Ochotona curzoniae (black-lipped pika): 121149171
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Entry
121149171 CDS
T11174
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121149171 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121149171 (MYO5C)
04131 Membrane trafficking [BR:
ocz04131
]
121149171 (MYO5C)
03029 Mitochondrial biogenesis [BR:
ocz03029
]
121149171 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocz04812
]
121149171 (MYO5C)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
121149171 (MYO5C)
mRNA cycle factors
P-body specific factors
121149171 (MYO5C)
Membrane trafficking [BR:
ocz04131
]
Others
Actin-binding proteins
Myosins
121149171 (MYO5C)
Mitochondrial biogenesis [BR:
ocz03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121149171 (MYO5C)
Cytoskeleton proteins [BR:
ocz04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121149171 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
nSTAND3
DUF6026
NPHP3_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
121149171
NCBI-ProteinID:
XP_040825575
LinkDB
All DBs
Position
Unknown
AA seq
1742 aa
AA seq
DB search
MAVAELYTQYNRVWIPDPEEVWKSAEIAKDYRVGDRVLHLLLEDGTELDHPVDPKALPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSSDAHIEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDKRNQIIGANMRTY
LLEKSRVVFQAENERNYHIFYQLCACAQQSEFKHLRLGIAEEFNYTRMGGNTVIEGVNDR
ADMLETQRTFTLLGFKEDFQMDIFKILAAILHLGNVQIIAVSNERSSVSEEDIHLQVFCE
LLGLDSSHVAQWLCNRKIVTSSETVVKPMTRPQAVNARDALAKKIYAHLFDFIVERINQA
LQFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNSLFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVYDTLIEILRASKFHLCAKFFQEDPTPPSPF
GAMITVKSAKQVIKGNSKHFRTTVGNKFRSSLYLLMETLNATTPHYVRCIKPNDEKLPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYGILMTKQELGFSDKKEVCKVV
LNRLIQDSNQYQFGKTKIFFRAGQVAYLEKLRLDKLRQSCVMIQKHIRGWLQRRKFLRER
QAALTIQQYFRGQQTVRKAVTATALKEAWAAITIQKYCRGYLVRNLYQLIRVATITIQAY
TRGFLARRRYRKVLEEHKAVILQKYARAWLARRRFQNIRRFVLNIQLTYRVQRLQKKLED
QNKENHGLVEKLTSLAALRAVDVEKIQKLETELERAVSHRQNSEEKGKRYRDAVEEKLAK
LQKHNSELEVQKEQIQLKLQEKTEELKEKMDGLTKQLFDDVQKEERQRILLEKSFEQKTQ
GYEKQIQSLKEEIKALKDERMQLQNQVEEERLTSDGLKGEVARLHKQAKTISEFEKEIEL
LQTQKIDVEKHVQSQKREMREKMSEITRQLLESYDIEDVRSRLSVEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKDCYEKEIEALNFKVVHLSQEINHLQKLFREENDINESIRHE
VTRLTSENMMIPDFKQQISELEQQKQDLEIRLSEQTEKMKGRLEELSNQLNRSRDEEGTP
RRILETQSEIHSKEKEKLLGNIQEVQDTGEPLKKELENDSEGSSNIQQEAAHLTLEARDL
EEELDMKDRIIKKLQDQIKTLTKTIEKANDVSLSSGPKEYLGMLEYKREDEAKLIQNLIL
DLKPRGVVVNMIPGLPAHILFMCVRYADSLNDADMLKSLMNSTINGIKQVVKEHLEDFEM
LSFWLSNTCHFLNCLKQYSGEEEFMKHNSPHQSKNCLNNFDLSEYRQILSDVAIRIYHQF
MTVMENSIQPIIVPGMLEYESLQGISSLKPTGFRKRSSSIDDTDAYTMTSLLQQLSYFYS
TMCQNGLDPELVRQAVKQLFYLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDK
