Ochotona curzoniae (black-lipped pika): 121148588
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Entry
121148588 CDS
T11174
Symbol
RORA
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04659
Th17 cell differentiation
ocz04710
Circadian rhythm
ocz05017
Spinocerebellar ataxia
ocz05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
121148588 (RORA)
09159 Environmental adaptation
04710 Circadian rhythm
121148588 (RORA)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
121148588 (RORA)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
121148588 (RORA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocz03000
]
121148588 (RORA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ocz03310
]
121148588 (RORA)
Transcription factors [BR:
ocz03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121148588 (RORA)
Nuclear receptors [BR:
ocz03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
121148588 (RORA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121148588
NCBI-ProteinID:
XP_040824654
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Position
Unknown
AA seq
523 aa
AA seq
DB search
MESAPAAPDPAASEPGSSGADAAAGSRETPLNPESARKSEPPAAVRRQSYSSTSRGISVT
KKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRT
SRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHPQQPGEAE
PLTPTYNISANGLTELHDDLSNYMDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIK
PEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITW
QTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGS
LEVVFIRMCRAFDSQNNSVYFDGKYASPEVFKSLGCEDFISFVFEFGKSLCSMHLTEDEI
ALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRAL
CGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagctccggcagcccccgaccccgccgccagcgaaccgggcagcagcggtgcg
gacgcggccgccggctccagggagaccccgttgaacccggaatccgcccgcaagagcgag
ccgcccgccgcggtgcgcaggcagagctattcgagcaccagcagaggtatctcagtaaca
aagaagacgcatacatctcaaattgaaattattccatgcaagatctgtggagacaagtca
tcaggaatccattacggtgtcattacatgtgaaggctgcaagggctttttcaggagaagt
cagcaaagcaatgccacctactcctgtcctcgccagaagaactgtttgattgatcgaact
agtagaaaccgctgccagcactgccgactacagaaatgccttgccgtgggcatgtcgcgg
gatgctgtaaaatttggccgcatgtcgaaaaagcagagggacagcttgtacgcggaggtg
cagaagcaccggctgcagcagcagcaacgtgaccacccgcagcagcccggagaggccgag
ccgctgacgcccacctacaacatctccgccaacgggctcacggagctgcacgacgacctc
agcaactacatggacgggcacacccccgagggcagcaaggctgactcggcggtcagcagc
ttctacctggacatccagccctctcccgaccagtccggtctggacatcaacggcatcaaa
ccggaacccatctgtgactacacaccagcatccggcttcttcccctactgttccttcacc
aatggggagacgtccccgaccgtgtccatggcagaattagagcacctggcacagaatata
tccaagtctcatctggagacctgccagtacttgagagaagagctccagcagatcacgtgg
cagaccttcctgcaggaggagatcgagaactatcaaaacaagcagcgagaggtgatgtgg
cagttgtgtgccatcaagattacagaagctatccagtacgtggtggagtttgccaaacgc
attgatggatttatggagctgtgtcaaaacgatcaaattgtgcttctaaaagcaggctct
ctagaggtggtgttcatcaggatgtgccgtgcctttgactcgcaaaacaactccgtgtac
tttgatgggaagtatgctagccccgaagtcttcaaatccttagggtgcgaagactttatt
agctttgtatttgaatttggaaagagtttatgttctatgcacctgactgaagatgaaatc
gcattattttctgcatttgtacttatgtcggcagatcgctcatggctacaggaaaaggta
aaaattgaaaagctgcaacagaaaattcagctagcacttcagcacgtcctacagaagaac
caccgagaagatggaatattaaccaagctaatatgcaaggtgtctacattaagagcctta
tgtggacgacatacagaaaagctaatggcattcaaagcaatatacccagacattgtgcga
cttcattttcctccattatacaaggaattgttcacttcagaatttgagccagcaatgcag
attgatgggtaa
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