Ochotona curzoniae (black-lipped pika): 121149352
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Entry
121149352 CDS
T11174
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03013
Nucleocytoplasmic transport
ocz03015
mRNA surveillance pathway
ocz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121149352 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
121149352 (ACIN1)
03015 mRNA surveillance pathway
121149352 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121149352 (ACIN1)
03041 Spliceosome [BR:
ocz03041
]
121149352 (ACIN1)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121149352 (ACIN1)
Spliceosome [BR:
ocz03041
]
Complex C
Other components
EJC/TREX
121149352 (ACIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
121149352
NCBI-ProteinID:
XP_040825848
LinkDB
All DBs
Position
Unknown
AA seq
1275 aa
AA seq
DB search
MAELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPH
AAFQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASAESEDEMLHPEG
VASLLPPDFQSSLERPELELSRHSPSPTSRKGSSVSEEKGDSDDEKPRKGERRSSRVRQA
RAAKECSQAAEEEEDQEAPSRNLRVRTDRNLKTEEEEEEEEVEEDDEEEENAEGQKSREA
PVLKQFKEEEGEEMPIAKPEEVVDERSKPIMSHEQGAVERGGRVTRSQDEARRSHLARQQ
QEREQRTTSPLEEEREIKPLQGLEAKSKSPSPPRLTEDLEKAPPVLPPGLTVSEEETPPP
LLTKEAASPPPTQLQSEEEAEPMEGPAPPVLMQLSPLKKDAENRELLTSQRPVRLVGSLS
PSSSPADTKAESPAEQVPKESVLPPAQKSTPTPYSAQKVLETESEKSAQPLPLKIQELAL
PKGISEQSLEQKEGRRASHPLLGCRLQQSTDSSSSRSSSSSSSSSRSRSRSPDSSGSPSH
SPPRSKQRDGSQAHAHTNPRGSPKMGSRSTSESRSRSRSRSASSNSRKSLSPGVSRDSST
SFVETKDPPSGQENAAPPLPQPQVLEPKDRMSPSSSSTPVRHRSQPEPVEKHMTQRLQPE
RGSPKKCEAEEAEPPAATQPQTSETQPSRLPGSGRIRHTGEEKEEVTMDTSESRPENEVP
EPPMPMADQVSNDDRPEGNADDEEKKESSLPKSFKRKISVVSATKGVPAGNSDTEGGQPG
RKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAVVDLHADDSRISEDETERNG
DDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEPPVPPQVSVEVALPPPVEH
EVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNLVRPFTLG
QLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKFLCADY
AEQEELDYHRGLLVDRPSEAKAEEQGVPRPLHPPPPPPVQPPQHPRAEQREQERAVREQW
AEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEKAQEEP
PAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQKEREKE
AERERTRQLEREKRREHSRERERERERERERDRGERDRDRERDRERGRERDRRDTKRHSR
SRSRSTPVRDRGGRR
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctggaggaggtgactctggacgggaagcctcttcaggcgttgcgggtgacc
gacctgaaggccgcactggagcagcgaggcctagccaagagcgggcagaagagtgccctg
gttaaacggctcaaaggggctctaatgctagaaaatttacagaaacactcaacaccccat
gctgcattccaaccaaactcccagattggtgaagaaatgagccagaacagtttcataaag
cagtatctggaaaagcagcaggagctgctgaggcagcgtctggaacgcgaagctcgggaa
gccgccgagctcgaagaagcttcagctgagtcggaggacgagatgctccatcctgaggga
gtggcttcgctgctacctcctgattttcagagcagcctggagagaccagagctggaactc
agcagacattcgcccagccctacgtccagaaaaggctcctctgtttctgaagagaaaggt
gactctgatgacgagaagccgaggaaaggggaaaggcgctcctcccgcgtgagacaggca
agagctgcaaaagaatgcagccaggctgctgaggaggaagaagatcaggaagcgccttct
agaaatctgagggttagaacagatcgaaatttgaaaacagaggaggaagaagaggaggag
gaggtggaggaagatgatgaagaggaagaaaatgcagaaggacaaaaatctagggaagca
ccagtcttaaaacagttcaaggaagaagagggcgaagagatgcccattgccaagccagag
gaggtagtggatgagagatccaaacccatcatgtcccatgagcaaggggctgtagagaga