NLQNSLAKETLEALSQAAWLLQVKKATDSDAKEISERCTSLSAVQIIKILNSYTPIDDFE
KRVTPSFVRKVQALLNSREDSSQLMLDTKYLFQVTFPFAPSPHALEMIEIPSSFKLGFLN
RL
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgagctgtacacgcagtacaaccgggtctggattcccgatcctgaagaa
gtttggaaatctgcggaaatagccaaggactatagagttggtgaccgagtgctgcacctg
ctgctggaggatggaacggagctggatcaccctgtggatccaaaagcattgcctccactt
cgcaatcccgacatcctggtgggcgagaatgacctcacggccctcagctacctgcacgaa
cccgctgtgctccacaacctcaggatccgcttcgcagagtccaaactcatttacacctac
agtgggatcatcttggtggctatgaacccttacaagcagctgcccatctatggagatgcc
atcatccatgcctactctgggcagaacatgggcgacatggacccacacatatttgctgtg
gctgaagaggcatacaagcagatggccagaaacaacaaaaatcagtcgatcatcgtgagc
ggggagtcaggtgctgggaagactgtgtcggctcgctatgccatgcggtacttcgccaca
gtcagcaagtcgagcagcgacgcgcacatcgaggacaaggtcctggcgtccaatcccatc
accgaggctgtcgggaatgccaagactacccgcaatgacaacagcagtcgctttgggaaa
tacacggaaatcagtttcgacaagaggaatcagatcataggagccaatatgcggacttac
ctcctggaaaaatccagagttgtcttccaggcagaaaatgaacggaattaccacattttc
tatcagctgtgtgcatgtgcacagcagtcggaatttaaacatctcagactgggtattgcg
gaggagttcaattacacgagaatgggaggcaacactgtgatcgagggtgtgaatgacaga
gctgacatgctggagacacagaggaccttcacgctgctgggtttcaaggaggacttccag
atggacatctttaagatcctggcagccatcctacatctgggcaatgtgcagattattgca
gtgagcaacgagaggtcttcagtcagtgaggaagacatccacctgcaggtgttctgtgag
ctcctgggcctggacagcagccacgttgctcagtggttatgcaaccgcaagatcgtcaca
agctccgagacggtggtgaaacccatgaccaggccccaggctgtcaatgccagggatgcc
ctggccaaaaagatctatgcacacctgttcgacttcattgtggagagaattaaccaagcg
ttgcagttctcaggcaagcagcacacttttattggtgttttggacatttatggttttgaa
acctttgacgtcaacagctttgaacagttttgcattaattatgctaatgagaaactgcag
caacagttcaacctgcatgtctttaagcttgaacaagaagagtacatgaaggaagatatc
ccctggactctgatagatttctatgacaatcagccagttattgacttgattgaagccaaa
atgggcattctggagttactggatgaagaatgcttgttaccacatggaaccgatgaaaac
tggcttcagaagctgtataataattttgtcaacaagaactctctgtttgaaaagcccaga
atgtcaaacacatccttcatcatccaacacttcgccgataaggtagagtataaatgtgaa
ggcttccttgagaagaacagagacaccgtctatgacacgctgattgaaatcctgagagcc
agcaagtttcatctctgtgccaagttttttcaagaagatccgactcccccctcccctttt
ggtgcaatgatcacagttaagtctgcaaagcaagtcatcaagggcaacagcaagcatttc
cggaccacagttgggaacaagttccgcagctctctctacttgctgatggagaccctcaat
gccacgactccccactatgtccgctgcatcaagccaaatgacgagaagctgccctttgag
tttgattccaaaagaattgtgcagcagctgcgagcctgtggcgtcttagaaacaattcgc
atcagtgctcagagctacccttccaggtggacgtacatcgagttctatagccgctacggc
attctcatgaccaagcaggagcttggcttcagtgacaagaaagaggtgtgcaaggtggtt
ctaaacaggctcatccaggattctaatcagtaccagtttggtaagaccaaaattttcttc
agagcaggacaagtggcttatttagagaaactgcggctagataaactgaggcagagctgt
gtgatgatccagaagcacatccgtggctggctccagagaaggaagttcctgcgagaacgc
caggcagccctgacaatccagcagtacttccggggccagcaaactgtgaggaaagcagtt
actgccacagccttaaaagaagcatgggcagccatcaccattcagaagtactgccgaggg
tacctggttcgcaacctgtaccagctcattcgcgtggccaccatcaccatccaggcctac
acccgggggttcctggcgaggaggagataccgcaaggtgctggaggaacacaaggctgtg
