Ochotona curzoniae (black-lipped pika): 121148448
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Entry
121148448 CDS
T11174
Symbol
THSD4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121148448 (THSD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocz04990
]
121148448 (THSD4)
Domain-containing proteins not elsewhere classified [BR:
ocz04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
121148448 (THSD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
ADAMTS_CR_3
PLAC
TSP1_CCN
TSP1_spondin
NPAT_C
Motif
Other DBs
NCBI-GeneID:
121148448
NCBI-ProteinID:
XP_040824419
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MANPAVASRGSGPRMSPIRVLGSILLLGFPLVCPQPSTDHRKVPQRMAAAAEGDAEDDGG
GSPGIWGTWGPWSACSRSCSGGVKEQTRPCLPGSARTPARAFTGRVLSAVRTSVPLHRSR
QELRAAPSSDAAGVQGPASLRGSRHSQARGGGTPTERRGRTQGAIGPGRYGYGKAPYIFP
LQTDSAHTLQRLRRQRPPSRQARAQDVPVPRTGYGPAAQQLSHHGSGGHGDHGPRSGLQA
AKASSYQLPLTHNQGFPMASSFFQSSERSSGSHGAGAPGVAQSLSQPSRSMAISCIGSYR
QYKLCNTQACPESSRSIREVQCASYNNKPFMGRFYEWEPFAEVKGDRKCELNCQAMGYRF
YVRQAEKVIDGTPCDQNGTAICVSGQCKSIGCDDFLGSDKVVDKCGVCGGDNSGCQVVSG
VFKRALSSLGYHRVLEIPQGATKINITEMHKSNNYLALRSRSGRSIINGNWAIDRPGKYE
GGGTMFTYKRPNEISSTAGESFLAEGPTNEILDVYMIHQQPNPGVHYEYVIRDANTISPQ
VPPLRRPGQPFNGQLVKEDGRQDEGAEERSQETQDTGAEVPETLATGSAQAFPGRQPERF
ASHHPDQPVPAAPQPPRRSRSHTWKQLGTTECSATCGKGSQSPIFRCVHRSTHEEAPESY
CDASMKPSPEAEPCNIFPCPAYWDIGEWSQCSKTCGLGMQHRQVLCRQVYANRSLTVQPY
RCQHLERPETTSTCQLQICSEWHIRADWTSCSVPCGVGQRTRDVKCVSNIGDVVADEECN
MKLRPSDIENCDMGPCAKSWFLTEWSERCSAECGAGVRTRSVVCMANHVSSLPLEGCGDN
RPAEATPCDNGPCTGKVEWFAGSWSQCSVECGPGTQQREVICVRKNADAFEVLEPYACAF
LERPLSRQPCHLKPCGATWFSTEWSMCSKSCQGGFRVREVRCLSDDMTLSNLCDPQLKPE
ERESCNPQDCVPEVDENCKDQYYNCNVVVQARLCVYSYYETACCASCTRGAQRQTSFLGS
R
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccctgcagtggcctcccgtggatctggacccagaatgtctccaatcagggtc
ctgggctccatcctgctgcttgggttcccgcttgtctgcccacagccctctactgaccac
agaaaggtcccacagcggatggcggcggcggctgagggcgacgccgaagatgatggtggc
ggctctcccggcatatggggtacctggggtccctggtctgcctgctctcgcagctgcagc
gggggcgtgaaggaacagacgcggccctgcctgcctggctctgcccgcaccccagcgaga
gccttcacgggccgcgtgctgtcagctgtgcgcacgtcggtgcctctacaccggagccgc
caggagctgcgcgccgcgcccagctctgacgctgctggcgtccaagggcctgcctcactg
cggggcagccggcactcccaggcccgcggcggcggaaccccaacggaaagaaggggcagg
actcagggtgccatcggccccggacggtacggctatggcaaagccccatacatcttcccg
ctgcagacagactccgcacacacactccagaggctgcggaggcagagacccccatcccgg
caggccagggcccaggatgtaccggttcccaggactggttatggccctgcagcccagcag
ctctcccatcatggttctggtggccatggtgaccatggccctcgctctgggctgcaggca
