Ochotona curzoniae (black-lipped pika): 121148537
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Entry
121148537 CDS
T11174
Symbol
SEMA6D
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
121148537 (SEMA6D)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
121148537
NCBI-ProteinID:
XP_040824541
LinkDB
All DBs
Position
Unknown
AA seq
1086 aa
AA seq
DB search
MRFFLHCAYMLLLMVSPLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYIAGRDQVYTVNLNEIPKTEVIPSKKLTWRSRQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLNTLEYDGEEISGLARCPFDAKQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED
KVPKPRPGCCAKHGLAEEYKTSIDFPDETLAFIKSHPLMDSAVPPIADEPWFTKTRVRYR
LTAIAIDHSAGPYQNYTVIFVGSEAGIVLKVLAKTSPSSLNDSVLLEEIEAYNHAKCNAE
NEEDKKVISLQLDKDHHALYVAFSSCVIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGT
CGRVTPGMLLLTEDFFAFHNHSTGGYEQDAEYGNTAHLGDCHEILPTSTTPDYKIFGGPT
SDMEVFSSSVTAMANIPEITPKVSDTWRPKLTSSRKFVVQDDPNTSDFTDPLSGIPKGVR
WEVQSGESNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAESAQSC
TDSSGSFAKLNGLFDSPVKEYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRGQPPE
LAALPTPESTPVLHQKTLQAIKSHSEKAHGHGVSRKEAPQFFPSSPPPHSPLSHGHIPSA
IVLPNATHDYNTSFSNSNAHKAEKKLQHVDHPLSKSSSKRDHRRSVDSRNTLNDLLKHLS
DPNSNPKAIMGDIQMAHQTLMLDPVGPMTELPPKVPNREASLYSPPSTLPRNSPTKRVDV
PTTPGVPMTSLERQRGYHKNSSQRHSISAMPKNLNSPNGVLLSRQPSMNRGGYMPTPTGA
KVDYIQGTPVSVHLQPSLSRQSSYTSTGTLPRTGLKRTPSLKPDVPPKPSFVPQTTSVRP
LNKYTY
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcttcctacattgtgcttacatgttgctcctaatggtatcaccactgagggca
gtcagctttcctgaagacgatgaaccactaaacacagttgactatcactattcaaggcaa
tatccggtttttagaggacgcccttcaggcaatgaatcgcagcacaggctggactttcag
ctgatgttgaaaattcgagacacactttatattgctggcagggatcaagtttatacagta
aacttaaatgaaatccccaaaacggaagtaataccaagcaagaagctgacatggcggtca
agacaacaggatcgagaaaactgtgctatgaaaggcaaacacaaagatgaatgtcataac
tttatcaaagtatttgttccaagaaatgatgagatggtttttgtttgtggtaccaatgca
ttcaatcccatgtgtcgatactataggttgaataccttagagtatgatggggaagaaatc
agtgggctggcaagatgcccatttgatgccaaacaaaccaatgttgccctttttgctgat
gggaagctatattctgccacagtagctgacttcttggccagtgatgctgttatttatcga
agcatgggtgatggatctgcgcttcgcacaataaaatacgattccaaatggataaaagaa
ccacactttcttcatgctatcgaatatggaaactatgtctattttttctttcgagaaatt
gctgtggaacataataacttaggcaaggctgtgtattcccgtgtagcccgcatatgtaaa
aatgacatgggtggctcgcagcgggtcctagagaaacactggacctcgtttctgaaggct
cggcttaactgttccgtccctggggattcattcttctactttgacgttctgcagtccatt
acagacataattcagatcaacggcattcccactgtggttggtgttttcactacccagctc
aacagcattcctgggtcagcagtctgtgcgtttagcatggatgacatagaaaaagtattc
aaaggacgattcaaagaacagaagactccagattctgtttggaccgcagtccctgaagac
aaagtaccaaagcccaggcctggctgttgtgcaaaacatggccttgctgaagaatacaaa
acctccatcgacttcccggatgagacactggccttcatcaaatcccaccccctgatggac
tcagctgtcccacccattgctgatgagccttggttcacaaagacgcgggtcaggtacaga
ttgacagccatcgccattgaccactccgctgggccctaccaaaactacacagtcatcttc
gttggctctgaagctggcattgtgcttaaagttctggcaaaaaccagcccctcctctttg
aatgacagcgtattactagaggagattgaagcttacaaccatgcaaagtgtaatgctgag
aatgaggaagacaaaaaggtcatctcattacagttggacaaagatcaccacgctttgtac
gtggcattctccagctgtgtgatccgcatccccctcagccgctgtgagcgttacggatca
tgcaaaaagtcttgcatcgcatctcgtgacccctactgtggctggttaagccagggaacc
tgtgggagggtgacccctggaatgctgctcttaacagaagacttctttgctttccataac
cacagcactggaggatatgaacaagatgcagaatacggcaacacagcccatctaggggac
tgccacgaaattttgcctacttcaactacaccagattacaaaatatttggcggtccaaca
tctgacatggaggtattttcatcttctgttaccgcaatggcaaatatcccagagattaca
cctaaagtgagtgatacctggagacctaaactgacgagctcccggaaatttgtagtccaa
gatgacccaaacacttctgattttactgatcctttatcaggtatcccaaagggtgttcgc
tgggaagtacaatctggagagtcaaaccagatggtccacatgaacgtcctcatcacctgt
gtctttgccgcttttgttttgggtgcatttattgcaggtgtggcagtctactgctaccgt
gacatgtttgttcggaaaaacaggaagatccataaagacgcagaatctgcccagtcatgc
acagactccagtggaagttttgccaagctgaatggcctctttgacagcccggtcaaggaa
tatcagcagaatattgattctcctaaactttacagtaacctgctgaccagccggaaagag
ctgccacccaacggagatactaaatccatggtgatggaccatcgtggccaacctcctgag
ctggccgctttgcctacgccagagtccacacctgtgcttcaccagaagaccttgcaggcc
ataaagagccactccgaaaaggcccatggccatggagtgtcaaggaaagaagcaccccag
tttttcccgtctagtcctcctccccattccccattaagtcatgggcatatccccagtgcc
attgttctcccgaatgcaacccatgactacaacacatcgttctcaaactccaatgctcac
aaagctgaaaagaagctccagcacgtggatcacccactcagcaagtcctccagcaaacga
gatcaccgacgctcagtggattccaggaatacactcaacgatctcctcaagcatcttagt
gatccaaacagcaaccccaaagccatcatgggagacatccaaatggcccaccagaccctc
atgctggatcctgtgggacctatgacagagcttcctccgaaggtccctaaccgggaggca
tccctgtattcccctccttccactctccccagaaatagccccaccaagagagtggatgtc
cccaccactcctggtgtcccaatgacttctctggaaagacaaagaggttatcacaaaaac
tcctcccagaggcactctatatctgctatgcctaaaaacttaaactcaccaaatggtgtt
ttgttatcgagacagcctagtatgaaccgtggaggctacatgcccacccccacgggagca
aaggtggactatattcaggggacaccagtgagtgtgcacctgcagccttctctctccaga
cagagcagctacaccagtactggcactcttcccaggacgggactaaagaggacaccgtcc
ttaaaacctgatgtgccaccaaagccttcctttgttcctcaaaccacatctgtcagacca
ctgaacaaatacacatactaa
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