Ochotona curzoniae (black-lipped pika): 121149815
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Entry
121149815 CDS
T11174
Symbol
CDHR1
Name
(RefSeq) cadherin-related family member 1
KO
K16501
cadherin-related family member 1
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocz04515
]
121149815 (CDHR1)
Cell adhesion molecules [BR:
ocz04515
]
Cadherins
Cadherin related
121149815 (CDHR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_4
DUF7658
Motif
Other DBs
NCBI-GeneID:
121149815
NCBI-ProteinID:
XP_040826338
LinkDB
All DBs
Position
Unknown
AA seq
866 aa
AA seq
DB search
MRRNPWAALALGQLFLCLALANFAPHFFDNGVGSTNGNMALFSLPEDTPVGSHVYTLNGT
DPEGEPVSYHISFDPSARSVFSVDPTLGNITLVQELDREREDEIEAIISISDGLNLVAEK
VTILVTDANDEAPQFIQEPYVVLVPEDILPGSSIFTVRAVDKDTGSGGSVTYFLQNLYPG
KFAVDHHSGVLRLQAGATLDYEKCQAHFITVVAKDGGGRLRGADVVFSATATVTVTVEDV
QDMPPVFVGTPYYGYVYEDTLPGSEVLTVVAMDGDRGNPNRILYNLVNGSDGAFEINETS
GTIFVTQSPAQLQREMYELHVQVTEISSAGSAGDQAVAPITIRVVDLNNHPPTFYGESGP
QNRFELTMYEHPPQGEILRGLKITVNDSDQGANAKFNLRLVGPGGIFRVVPQTVLNEAQV
TIIVENSAAIDFEKYNVLAFKLLAVEVSTPEKFSSTADVVIQLQDTNDNDPTFTSHYYIA
RIPENAPGGTHVVAVTALDPDTGSWGEVKYSISGSEANLFLIHSATGLIYTQPWASLDAE
VTSRYNFYVKAEDMEGRSGLAEVCVIVLDVNDHYPQFGKSIEEKTMVLGIPVRIEATDQD
AEEPNNLVDYSITHAEPVNVFDIDAHTGEIRLKNSISSLEVLHNITPSGEDCTWSLQVQA
KDRGSPSFSTTALLKIDITDAKTLSRDPMAAFLIHTKDNPMKAVGVLAGIMATVVAITII
ISTATFWRNKKSNKVLPVRRVIRKRPSPAPRAVRIEWLKSRKAKAATKFMLKEDPPNENY
NNHNPVNPLPPTAPALPPPASSPPASSPPNTAAAHWTVPTISGSLSSPEPQELSEAKTSE
TPVQSTLVSELKQKFEKKSRDNKAYF
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgtaacccgtgggccgccctggccttggggcagctgttcctctgcctggccctg
gccaactttgctccccacttcttcgacaacggggtcggcagcaccaatgggaacatggca
ctgtttagcctcccagaggacacacctgtaggctctcacgtgtacaccctgaatggaact
gatcctgagggcgagccggtctcctatcacatcagctttgaccccagcgcaaggagtgtc
ttttctgtggaccccacacttgggaacatcacgctggtgcaggaactggacagagagagg
gaagatgagattgaagccatcatcagcatttctgacggcctgaatctggtggcagaaaaa
gtcacgatcctggtgacagatgctaatgatgaggcaccccagttcatccaggagccttat
gtcgtcttggttcccgaggacatacttcccgggagcagcatctttaccgtccgtgcagtg
gacaaggacacaggctctggagggagtgtcacctacttcctgcagaacctgtaccccggc
aagtttgctgtggaccatcacagcggtgtgctgcgcctgcaggctggggccaccctggac
tatgagaagtgccaggcccatttcatcaccgtggttgccaaggatggcgggggcaggctt
cgcggggccgacgtggtattctcagccactgccactgtcaccgtcaccgtggaggacgtc
caggacatgccccccgtcttcgtgggcacaccctactacggctacgtgtacgaggacacc
ctcccgggctcggaggtacttacagtggtggccatggatggtgaccgaggtaaccccaac
cgcatcctctacaacctcgtgaatgggagtgatggagcctttgaaatcaatgagacatcc
ggaaccatcttcgtcacacagagccctgcccagctgcagagggaaatgtatgagctgcat
gtgcaggtgactgagatcagttctgcagggagcgcaggggaccaagccgtggcccccatc
accatcagggtcgtggacctgaacaaccatcccccgacgttctatggagagagcgggccc
cagaacaggtttgagctgaccatgtacgagcacccgccgcagggggagatcctgcgaggc
ctcaagatcaccgtcaatgactccgatcagggagccaatgccaagttcaacttgcggctg
gtaggaccagggggtatcttccgggtggtgccacagaccgtcctgaacgaggcccaggtc
accatcatcgtggagaactctgccgccattgactttgagaagtacaacgtgctggccttc
aagctgctggccgtggaagtgagcacccctgagaagttcagctccacagcagacgttgtg
atccagctccaggacaccaatgacaatgaccccactttcacctcccactactacattgcc
aggatccctgagaacgccccggggggcacccacgtggtggctgtcacagctctggatcca
gacacaggatcctggggtgaagtcaaatattctatctctgggagcgaagccaacctgttc
ctgatccactcagccactgggctcatctacacccagccctgggccagcctggacgctgag
gtcacatccaggtacaacttctatgtgaaggcggaggacatggagggaaggtccggtctg
gccgaggtgtgtgtcatagtgttggatgtcaatgaccactacccccagtttggaaagagc
atcgaggagaagacgatggtgctggggatcccagtgaggattgaggctacggaccaggat
gccgaggagcccaacaacctggtggactactccatcacccatgctgagccagtcaatgtg
tttgacatcgatgctcacaccggggagatccggctcaagaactccatcagctccttggaa
gtcctgcacaatatcactcccagtggggaggactgcacgtggtccctccaggtgcaggcc
aaggaccgtggctcaccgtccttcagcaccacggccttactcaagattgatatcacagat
gctaagacgctgtcccgagaccccatggctgccttcctgattcacaccaaggacaacccc
atgaaggctgtgggtgtgctggctggcatcatggccactgtggtggccattaccatcatc
atctccactgccaccttctggcgcaacaagaaatccaacaaggtcttgcccgtgcgacgg
gtgatccgcaagcgccctagccctgcgccccgtgccgtccgcattgagtggctcaagtcc
aggaaggccaaggctgccaccaagttcatgctcaaggaggatcctcccaacgagaactac
aacaaccacaacccagtgaacccactgccccccacggctccagctctgcctccacctgcc
agctctccacccgccagctctccacccaacacagccgcagcccactggacagtgcccacc
atctcgggatccctctcttccccggagccccaagagttgtcagaagccaaaacctcagag
acccctgtccagtcaactctggtttctgagctcaagcagaagtttgagaagaaaagcaga
gacaacaaggcttacttctag
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