Ochotona curzoniae (black-lipped pika): 121150166
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Entry
121150166 CDS
T11174
Symbol
ATG2A
Name
(RefSeq) autophagy-related protein 2 homolog A isoform X1
KO
K17906
autophagy-related protein 2
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04136
Autophagy - other
ocz04140
Autophagy - animal
ocz05010
Alzheimer disease
ocz05014
Amyotrophic lateral sclerosis
ocz05016
Huntington disease
ocz05017
Spinocerebellar ataxia
ocz05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121150166 (ATG2A)
04136 Autophagy - other
121150166 (ATG2A)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
121150166 (ATG2A)
05014 Amyotrophic lateral sclerosis
121150166 (ATG2A)
05016 Huntington disease
121150166 (ATG2A)
05017 Spinocerebellar ataxia
121150166 (ATG2A)
05022 Pathways of neurodegeneration - multiple diseases
121150166 (ATG2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocz04131
]
121150166 (ATG2A)
03029 Mitochondrial biogenesis [BR:
ocz03029
]
121150166 (ATG2A)
Membrane trafficking [BR:
ocz04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
121150166 (ATG2A)
Mitochondrial biogenesis [BR:
ocz03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121150166 (ATG2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
121150166
NCBI-ProteinID:
XP_040826773
LinkDB
All DBs
Position
Unknown
AA seq
1953 aa
AA seq
DB search
MSRWLWPWSNCVKERVCRYLLHHYLGHFFQEHLSLDQLSLDLYRGSVALRDIHLETWSVN
EVLESMESPLELVEGFVGSIEVAVPWAALLTDHCTVRVAGLQLTLQPRQSPGPVAADSQS
WASCMTSSLQLAQECLRDGLPEPSEAPQPLEGLEMFAQTIETVLRRIKVTFLDTVVRVEH
SPGDRPRGVAVEVHVQRLEYCDEAVRDPSQAPPVDVHQPPAFLHKLLQLAGVRLHLEELQ
SQEDPPEPPVQIGSCSGYMELVVKLKQNEAFPGPKLEVAGQLGCLHLLLTPQQLQQLQEL
LSAMSLTDADGLADKLNKSRPLGAEDLWLIEQDLNQQLQAGTVAEPLSPDPLSNPLLNLE
STDLFFSMAGLTSSVASAVSELSLSDVDLSSSVHSHVASRRASVQASRAGKTAATAATTP
LPDTMRPDSLLKMTLGGLTLTLLQTAAPSSGPPDLATHFFTEFDAAKDGPVGSRDFHYLR
PRFQRACPCSHVRLTGAAVQLTWELRTGSRGRRTNSTDMHFGQLEVLECLWPRGASEPEY
TEILGFPSKLGSQASARPSAHLRHTQTLRRVPKSRPRRSVTCHCHSELALDLDDFQSDLE
LGALDRLTALLRLATTPPEPPAAASSLLTEPPQMEQQTVFRLSAPRATLRLHFPIADLRP
ERDPWSGRAVRPEQLRLELAEPQFRSELSSGPGPPEPTRLELTCSDLHGIYEDGEKPPVP
CLRVSKVLDPKSTGRKYFLPQVVVTLNPQASSTQWEAATDKGEDLELSTESPCELREPEP
SPFSSKRTMYETEEMVIPGDAEEMRTFQSRTLAMSRCTLEVTLPSAHVFLPSKEAYESIY
NRINNDLLMWEPAALFPTPCPAAQPRGCPSPSSSSWQDTFKMCKSAFKLGPTSTHPGLTP
DSDSDDEEAPFFSVGASSGAPQQPPAAEPSGPARSQSALSTLVTVLKGRVTALCEAKDES