gccaaggcttccagctaccagctgcctctgacccacaaccagggcttccctatggcctcc
agtttcttccagagctcggagaggagcagtggcagccatggtgcaggggctcctggtgtg
gctcagagcttgtcccagccttcacgctccatggccatctcctgcattggttcctaccgg
cagtacaagctatgcaatacccaggcatgtccagagagcagcaggagcatccgggaggta
cagtgtgcatcctacaacaacaagccattcatgggacgcttttatgagtgggagcccttt
gcagaagtgaagggtgaccgcaagtgtgaactgaactgccaggccatgggctaccgcttc
tatgtccggcaagctgagaaggtcattgacggcacaccctgtgaccagaacggcacagcc
atctgtgtgtctgggcagtgtaagagcatcggatgcgatgacttcctgggatcagacaaa
gtggtggacaaatgtggagtgtgcggtggagacaactcgggctgccaggtggtgtcgggt
gtgttcaagcgcgcactgtccagcctgggctaccaccgcgtcctggagattccccaagga
gccacaaaaatcaacatcaccgagatgcacaagagcaacaactatctagccctgcggagt
cgctccggccgatccatcatcaacggaaactgggccattgaccggcctgggaaatacgag
ggtggaggaaccatgttcacctacaagcgccccaacgagatctcgagcactgctggggag
tccttcctggccgaagggcccaccaacgagatcttggacgtctatatgatacatcagcag
cccaaccctggagtgcactacgagtatgtcatccgggatgccaacaccatcagcccacag
gtgccacccctcaggaggccagggcagccgttcaacgggcagctggtgaaggaagatggg
aggcaggacgagggggcagaggagaggagccaggagacgcaggacacgggtgccgaggtg
cctgagacactggccacaggatcagcccaggccttccccggcaggcagcctgagaggttc
gcctcccaccatcctgatcagccagtcccggcagccccgcagccgcctcggcgcagccgg
agtcacacctggaaacagctgggaacgacggagtgctcggccacctgtgggaaaggatcc
cagtcacccattttccgctgtgtgcacagaagcacgcatgaggaggcgcccgagagctac
tgcgacgccagcatgaagccgagccctgaggcagagccgtgcaacatcttcccctgcccg
gcctactgggacattggcgagtggtcacagtgcagcaagacctgcggcctcggcatgcaa
caccgccaagtgctgtgccgccaggtgtatgccaaccgcagtctcacggtgcagccctac
cgctgccaacacctggagcggcctgagaccaccagcacctgccagctccagatctgcagc
gagtggcacatccgggccgactggacctcgtgctccgtgccctgtggcgtgggccagcgg
acccgtgacgtaaagtgtgtgagcaacatcggggatgtggtggccgatgaggagtgcaac
atgaagctgcggcccagcgacattgagaactgcgacatgggaccttgtgccaagagctgg
ttcctcaccgagtggagcgagcggtgctcagcggagtgcggggctggagtacggacgcgc
tcggtggtatgtatggccaaccacgtcagcagcctgcccctggagggctgtggggacaac
cggccagcggaggccacaccctgtgacaacggaccctgcacgggcaaggtggaatggttt
gcagggagctggagccagtgctccgtggagtgtggccctgggacacagcagagggaggtg
atctgtgtgaggaaaaacgcagacgcctttgaagtgctggagccctatgcgtgcgccttc
ctggagcggcccctgagccggcagccgtgccacctcaagccatgtggtgccacgtggttc
agcaccgagtggagcatgtgctccaagagctgccagggtggcttccgagtccgggaagtg
cggtgcctgtcggatgacatgaccctaagcaatctctgtgacccacagttgaaaccggaa
gagagggagtcctgtaacccccaggactgcgtccctgaagttgatgagaactgcaaggac
cagtactacaactgcaacgtggtggtgcaggcgcgcctgtgtgtctacagctactacgag
actgcctgctgcgcctcctgcacgcggggagcccagcggcaaaccagcttcctggggagc
agataa
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