Ochotona curzoniae (black-lipped pika): 121150034
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Entry
121150034 CDS
T11174
Symbol
AP5B1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocz03400
]
121150034 (AP5B1)
DNA repair and recombination proteins [BR:
ocz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
121150034 (AP5B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
121150034
NCBI-ProteinID:
XP_040826613
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MGPPSRDAWAQRLAAFRASPSAFMAGPQGEDLGRDLLSDLRNDKLSEQTKVSLLSLSLEY
SAQLWPDAHSAEAAATSLLDTLVLLPPRPSALRRPLLLAATAALAAGGALGPASGASLRL
LPLLLGLASGRDRGGSLWPALEQGSLQATACECLRELESCRPGLLRDALGLLRDALGREG
PMQPLSLLLALALRHALALPPPAATRTSLQGLLTAPAAAAGSCPWNWMPAEDSDFALQCH
VPNWPPVAAEGAQGLELRPEESRELRATVAQLLDTSYLLSPVAQAQLLWLLGRALRGLRG
QLPALFKPQLARLLGAAPPVLLHAVLALKAAFGEALFTAQDEALLLCRLTLAAQHPALPL
PTHLFYLQCLLNFPENWPLGPEGEEAAPLLLGPRMCRGLLPSPLHEPMALLARLHLLCLL
CAEDQDEEEEGGQAQSLRCYLQELLAGLRRRAALEGGPRATATLCFQASYLATCCLAGQP
AVLTPLVHGLAQLYRARPVLAPHFVDLLDQVGRELGEPLKVALRQEVVSAPGRDAALGWH
LQMLAKVVDRDSQDATLRFLWAAGAHCPDWHLQQALLRVCRALLGTGGGGGLADLLQALA
RQLDDPDGRDHARLYYILLSHLAGPKLGAALGPSLATPAAAGAATSSLVAENQGFAATLM
VQEAAAPVRLSVGPRVAQGQLPVLRLQVEALQPVYSLELRFRVEGQLYGPLQEVHVPCLR
PSRPTSPLLLPLQPKRPAPAQLAVRAMYTTPSGLTCHARLPPLPVTFADLFLPFPQPPVG
SEQGFFQELWNACLPKGAESRVWCALGPQGLDAVVSRHLEPFVVVAQPPTSFCVAIRLPP
DSCLLLRLEAPRSDGVPVALRTDDWALLPLAGDYIRGLSAAG
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggggcccccgagtcgggacgcctgggcccagcgcctggcggccttccgggccagcccc
tctgcctttatggcaggtcctcagggcgaggatttgggacgcgacctgctgagcgacctg
aggaatgacaagctgagcgagcagaccaaggtgtccttgctgtccctcagcttggagtac
tcagcccagctgtggcccgacgcccattcggccgaggcggccgccacctccctgttggac
acgctggtgctccttccgcctcggccctcggccctgcggaggcccctgctcctggcggcc
accgcagccctggcggcaggaggtgcgctgggcccggcctcaggggcctcactgcggctg
ctgcccctgctgctcggcctggcctcaggccgcgaccggggcggaagcctctggcctgcc
ttggagcagggttccttgcaggccacggcgtgcgagtgcctgcgtgagctggagagctgc
cggccagggctgctgcgggacgcgctggggctgctgcgggacgcgctgggccgagagggc
cccatgcagccgctcagcctgctgctggcccttgctctgcgccatgccctggcgctgccg
ccgccagctgcaactaggaccagcctgcagggcctgctcaccgcgccggcggctgctgcg
ggtagctgtccctggaactggatgccagctgaggacagcgacttcgccctgcagtgccat
gtgcccaactggcctccagtggccgcggagggtgcgcagggcctggagctcaggcctgag
gagtcccgggagctgagggctactgtggcgcaactcctggacacttcctacctgctctct
cctgtggcccaggcccagctgctgtggctgctgggccgggccctgcgaggcctgcggggg
cagctgccagcgctcttcaagcctcagctggcacggctcctgggcgcagcgccacccgtt
ctgctgcatgcagtcctggcgctcaaggcggcctttggtgaggccctgttcacggcccag
gatgaggccctgctgctctgccgcctcaccctggccgcccagcacccagccctgcccttg
cccacccacctcttctatctacagtgcctcctgaactttcctgaaaattggccgctaggt
cccgagggtgaggaggcggccccactactgctgggaccccggatgtgccgtggcctgctc
cccagcccactgcatgagcccatggccctcctggcccgcctgcaccttctgtgcttgctg
tgtgcagaagaccaggacgaggaagaagaggggggccaggcacagagccttcgatgctac
ctgcaagagctgctggctggcctgcggaggagggcagccctggagggtggtcccagggcc
acagccacactttgcttccaggcgtcatacctggctacctgctgcctggctgggcagccc
gcagtactgacacccttggtccatggtctggcccagctgtatcgagcccggcctgtgctt
gcaccccactttgtggacctcctggaccaggtgggccgggagctgggggagcccctgaag
gtggcgctgcggcaggaagtggtgtcggcaccgggcagagatgcagcgctcggctggcac
ctgcagatgttggcaaaagtggtggatagggactcccaggatgctaccctgcgcttcctc
tgggctgcaggtgcccactgcccggactggcacctgcagcaggccctgctgagggtctgc
cgggctctgctaggcacgggcgggggtggtggcctggccgatttgctgcaggcactagcc
aggcagctggatgaccctgatgggcgcgaccacgcccgcctctactacatcctcctctcc
cacctggcgggacccaagctgggggcagccctgggcccttctcttgccacaccagcagcg
gcgggggcggccacctcttccctggtggctgagaatcagggcttcgctgccaccttgatg
gttcaggaggccgcagcccccgtgcgactgagcgtggggccgcgggtggcacaggggcag
ctcccagtgctgcggctgcaggtggaggcgctgcaaccggtgtactccttggagctgcgc
ttccgtgtggaggggcagctctacggacccctgcaggaggtccacgtgccctgcctgcgc
cccagccgccccaccagcccgctgctcctgcccctgcagcccaagcggccggcccccgcg
cagctggccgtccgcgccatgtacaccacacccagcggcctcacgtgccatgcccgcctg
ccgcccctgcccgtgacctttgccgacctcttcctgcctttcccccagcccccagtgggg
tctgagcagggcttcttccaggagctctggaatgcctgcctgcccaagggtgccgagagc
cgcgtgtggtgtgccctggggccgcagggactggacgctgtggtgtcccggcacctggag
cccttcgtggtggtggcccagccccccaccagcttctgcgtggccatccgtctgccccca
gactcgtgcctgttgctgcggctggaggcgccgcggtcagacggagtacctgtggccttg
cgcaccgacgactgggccttgctgcccctggctggggattacatacgtggcctgtcagct
gcgggctga
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