GGRLEAAHGELVLDVEQGTIFNVSQYHGQSGLGYFCLEAEKATLYHRAVVDDYVLPGHLE
LPTSPPPAQLAPTIYPSEEGVIEQGASGRQGQGPHMLSTAVRIQLDPQRNVKEFLVTLRL
HRATLRHYMALPEQSWHSQLLEFLDVLDDPVLGYLPPTVITILHTHLFSCAVDYRPLYLP
VRVLVTAESFTLSSNIIMDTSTFLLRFILDDSALYLSDKCDVESPDLRRDYVCVLDVDLL
ELVIKTWKGSTEGKLSQPLFELRCSNNVLHVHSCADSCALLVSLLQYVLSAGDLHPPPRP
PSPTEIAGQKLSESPASLPLCPPVETALINQRDLADALLDTERSLRELAQPAGSALFQAS
PVSVYLFPGERNGTQPPSPPAGTCPGSFGSQPEVKEDETEEEGQADTVDSDEFCILDAPG
LGIAPRDGEPVVTQLHPGPIVVQDGHFSRPLGSTDLLRAPAHFPVPSSRVVLRELSLVWH
LYGGQDFGPHPGHRARAGLAGHRSSPSRCSGHNRPQNTWRTQGGSGRQHHVLMEIQLSKV
SFQHEVYPEEPATAPSGPAMPGQELEERPLSRQVFIVQELEVRDRLASSKINKFLYLHTS
ERMPRRAHSNMLTIKALHVAPTSSVGGPECCLRVSLMPLRLNVDQDALFFLKDFFTSLAA
GITPMVPGESSADARPDTRGQPSSPQEGQPAGVGVEVDGTQEAAGSGHGSPSPEQQPIYF
REFRFISEVPIWLDYHGKHVTVDQVGTFAGLLIGLAQLNCSELKLKRLCCRHGLLGVDKV
LGYALNEWLQDIRKNQLPGLLGGVGPMHSVVQLFQGFRDLLWLPIEQYRKDGRLMRGLQR
GAASFGSSTASAALELSNRLVQAIQATAETVYDILSPAAPISRSLQDKRSARRLRKDQQP
ADLREGVAKAYDTVREGILDTAQTICDVASRGHEQKGLTGAVGGVIRQLPPTVVKPLIVA
TEATSSLLGGMRNQILPDAHKHHALKWRSETQD
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgatggctgtggccatggtccaactgtgtgaaagagcgggtctgccgctacttg
ctgcaccactatctggggcacttcttccaagaacacctcagtctcgaccagctcagcctc
gatctgtaccggggcagcgttgccctgcgggacatccacctggagacctggtcggtgaat
gaggtgctggagtccatggagtcgccgctggagctggtggaaggcttcgtgggctccatc
gaagtagccgtgccctgggctgccctgctcaccgaccactgcacggtgcgcgtggctggc
ctccagctcaccctgcagccccgccagagcccagggccagtggctgctgactcccagagc
tgggcctcctgcatgacctccagcctgcagctggctcaggagtgtctgcgggatgggctg
ccagagccctccgaggccccgcagcccctcgaggggctggagatgtttgcccagaccatt
gagactgtgctgcggaggatcaaagtgacctttttggatacagtggtgagagtggagcac
tcgccgggggacaggccacgaggggtggctgtggaggtccacgtgcaaagactagagtac
tgcgatgaggctgtgcgggacccaagccaggcgccaccagtggacgtgcaccagccgccc
gccttcctgcacaagctgctacagctggctggcgtccgcctgcacttggaggagctgcag
tcccaggaggacccgccagagccccccgtgcagatcggcagctgctcagggtacatggaa
ctggtggtgaagctaaaacagaatgaggccttcccaggccccaagttggaggtggcagga
cagctgggctgcctgcacctgctcctgacaccgcagcagctccagcagcttcaggaactg
ctcagcgccatgagcctgacagacgccgatggcctggccgacaagctgaacaagagccgg
ccgctgggtgcggaagacctgtggctcattgagcaggatctgaaccagcagctgcaggca
ggcactgtggccgagcccctcagcccagaccccctcagcaaccccctcctcaacctagaa
agcactgacctcttcttctccatggccggcctcacgagcagcgtggcctcggccgtgtct
gagctctctctctccgacgtggacctgagctcctctgtgcacagccatgtggcttcccgc
cgggcgtctgtccaggcctcccgggccggcaagacagctgccactgctgccaccacgcct
ctccctgacaccatgcgccccgactcactgctgaagatgactttggggggcctgaccctg
