Ochotona curzoniae (black-lipped pika): 121151108
Help
Entry
121151108 CDS
T11174
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04136
Autophagy - other
ocz04140
Autophagy - animal
ocz04145
Phagocytosis
ocz04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
121151108 (ATG16L1)
04140 Autophagy - animal
121151108 (ATG16L1)
04136 Autophagy - other
121151108 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121151108 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocz04131
]
121151108 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
ocz03029
]
121151108 (ATG16L1)
Membrane trafficking [BR:
ocz04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
121151108 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
121151108 (ATG16L1)
Mitochondrial biogenesis [BR:
ocz03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121151108 (ATG16L1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
ATG16
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
DSE1_N
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_VPS8
CFAP251_N
Beta-prop_NOL10_N
eIF2A
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_ACSF4
Beta-prop_HPS5
Beta-prop_WDR41
Tricorn_2nd
Beta-prop_Vps41
KASH_CCD
ASA1
CCDC186_middle
Motif
Other DBs
NCBI-GeneID:
121151108
NCBI-ProteinID:
XP_040828251
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MSSGLRAGDFPRWKRHIAEELRRRDRLQRQTFEEIIVHYNKLLEKSDLHSVLAQKLQAEK
HDIPNRHEISPGHDGAWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQK
DREIQMNEARITECLQTISDLETECLDLRTKLQDLEIANQTLKDEYDALQITFTALEEKL
RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVLADEASEHTEETSPVRAVSRGATKRLSQPAGGLLDSITNIFGLSESPLLGHRSPDAAR
RRSVSSLPVAQDHVDTHPGSGKEVRVPTAALSVFDAHDGEVNAVQFSPGSRLLATGGMDR
KVKLWEVSGDKCEFKGSLSGSNAGLTSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL
TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMS
GHFDKKIRFWDIRSETIVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRANAVKQ
TFSAPGFKCGSDWTRVVFSPDGSYVAAGSADGSLYVWSVLTGKVEQVLMKQHSSSINAVA
WSPSGLHVVSVDKGSKAVLWAQP
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggggctccgtgccggtgacttcccgcgatggaaacgccacattgcggaggag
ctgaggcgccgggaccggctgcagaggcagacgttcgaggagatcatcgtgcactacaac
aagttgctggagaagtcagatcttcactcagtgttggcccagaagcttcaggctgagaag
catgacatccccaacaggcatgagataagtcctggacatgacggcgcgtggaatgacagc
cagctacaggaaatggcgcagctgaggattaaacaccaagaagagctgactgagttacac
aagaaacgtggagagttagctcagctggtgattgacctgaataaccaaatgcagcagaag
gacagggagatacagatgaacgaagccagaattacagagtgcttgcagactatctctgac
ctggagacggagtgcctagacctgcggactaaactacaagacctcgaaatagccaaccag
accctgaaggatgaatatgatgccctgcagatcacgttcacggccctggaagagaagctg
aggaagaccacggaggagaaccaggagctggtgaccaggtggatggctgagaaagcccag
gaggccaatcggctgaacgcggagaacgagaaggactccaggcggcggcaagcccggctg
cagaaggagcttgcagaagcagccaaggagcctttacccgtggaacaggatgatgacatt
gaagtccttgcggatgaagcctcggagcacaccgaggagacctctcccgtgcgagccgtc
agccgcggagccactaagcgactctcgcagcctgctggaggccttctggactctatcact
aatatctttggtctgtccgagtctccccttttgggacatcgttctcctgatgctgccagg
agacgctcagtctcttccctccccgttgcccaggatcacgtggacactcaccctggttct
gggaaagaagtgagagtgccaacagctgccttgagtgtctttgatgcccatgatggggaa
gtcaatgctgtgcagttcagcccaggttcccgcttactggccacaggaggcatggaccgg
aaagtgaagctttgggaagtgtctggagacaagtgtgaatttaaaggttcgctgtctggc
agtaatgcgggacttacaagtattgagtttgatagtgctggctcctacctcttagcagct
tccaatgattttgcaagccggatctggactgtagatgactatcgattacggcacacactc
acaggacacagtgggaaagtgctctcggccaagttcctgttggacaacgcacggattgtg
tcgggaagtcacgaccggaccctcaaactctgggatctacgcagcaaagtctgcataaag
acagtgtttgccggatccagttgcaatgatattgtctgcactgagcagtgtgtcatgagt
ggacattttgacaagaagattcgtttctgggacatccggtcagaaacaattgtccgagag
atggagcttttggggaagattactgccctggacttgaacccggagaggaccgagctgctg
agctgctcccgtgacgacttactcaaagtgattgatctccgagcaaatgctgtcaagcag
acgttcagcgctcctggattcaagtgcggctctgactggaccagagtggtcttcagccct
gacggcagttacgtggcagcaggctcagccgacggctcgctgtatgtctggagcgtgctc
acggggaaggtggagcaggtgctgatgaagcaacacagctcgtccatcaatgcagtggcg
tggtccccctccgggctgcatgtggtcagtgtggacaaaggcagcaaagccgtgctgtgg
gcgcagccttga
DBGET
integrated database retrieval system