atcctgcagaagtatgcccgggcatggctcgccaggcgcaggttccagaacatccgccgg
tttgtgctcaacattcagctcacgtacagggtccagcgtttgcagaaaaagctagaagat
cagaacaaagagaaccacggtctggtggagaagctgaccagcctggccgctcttcgggca
gttgatgtggaaaagatccagaagctggaaacagaactggagagagcggtcagccaccgg
cagaactctgaggagaaggggaagagatacagggatgctgtggaagagaaattggccaag
cttcagaagcataactcagaactggaggtgcagaaagagcagatacagctgaagcttcag
gagaagacggaagagttgaaggagaaaatggacggcctcaccaagcagctgtttgatgat
gtgcaaaaagaggaacgacagagaatacttcttgaaaaaagctttgagcagaaaacgcaa
ggctacgagaagcagattcagtctttgaaagaagaaatcaaagctctcaaggacgagaga
atgcaattgcagaatcaagtggaggaagaacgcctcaccagcgacggcttgaagggggag
gtggcgcgactgcacaagcaggccaagacaatctctgagtttgaaaaggagatagaacta
cttcagacacagaagatcgatgtggaaaaacacgtgcagtcacagaaacgggaaatgcga
gaaaagatgtcagaaatcaccagacagcttctggaaagctatgatattgaagacgttaga
agcaggctctccgtggaagacttggagcacttaaatgaggatggagaactttggtttgct
tatgaaggactaaagaaagccacacgtgttttggagagccatttccaatcccagaaagat
tgctatgaaaaggaaatagaagctttgaatttcaaagtggtgcatctaagtcaagagatc
aaccacctgcagaagttatttagagaagagaacgacatcaatgaaagcatccgtcacgaa
gtgaccaggctgacatcagagaacatgatgatcccagactttaagcagcagatttcggag
ctcgagcaacagaagcaagaccttgaaatccgcctgagtgagcaaactgagaagatgaaa
ggaagactggaagagttgtccaaccagttgaatcgcagtcgagacgaggaaggaacacca
agaaggatcttagaaacccaaagtgaaatacactccaaagagaaagagaagctgctgggt
aacattcaagaagtacaggataccggtgagcccttgaagaaagagttggaaaatgacagt
gaaggctccagcaacatccagcaggaagcagctcatcttactttggaagccagggatctg
gaagaagagttagacatgaaggacagaataattaaaaagctacaagatcaaatcaagact
ctaaccaagacaattgaaaaagccaatgatgtgagcttgtcctcggggcctaaggagtac
ctaggcatgctggaatacaagagagaagatgaggccaaactcattcaaaacctcattctt
gacttgaagcctcgtggtgtggtggtgaacatgatccccggactgccagctcacatcctg
ttcatgtgcgtgcgctacgcagactcgctcaacgatgccgatatgctcaagtcccttatg
aacagcaccattaatggcatcaagcaggtggttaaggaacatctggaagattttgagatg
ctgtccttttggctctccaatacttgccatttcctcaactgcctgaagcagtacagtgga
gaagaggaattcatgaagcataacagtccccatcagagtaagaattgcttgaacaatttt
gacctttcagagtacaggcagattctgagcgatgtggctatacgcatatatcatcagttc
atgactgtcatggagaatagcatacagccaatcatagtgcctggcatgctggagtacgag
agcctgcagggcatctccagcctgaagcccacgggcttccggaagcgctcgtccagcata
gacgacacggacgcctacaccatgacgtcactgctgcagcagctaagctacttctacagc
accatgtgccagaacgggctggaccccgagctcgtgaggcaagccgtgaagcagctcttc
tacctgatcggggccgtcaccctcaacagcctcttcctgcgcaaggacatgtgttcctgc
cgaaaagggatgcaaataaggtgcaacatcagctacttagaagaatggctcaaggataag
aatctgcagaacagcttagccaaggaaactctggaggccctgtctcaggcagcctggctg
ctccaggtcaagaaagccaccgacagtgacgccaaggagatctctgaacgctgcacctca
ttgtcagccgtacagatcatcaagatccttaactcctacacacccatagatgactttgag
aaaagagtgaccccctcctttgttcgcaaagtccaggcactcctcaacagccgggaggat
tcctcacagctgatgctggacaccaaatacctcttccaagtcacatttccttttgcccca
tctccgcacgctctggaaatgatcgagatccccagcagtttcaagctgggctttctcaat
cgattgtaa
DBGET
integrated database retrieval system
