Ochotona curzoniae (black-lipped pika): 121147814
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Entry
121147814 CDS
T11174
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121147814 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocz04121
]
121147814 (NHLRC1)
Enzymes [BR:
ocz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121147814 (NHLRC1)
Ubiquitin system [BR:
ocz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121147814 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
Baculo_IE-1
Prok-RING_4
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
121147814
NCBI-ProteinID:
XP_040823658
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MGAEASEGRPALRELLREAEISLLECKVCFERFGHRQQRRPRNLPCGHVVCLACVAALAH
PRTLALECPFCRRACRGCDTSDCLPVLHLLELLGSALRPSPAVPRAAAAAACAPGALTCQ
HSFGGWGTLVNPTGLALCPKTGRVVVVHDGKRRVKVFDSGGGCAHQFGEKGDAAQDVRYP
LDVTVTNDCHVVITDAGDRSVKVFDFFGQVKLVVGGGRFSLPWGVEITPQNGVVVTDAEA
GALHLLKVDFAEGVLRGTQRLQAALCSPRGVAVSWLTGAIAVLEHPAGGSTRVKVFGSRM
QLLGQVDTFGLSLFFPSQVTASAVTFDHQGNVVVAETSGAAILCLGKPEEFPVVKPMVTQ
GLCRPVALAFTKENSLLVLDAASHSVKVYKVDWG
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgaggcctcggagggccggccggcgctgcgggagctgctgcgcgaggccgag
atcagcctgctcgaatgcaaggtgtgctttgagaggttcggccaccggcagcagcggcgg
ccgcgcaacctgccctgcggccacgtggtctgcctggcctgcgtggccgccctggcgcac
ccgaggacgctggccctcgagtgtcccttctgccggcgagcctgccgcggctgcgacacc
agcgactgcctgccggtgctgcacctgctggagctgctgggctccgcactgcgcccgtcg
cccgccgtcccccgcgccgccgccgccgcagcctgcgcgcccggggccctcacctgccag
cactccttcggcggctggggcacgctggtcaaccccacggggctggcgctgtgccccaag
acggggcgggtggtggtggtgcatgacggcaagaggcgagtcaaggtctttgacagcggg
ggagggtgcgcccaccaatttggggagaagggcgacgctgcgcaagacgtcaggtacccc
ctggatgtcaccgtcaccaacgactgccacgtggtgatcaccgacgccggcgaccgctcc
gtcaaggtgttcgattttttcggccaggtcaagctcgtggtcggaggtggccgcttctcg
ttgccctggggggtggagatcacccctcagaacggggtggttgtgaccgacgccgaggca
ggggcgctgcacctcctgaaggtggactttgcggaaggcgtcctccgtggcacgcagagg
ctgcaggcggctctctgcagcccccgcggggtggccgtgtcctggctcaccggggccatc
gcggtgctggagcatcctgctggcggcagcaccagggtcaaagtgttcggctccaggatg
cagctcctcggacaggtggacaccttcgggctgagcctcttcttcccctcccaagtaacg
gcttcggcggtcaccttcgatcaccaggggaatgtggtcgtggctgagacctctggggcc
gccatcctatgcctgggaaaacctgaggagttcccggtggtgaagcccatggtcactcag
gggctttgccgtcctgtggccctggccttcaccaaagagaattctctcctggtgctggac
gcagcatcccattctgtgaaggtctacaaggttgactgggggtga
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