accctgctgcagaccgctgccccgtcttccggaccacctgacctcgctacccactttttt
actgagttcgatgctgccaaggatgggcccgttggctcccgtgacttccactacttgcgg
ccacgcttccaaagggcttgtccctgcagccacgtccggctgacaggtgctgccgtgcag
ctgacctgggagctgcggacaggcagccgaggccgccggacaaacagcacggacatgcac
tttgggcagctggaggtgttggaatgcctgtggcccaggggcgcttcagagcccgagtac
acagagatcctgggctttcccagcaaactgggctcccaggcctcagcgcggccttctgct
cacctacgccacacacagaccctgcgccgtgtgcccaagagccggccccggcgctctgta
acctgccattgccactcagagctggccttggacctggacgatttccagtcggacctggaa
cttggggccctggaccggctcactgccctgctgcgactggccaccacaccccctgagcca
ccagctgccgcctccagcctgctgacggagcccccgcagatggaacagcagacagtgttc
cggctgtcagcacctcgggccacgctgcgcctccacttccccattgctgacctgcggccc
gagagggacccctggtcgggccgggccgtgcggcctgagcagctgcgcttggagctggct
gagccccagttccgctcagagcttagcagtgggcccggccctccagagcccacacgcctg
gagctcacctgttccgacttgcacggtatatacgaagatggagagaaaccacctgtcccc
tgtctgcgagtctccaaagtcctggaccccaagagcaccgggcgcaagtacttcctgccc
caggtagtggtgaccttgaacccccaggccagcagcacacagtgggaggcagccacggac
aagggggaggacctggagctgtccactgagagcccctgcgagctccgtgaaccagagcct
tctcccttctcctccaagaggaccatgtacgagacagaggagatggtgatcccgggggac
gctgaggagatgagaacgttccagagtcgcaccctcgcaatgtcccgctgcaccctggaa
gtgaccctgcccagcgcccacgtcttcctgcccagcaaggaggcctatgagagcatctac
aacaggatcaacaatgacctgctcatgtgggagcctgcggccttgttccccaccccctgc
cccgctgcccagccccgtggctgccccagcccctcttccagctcctggcaagacaccttc
aagatgtgcaagtcggccttcaagctgggccccacctccacccaccctggtctcacccca
gactcagactcggacgatgaggaagcccccttcttctctgtgggggcctcctcgggagcc
ccccagcagccgccagctgctgagccctcaggccctgctcgctcccagagtgccctgtct
accctcgtgacggtgctgaaggggcgtgtaacagccctgtgtgaggccaaggatgagagc
ggcgggcggctggaggcggcacatggggagctggtgctggacgtggagcaaggcaccatt
ttcaacgtgtcgcagtaccacggccagtccgggcttggctacttctgtctggaagccgaa
aaggccacgctgtaccaccgagcggtcgttgatgactatgtgctgcctggtcacctggag
ctgcccacctcccctcccccggcccagctggcccccaccatctacccctcggaagaaggg
gtgattgagcagggtgcctcaggccgtcagggccagggcccccacatgctgtccacggct
gtgcgcatccagctagatccccaacgcaatgtcaaggagtttctggtgactctgcgactt
cacagagccaccctgcgccactacatggctctgcctgaacagagctggcactcacagctg
ctggagttcctggatgtgctggacgaccctgtgctcggctatctgcccccgacggtcatc
accatcctgcacacgcacctgttctcctgcgccgtggactacaggcctctgtacctcccc
gtgcgagtcctcgtcaccgctgaatcgttcaccctgtccagcaacatcatcatggacacc
tccacctttctgctcaggtttatccttgacgactcggccttgtacctgtcagacaagtgt
gatgtggagagcccggatctgcggcgagattacgtctgcgtcctggacgtggacctgctg
