Ochotona curzoniae (black-lipped pika): 121151019
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Entry
121151019 CDS
T11174
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121151019 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121151019 (DCP1B)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121151019 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
121151019 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
121151019
NCBI-ProteinID:
XP_040828114
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MAAVAAGGLLEKGRDISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLF
VYTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEEC
QRIAELMKNLTQHEQLKACQGTGAGASPVLLSAGDGKEVDILRMLTKAKDEYTKCKTCSE
PKQITSSSAIYDNPNLIKPIPVKPSEHQQRIPQPSQTLDPEPQHLSLTALFGKQDRAPSS
ETVEQTQHKKLPGRPGVARSLSYEGPKRHSPTVEKQLCPAIQKLMVRGADLHPWAELPES
RPCQEGNPHLAVPPGSLRDPGAPPTPQSASRTQSLLEKLHSAPGAADKCDPGPTAPAPTP
TAAGSVTPSCSRTVTAAAESMAQPQLDHVNGTLAPPTPGPPARGKERAMLPGPAQPPCSI
PAGSPRVVAPQELLRKLRAIQQEQQLPVSTRPALAAKFPAAAQGPQTGKPLESWINKTSA
SGEKQAPFFQVASPPHSPAAVPPALLLAPTVFTHCTSTPPKERDNRLLALGGPDPPATSS
GLLVPLQNPEPLVSSSSPLTKLQLQEALLYLIQNDDNFLNIIYEAYLFSMTQAAMKKAA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtggcggcgggcggcctgctggagaaggggcgcgacatcagcctggcggcc
ctgcagcgccatgacccctatatcaaccgcatcgtggacgtggccagccaggtggccctg
tacaccttcggccatcgggccaacgagtgggagaagactgatgtggaaggaaccttgttt
gtttatacaaggtctgcttctccaaagcatggattcaccattatgaatagactgagcatg
gaaaataggacagagcccattactaaagaccttgatttccaactccaggaccctttcctt
ctctacagaaatgccagattgtccatttatggaatttggttttatgataaggaagaatgc
caaagaatcgcagagctcatgaagaacctaactcagcatgaacagttgaaagcctgccag
gggactggagcaggagcctccccagtgctcctcagcgcaggagatggcaaggaagttgat
atcctgcgcatgctcaccaaggccaaggatgaatacaccaagtgtaaaacctgttctgaa
ccgaaacagataaccagttcatctgccatctatgacaaccccaacctcatcaaaccaatc
ccagtgaagcccagtgaacaccaacagcgcatccctcagcccagtcagaccttagatcct
gaaccccaacacctatccttgactgctctgtttgggaagcaggacagagccccgagttca
gaaaccgtggagcagacccagcacaagaagcttccagggaggccaggggtcgcacgctcc
ctgtcctacgaggggcccaaaaggcactcgcccaccgtggagaagcagctgtgtccagcc
attcagaaactcatggtcaggggcgcggacctccacccgtgggcggagctgcccgagagc
cggccctgtcaagagggcaacccccacctggctgtcccaccaggctctctgcgggaccct
ggggctcctcctactccacagagtgcttccagaactcagagcctgctggagaagttgcac
agtgccccgggggccgctgacaagtgtgaccctggtcccacagcccccgctcccaccccc
accgcagcgggctctgtgaccccgagttgcagccggactgtcaccgcggcagccgagagc
atggctcagccgcagctggaccatgtcaatggcactctcgcgcctcccacaccaggccct
ccagctcgtgggaaagaacgggccatgctccctggaccagcgcagcccccatgtagcatc
cctgccggaagcccccgggtggtggcaccgcaggagttactgaggaagctgcgggccata
cagcaggagcagcagctgcctgtgtccacgcggccagccctggcagccaagtttcctgcg
gcagctcagggccctcagacagggaagcccctggagtcctggatcaacaagacgtcagcc
agcggagaaaagcaggctcctttttttcaggtcgcctcgcctccgcacagtcctgccgcc
gtgccgcctgccctgctcctggcccccacggtgttcacacactgcacctccaccccgccc
aaggagagggacaataggctcttggccctgggaggccccgacccgcctgccacgtccagc
ggcctcctggttcccctgcagaatccagagcccctggtgagctccagcagcccgctcacc
aagctacaacttcaggaggctctgctgtacctcattcagaacgatgacaacttcttaaat
ataatctacgaagcctatctcttcagcatgacacaggcggccatgaaaaaagctgcgtga
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