Ochotona curzoniae (black-lipped pika): 121150206
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Entry
121150206 CDS
T11174
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04120
Ubiquitin mediated proteolysis
ocz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121150206 (SYVN1)
04120 Ubiquitin mediated proteolysis
121150206 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocz04121
]
121150206 (SYVN1)
Enzymes [BR:
ocz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121150206 (SYVN1)
Ubiquitin system [BR:
ocz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121150206 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-Nse
zf-C3H2C3
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
121150206
NCBI-ProteinID:
XP_040826848
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MFRTAVMMVASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLAILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPAPPEPADQGQPPAPHPA
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSAEAASAPSTSAAALPRPNGA
ASTTASSPGDTPATSTPAPGAGPAPGFPFPPWMGMPLLPPFAFPPMPVPPAGFAGLTPEE
LRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPAPAPVSPTEEPA
PPTAASTPSTSVSFPSTTEASIPSPGVSPAAPETAKAPAPESLGTEELPEDGEPDAAELR
RRRLQKLESPAAH
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgcagtgatgatggtggccagcttggcgctgaccggggccgtggtggcc
cacgcctactacctcaaacaccagttctacccgaccgtggtgtacctgaccaagtccagc
cccagcatggccgtcctgtacatccaggccttcgtcctcgtcttcctcttgggcaaggtg
atgggcaaggtcttcttcgggcagctgagggccgcagagatggagcaccttctggaacgt
tcctggtacgctgtcaccgagacgtgtctggctttcaccgtttttcgggatgacttcagc
ccccgctttgtggcactcttcactctcctcctcttcctcaaatgtttccactggctggct
gaggaccgagtggactttatggagcgcagccccaatatctcctggttatttcactgtcgc
atcgtctcccttatgttccttctggccatcctggacttcctcttcgtcagccatgcctat
cacagcatcctaacccgtggggcctccgtgcagctggtgtttggctttgagtatgccatc
ctcatgaccatggtgctcaccatcttcatcaagtatgtgctgcactcagtggacctgcag
agcgagaacccctgggacaacaaggccgtgtacatgctctacacggagctgttcactggc
ttcatcaaggtcctgctgtacatggccttcatgaccatcatgatcaaggtgcacaccttc
ccgctgtttgccattcggcccatgtacttggccatgaggcagttcaagaaagcggtaaca
gacgccatcatgtcacgccgggccatccgcaacatgaacacactgtacccagatgccacc
ccagaggagctgcaggcgatggacaacgtctgtatcatctgccgagaagagatggtgacc
ggagccaagagactgccctgcaaccacatcttccacaccagctgcctgcgctcctggttc
cagcggcagcagacctgtcccacctgccggatggatgtcctccgggcatcactgccagcc
cagtccccagcaccccccgagcctgcagatcaggggcagcctcctgccccccatcctgcg
cccctcttgccccaaccccctaacttcccccagggcctgctgcccccttttcctccaggc
atgttcccactctggccccccatgggcccctttccaccagttccaccaccccccagctca
gcagaggccgcatctgctccgtcaactagcgcagcagccctacctcggcccaatggggca
gcctccaccaccgccagcagccctggtgacactccagccacctccaccccagcccctggt
gctggcccggcccctggcttccccttcccaccttggatgggcatgcctcttctgcccccc
ttcgcctttcccccaatgcctgttccccctgcgggctttgccgggctgacccccgaggag
cttcgggctctggaaggccatgagcggcagcatctggaggcccggctgcagagcctgcgc
aacatccacacgctgctggacgctgccatgctgcagatcaaccagtacctcactgtgctg
gcctccctggggcccccccggccggccccagcaccagtgagccccactgaggaaccggcc
cctcccacggctgcctccaccccctccacctccgtcagcttccccagcaccaccgaggcc
tccatcccatcccctggagtgtctccagcagcccctgagactgcaaaagctccagctccc
gagtccctgggcaccgaggagctccctgaggacggagagcccgacgcggccgagctccgc
cgccgccgcctgcagaagctggagtcccccgcggcccactga
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