Ochotona curzoniae (black-lipped pika): 121148672
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Entry
121148672 CDS
T11174
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03013
Nucleocytoplasmic transport
ocz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121148672 (PNN)
03015 mRNA surveillance pathway
121148672 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121148672 (PNN)
03041 Spliceosome [BR:
ocz03041
]
121148672 (PNN)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121148672 (PNN)
Spliceosome [BR:
ocz03041
]
Complex C
Other components
EJC/TREX
121148672 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
DUF4825
Motif
Other DBs
NCBI-GeneID:
121148672
NCBI-ProteinID:
XP_040824838
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAISRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEVEEAGEEEEKEVGTVHSDVEKEQEEEEQKQ
EVEVKMEEENEVRESEKQQDSQPEEVMDVLEMVENVKSVTAEQEVMETNQVESTEPSENE
TSKELEPEMEFEVEPDKECKSLSPEKENVSTLEIEKESEEKEEKELESQPEPVDQSQAQC
QPQLQSQPQPPLQSQAPPQPQPQPQSVPQPQPETVPVAVLQPPPQVIQEQGHLPPERKEF
AVESVKLTDVPIEPVLTAHAESKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSSSSSS
GSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSVDR
KRRDTSGLERSHKSSKGGGSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDR
KDKRR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgccgtgagaactttgcaggagcagctagagaaggccaaagagagcctcaag
aacgtagatgagaatatccgcaagctcaccgggcgcgatcccaatgacgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggtcgtggtagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcaatcagtaggctgggcggggagcgtcggacaagaagagaatcacgccaagagagc
gacccagaggatgatgatgttaaaaagccagcattgcagtcttcagttgtagctacctcc
aaagagcgtacacggagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccggcgaatatttggcttgttgatgggcacgcttcagaaatttaagcaagaatcc
actgttgccactgaaaggcaaaagaggcgccaggaaattgaacagaaacttgaagttcag
gctgaagaagagagaaagcaggttgaaaatgagagacgagagctgtttgaagagaggcgt
gctaagcaaacagagctgaggcttttggaacagaaggttgagcttgcgcagctgcaagaa
gagtggaatgagcataatgccaagataattaaatatataagaactaagacaaagccccat
ttgttctatattcctggaagaatgtgtcctgccacccaaaaactaatagaagagtcacag
agaaagatgaatgctttgtttgaaggtagacgcatcgaatttgcagaacagataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaagtagaggaagcaggagaggaagaagaaaag
gaagtaggtacagttcatagtgatgtggagaaagaacaggaagaggaggaacagaaacag
gaagtggaggttaagatggaggaagaaaatgaggtcagggaaagtgagaagcagcaggat
agtcagcctgaagaagttatggacgtgctagagatggttgagaacgtaaaaagtgtaact
gctgagcaggaagtaatggaaaccaatcaagttgaaagtacagaaccttcagaaaatgaa
actagcaaagaattggaaccagaaatggaatttgaggttgagccagataaagaatgtaaa
tctctttctcctgagaaagagaatgttagtactctagaaatagaaaaagagtctgaggaa
aaagaagagaaagaacttgaatcccagcctgagcctgtggaccagagccaagcccagtgc
cagcctcagctccagtcccagcctcaacctccactccagtctcaggctccaccccagccg
cagccccagccccagtctgtaccccagccacagcctgagactgtgccggtagctgtttta
cagccaccacctcaggttattcaggagcaagggcatctacctcctgaaaggaaggagttt
gctgtggagtctgtaaaactcactgatgtgccaatagagccagtcttaacagcacatgcc
gagagcaaaaccaaaactaggagcagaagtagaggccgagctagaaataaaacaagcaag
agtaggagccgtagcagcagcagcagcagttctagtagcagttccagcagtagcagcagt
ggaagcagttccagcagtggcagtagtagtagtcggagcagttccagtagcagttccagt
acgagtggcagcagcagcagagacagtagtagcagcactagtagtagtagtgaaagtaga
agtcgaagtaggggccggggacataacagagatagaaaacacagaaggagtgtggatcgg
aagcgtagggacacatcaggtctagaaagaagtcacaagtcttcaaaaggtggtggtagt
agggatacaaaaggatcaaaggataagaattcccggtccgacagaaagaggtccatatca
gagagtagtcgatcaggaaaaagatcttcaagaagtgaaagagaccgaaaatcagacagg
aaagacaaaaggcgttaa
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