ggtggccgggttaccagatcccaggatgaggccagaagaagtcatctagcacgacagcag
caggaaagagagcagagaacgacttctccccttgaggaagaaagagaaataaaaccttta
cagggcttggaggcaaaatcgaaatcgccttcccctcctcgcctgactgaagatctggag
aaggcgcctcctgtgctaccaccagggctaacggtcagtgaggaggagacgccaccacct
ttactcaccaaggaagcagcttcgccacctcccactcaactccagagtgaagaagaggct
gagcccatggaaggcccggcaccccctgtcctcatgcagttgtcgcctcttaagaaggat
gctgagaacagggagctgttaacatctcagcgtcctgtccgattggtgggaagcctctct
ccttcatcaagtcctgcagacaccaaagcagaatctcctgcagagcaagtgcccaaggag
agtgtcctgcctccagctcagaaaagcacaccaactccatactcagcccagaaggttctt
gagactgagtcagaaaaatctgctcagccactccctctaaaaatccaggagttagcactg
cccaaagggatctctgagcaatctttggaacagaaggaaggcaggagggcttcgcatcct
cttctgggttgcagattgcaacagtcaactgattcatcctccagccggtcgtcatcatct
tcatcctccagttctaggtccagatctcgctctcctgacagttcaggctctccatctcac
tcacctccaagatccaagcagagagatgggtcccaggcacatgctcacaccaaccctcgt
ggtagccccaagatgggctccagatccacgtcagagtcccgctcccgttcccgctcccgg
tcagcatcaagcaacagcagaaaatccctgagccctggcgtctcgagggatagcagcacc
agcttcgtggaaaccaaagatccgccttctggccaggagaatgcagctccacccttgccg
caaccacaagtccttgagccaaaggacaggatgtccccctcctcatcgtccaccccagtg
aggcatcggagccagcctgagccagtggaaaagcacatgacccagaggttacagccggag
cgggggagcccaaagaagtgtgaagctgaagaggcagagccaccagctgccacacagccc
cagacctctgaaacccagccctctcgcctgccaggatcgggaaggattcgtcacactggt
gaggagaaggaggaagtgaccatggacacgagtgaaagcagacctgagaatgaggttcca
gagcctcctatgcctatggcagaccaagtcagtaatgatgaccgtccagagggcaatgct
gatgatgaggagaagaaagagagttcactgcccaaatcattcaagaggaagatctccgtt
gtctcagctaccaagggggtgccagctggaaacagtgacacagaggggggccagcctggt
cggaagcggcgttggggagccagcacagccaccacacagaagaaaccctccatcagtatc
accaccgagtcactcaagagcctcatccccgacatcaaacccctggcggggcaggaggct
gtcgtggatcttcatgccgatgactcccgcatctctgaggatgagacagagcggaatggc
gacgacgggacccacgacaaggggctgaaaatatgccggacagtcactcaggtcgtcccc
gcagagggccaggagaacgggcagcgggaagaagaggaagaggagaaggagccggaagca
gaaccccctgtgcctccccaggtgtcggtggaggtggccttgcccccacctgtggagcat
gaagtcaagaaagtgactttaggcgacaccttaactcggcgctccatcagccagcagaag
tctggagtgtccatcaccatcgatgaccctgtgcgaaccgcccaggtgccctccccgccc
cgtggcaagattagtaacattgtccatatctccaacctggtccgacccttcactttaggc
cagctaaaggagttattgggccgcacaggaaccttggtggaggaggccttttggattgac
aagatcaagtctcactgctttgtcacgtactcaacagtagaggaggcagttgccacccgc
actgctctgcatggagtcaagtggccacagtccaacccgaaattcctttgtgctgactat
gctgagcaagaagagctggattatcaccggggcctcttggtggaccgcccctctgaagca
aaggcagaggagcaaggggtaccacgacccctgcaccccccacccccacccccagtccag
ccaccacagcatccccgggcagagcagcgggagcaggaacgagccgtacgagagcagtgg
gcagagcgggaacgggaaatggagcggcgggagcgaacccgatcagagcgggaatgggat
cgggacaaagtgcgagagggaccccgttcccggtcacgctcccgtgaccgccgccgcaag
gaacgtgcaaaatcaaaagagaagaagagtgagaaaaaagaaaaggcccaggaggagcca
cctgccaagctgctggatgaccttttccggaagaccaaggcagctccttgcatttattgg
ctcccactgaccgacagccagattgttcagaaggaggcagagcgggctgaacgggccaag
gagcgagagaaacggcggaaggagcaagaggaagaagagcagaaggagcgggagaaggaa
gctgagcgggaacggacccggcagctggagcgggagaagaggcgggagcacagcagggag
agggagagagagcgagagagggagagggagcgagacaggggcgaacgagaccgagacagg
gagcgagaccgggaaaggggccgggagcgcgaccgcagagacaccaagcgccacagccgg
agccggagtcggagcacaccggtgcgggaccggggtgggcgccgctag
DBGET
integrated database retrieval system
