaca
gattttgcacaaaaactggccagtgcgctcgcacataatcccaactcaggactccacacg
attaaccttgctggcaacgcactggaggatagaggtgtgtcctctttaagtattcaattt
gccaaactccccaagggattaaaacatttaaatttgtctaaaacctcattatcacctaaa
ggggtgaatagcctttctcagtcactcagtgccaaccctctgactgcctccaccctcacc
catctagacctctcagggaacatccttcgcggagacgacctctcgcacatgtataatttt
ttggctcagccaaatgccatcactcatctggatttatccaacacggaatgttccctggac
atggtctgtggagctcttctccgtggatgccttcaatatttagctgttctcaatctctcc
agagtcgtcttctctcaccggaaaggaaaagaagtacccccatctttcaagcagtttttt
agcagttctctggctttggtgcacatcaacctttcaggcacaaaactgtctcctgagccc
ttaaaagcgttgctgttgggcctggcttgtaatcatagtctgaagggggtttctcttgac
ctcagcagctgtgagctgaggtcaggaggtgctcaagtcttagaaggctgcattgctgaa
atccacaatatcaccagcttagacatctctgacaatggtttggaatctgacctctctacc
ttaattgtgtggctcagtaaaaacagatctatccaacatctggccttaggcaaaaatttt
aacaatatgaaatccaaaaatctgacacctgtattggacaacttagtacagatgattcaa
gatgaagaatcccctctgcagtccttgtccctggctgactcgaaactcaagactgaggcc
agcatcatcatcaacgccctgggaagcaacacctcgctgaccaaagtggacatcagtggg
aatgcaatgggagacatgggagcgaagatgctggcaaaagccctgcagatcaataccaag
ctcaggactgtaatctgggacaagaacaacatcactgcacaaggcttccaagacatagct
gttgctatggaaaagaactacacactgcgatttatgcccattcccatgtacgatgcttcc
caggccctaaaagcaaaccctgagaaaacagaagaagctctgcaaaagatagaaaactat
ttgctacggaatcacgagaccagaaaataccttcaggagcaggcctaccgcctacagcag
ggtattgtcaccagcaccacccagcagatgattgacaggatatgtgtgaaagttcaagat
cacctcaactccttacggaactgcgggggagaggccattcaggaagacttgaaatctgca
gaacggctcatgcgtgatgctaagaactccaagacgctattaccaaacttataccatgtt
ggtggtgcgtcctgggcaggagccagtggcttgtcatccagtccaatccaggagaccctg
gaatccatggctggagaagtcacgagagttgtggatgaacaactaaaggctgcgctcgaa
tccatggtggacgctgccgagaacctttgtcccaatgtgatgaaaaaggcccacatccga
caagacctgattcgtgccagcactgaaaagatttccatcccacgtacctttgttaaaaat
gtcctgttggagcagtctggaattgatatccttaacaaaattagtgaggtgaagctgact
gtggcctccttcctgtctgatcgaattgtggacgaaatcctggacgcactctcacgttgt
catcataagctggctgaccatttcagcaggcgtggccagacgcttgcccagcaagactcc
tttgagatggaggtggctgaggagaagccggtgaagcgctccatcctcacagtggaggac
ctgactgaggtggagcgcctggaagatctggacacctgcatgatgactccaaaatccaaa
aggaagagtatccacagccgaatgctgcgacccgtatccagggcctttgaaatggagttt
gatctggataaagccctggaagaagtgcccatccacatcgaagacccgcctttcccatgc
gtcaggccagagaagcgcagctcggctttcatctctgagctgccctcggaagagggcagg
aagctggagcattttaccaagttaaggcccaagaggaataagaagcagcagcccacccaa
gctgcggtctgtgctgccagcgtggtcccccaggatggtgaccagaacggtcttatgggg
agagtcgatgaaggtgtagatgagtttttcaccaagaaggtgaccaaaatggattccaag
aaatggtcaagcagagggtctgagtcccatgagcttggtgaaggcgatgaaaagaagaag
cgagattctcgaaaaagcggctttctcaatttaatcaaatcccggtccaaaccggaaagg
cctcctaccgtgctaatgggggaagagccctcctcccccaagggggcaggccgaagtgcg
gtggacagcccaaggaaggacgccagggcggcggagcacaacggcactccagagcggacg
gaagagctcaagaccccggattccctggaagaaggtcaaggggaagaaacagcgagggcg
gagcgcagcgacagcaagagcagcccgcagggcgggcggaggtacggcgtgcaggtgatg
ggcagcgggctgctggccgagatgaaagccaagcaggagaggagagctgcctcggccaag
aaacttggaaacgacgccttctgccaggagccttccagtccagccttcagcagcacagag
cggttggatggagccggggccgtgcctaaactgcacccaggtcttccagagaaccgcttc
ggtttgggaacaccggaaaggaacccgagagccgagcccagggcggagatgggcccaagg
tctcgcagcctgtcgggcacaccgacgagccaccagcccccactgcagtcgcccaagccc
agcctggtcgcgcggcccaccatcccgcagaaacccaggagctcctctcggcctgaggac
atcccagactctccatctggccccagctcccctaaagttgctctacttccacctgtcctg
aaaaaagttccttcagacaaggagagagatggccagagtagcccccagcccagccccagg
acgttttcccaggaagtgtcaaggagaagctggggccagcagccccaggaacatcaacag
ccaaagcagcggccctccagccgagacggccgtcatggcagcaagtccagtgactccgga
gaagaagcagagaaagagttcatctttgtgtaa
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