Ochotona curzoniae (black-lipped pika): 121149305
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Entry
121149305 CDS
T11174
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocz03041
]
121149305 (PRPF39)
Spliceosome [BR:
ocz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121149305 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_16
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
121149305
NCBI-ProteinID:
XP_040825753
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MQNSHMDEYRNSSNGSTSNSSEVVVEHAPDFSTEIMNVTEMEQSPDGSPGVNASTEESEM
ANAVDLPVTVAETEPSFPAEYDKFWKTVESNPQDFTGWVYLLQYVEQESHLMAARKAFDK
FFVHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPG
DPETSSTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLY
SHHFQRFKDHIQNNLPRDLLTDEQFIQLRRELASVNGHSGDDGPPGDDLPLGTEDITDPA
KLITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYL
EFEIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTIHLPKK
PMVHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQD
AIKNAKSSNESSFYAIKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSG
DLKQNEENILSCFDKAVHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKE
QDSLKRKAENGSEEPEEKKAHTDDTTSSSTQMIDGDLQANQAAYNYSAWYQYNYQNPWNY
GQYYPPPPT
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattcccacatggatgagtacagaaactccagcaatggcagcacaagcaacagt
tcagaggtagtggtagaacacgctcctgatttcagcaccgagattatgaatgtaacagaa
atggaacagtcacctgatggctctcccggtgtgaatgcatctacagaagaaagtgaaatg
gcaaatgctgtggaccttcctgtgacagtggcagaaacggaaccaagtttccctgcagaa
tatgacaaattttggaaaactgtagagagtaatcctcaggattttacaggctgggtatat
ttgcttcagtatgtagaacaggagagtcacttgatggctgccaggaaagcatttgacaaa
tttttcgtgcactatccgtattgctatggttactggaaaaagtatgcagaccttgaaaag
cgacatgacaacataaaacaatcagatgaggtttatcggcggggtcttcaggcaatacct
cttagtgttgacctttggatacattatataaacttcttaaaagagacattggaccctggt
gatcctgagaccagcagcacaatcagaggaacttttgagcatgctgttctagctgcagga
acagacttccgatctgacagactatgggaaatgtatataaactgggaaaatgaacaagga
aacctgagagaagttacagccatctacgatcgtatccttggtattccgacacagctgtat
agtcatcattttcagagatttaaagatcatatacagaataatttgcctagagatctttta
actgatgaacaatttattcagctgagaagggaattagcatctgttaatggacatagtggt
gatgatggtccacctggtgatgatctgccattaggaactgaagacataactgatccagca
aagctaattactgaaatagaaaacatgagacatcgaatcattgagattcatcaagaaatg
tttaattataatgaacacgaagttagtaaaaggtggacttttgaagaaggtatcaaaaga
ccttattttcatgtgaaaccattggaaaaggcacaacttaaaaactggaaagaatattta
gaatttgaaattgaaaacgggactcatgaacgagttgtggttctctttgaaagatgtgtc
atatcatgtgccctctatgaggagttttggattaagtatgccaagtacatggaaaaccat
agcattgaaggagtgaggcatgtcttcagcagagcttgtactattcatcttccaaagaaa
cccatggtgcatatgctttgggcagcttttgaggagcaacagggcaatattaatgaagcc
aggaatatcttaagaacatttgaagaatgtgttctaggattggcaatggttcgtttgcga
agagtaagtttagaacgtcggcatggaaatatggaagaagctgagcatttgcttcaggat
gccattaaaaatgccaaatcaagtaatgagtcatctttttatgctatcaaactagcccgg
catcttttcaaaatacaaaaaaatcttccaaagtcaaggaaggtgcttttagaagccatt
gaaagagacaaagagaacacaaagttatacctcaatttacttgaaatggaatatagtggt
gacctcaaacaaaatgaagaaaatatcctcagttgttttgacaaagctgttcatggatca
ttacctattaaaatgagaattacattctctcaaagaaaagtggaatttcttgaagatttt
ggttcagatgttaataagcttctgaatgcttatgatgaacatcaaacactcctaaaagaa
caggattctttaaaaaggaaagcagaaaatggatcagaagaaccagaggaaaagaaagca
catacggacgatacaacctcatcatctacacagatgattgatggcgatttacaggcaaat
caagctgcatataattatagtgcctggtatcagtacaattatcagaatccttggaattat
ggacagtattatcctccccctccgacgtga
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integrated database retrieval system