gaacttgtgatcaaaacctggaagggtagcaccgaggggaaattgagccagccgctattc
gagctgcgctgctccaacaacgtgctgcatgtgcacagctgcgccgactcgtgcgccctg
ctggtcagtctgctgcagtatgtactgagcgcgggcgacctgcaccccccaccccggccc
cccagccccacggagatcgccggtcagaagctctccgagagcccagcctccctgcccctg
tgccccccagtggagacggccctcatcaaccagcgggacttggccgacgccctcctggac
acggagcgcagcctgcgggaactggcccagcctgcaggtagtgccctgttccaggcctcg
cccgtctccgtctacttgttcccaggggagcggaatgggacccagcccccttcaccacct
gccgggacctgtcctggcagctttgggtcccagcctgaggtaaaggaagatgaaacagaa
gaggaggggcaagcggacacagtggacagcgatgagttctgcatcctggatgctccaggc
ctgggcattgcgcctcgagatggggagcccgtggtgacacagctgcatccgggccccatt
gtcgtccaggatgggcacttctcacggccgctgggcagcacggacctgctgcgagcaccc
gcccacttccccgtgcccagcagccgtgtggtgctgcgcgagctctccctggtctggcac
ctctatggaggccaggacttcggcccccatcccggccacagggcaagagctggcttggcg
ggccacaggagctccccatcccgctgttctggccacaaccggccccagaacacgtggcgc
acgcagggcggcagtgggcggcagcatcacgtgctcatggagatacagctcagcaaggtc
agcttccagcatgaggtgtaccctgaggagccggctacagccccctcggggcctgcgatg
cctggccaggagctggaggagcggccgttgtcacgccaagtcttcatcgtccaggagctt
gaggtgcgcgaccggctggcctcctccaagatcaacaaattcctgtaccttcacaccagc
gagcgcatgccacggcgcgcgcactccaacatgctgaccatcaaagcactgcacgtcgcc
cccaccagcagtgtgggtgggcccgaatgctgcctgcgtgtctcactgatgcccttgcga
ctcaacgtggaccaggatgccctcttcttcctcaaagacttctttaccagcctagcagct
ggcatcacccccatggtgcctggggagagctctgctgatgctcgccctgatacccgaggc
cagcccagcagcccccaggaaggacaacccgcgggcgtgggcgtggaggtggatggcacg
caggaggccgcgggcagtggccacggctcaccttcacctgagcaacagcccatctacttt
cgggagttccgctttatatccgaggtgcccatctggctggattaccacggcaagcacgtg
accgtggaccaagtgggcacctttgctggcctcctcattggcctggcccagctcaactgc
tccgagttgaagctaaaacggctctgctgccggcacgggcttctgggtgtggacaaggtg
ctgggttatgccctcaatgagtggctgcaggacattcgcaagaaccagctgcccggcctg
ctggggggcgtgggccccatgcactcggttgttcagctcttccaaggcttccgggacctg
ctgtggctgcccatcgagcagtaccggaaggatgggcgtctcatgcgggggctgcagcga
ggggctgcctccttcggctcgtccacggcctctgccgccctggagcttagcaaccggctg
gtgcaggccatccaggccacagcggagaccgtgtatgacatcctgtcgccggcggcaccc
atctcccgctccctgcaggacaagcggtcagcccgcaggctgcgtaaggaccagcagccg
gctgacctccgggagggcgtggccaaggcctacgacacggttcgagagggcatcctggac
acagcacagacgatctgtgacgtggcatcacggggccacgagcagaaggggctgacaggc
gctgtggggggtgtgatccgccagctgcctccaacggttgtgaagccactcatcgtggct
acggaagccacatccagcctgctggggggcatgcgcaaccagattctaccagatgcccac
aaacaccacgccctcaagtggcgctcagagacccaagactga
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integrated database retrieval system
