Ochotona curzoniae (black-lipped pika): 121151142
Help
Entry
121151142 CDS
T11174
Symbol
HDAC4
Name
(RefSeq) histone deacetylase 4
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04371
Apelin signaling pathway
ocz04613
Neutrophil extracellular trap formation
ocz05034
Alcoholism
ocz05203
Viral carcinogenesis
ocz05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
121151142 (HDAC4)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
121151142 (HDAC4)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
121151142 (HDAC4)
05203 Viral carcinogenesis
121151142 (HDAC4)
09165 Substance dependence
05034 Alcoholism
121151142 (HDAC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocz03036
]
121151142 (HDAC4)
Enzymes [BR:
ocz01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
121151142 (HDAC4)
Chromosome and associated proteins [BR:
ocz03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
121151142 (HDAC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
121151142
NCBI-ProteinID:
XP_040828306
LinkDB
All DBs
Position
Unknown
AA seq
1064 aa
AA seq
DB search
MSSQSHPDGLSGRDQPVELLNPPRVNHMPGTVDVAAALPLQVAPSAVPMDLRLDHPFVLP
VAEPALREQRLQQELLALKQQQQLQRQVLIAEFQRQHEQLSRQHEAQLHEHMKQQQEMLA
MKHQQELLEHQRKLERHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVL
NKKKALAHRNLNQCISSDPRYWYGKTQHSSLDQSSPPQSGASASYKHPVLGLYDTKDDFP
LRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTDSACSSAPGSGP
SSPNNSSGNVSSENGVVPATPSVPTEASLAHRLVTRDGSLAPLPLYTSPSLPNITLGLPA
TGPAAGAATPPDADRLALPALQQRISLFPGSHLAPYLSTSPLERDGAAHSPLLQHMVLLE
QPPVAGLGALPLHAQSLVGADRLSPSIHKLRQHHRPLGRTQSAPLPQNAQALQHLVIQQQ
HQQFLEKHKQQFQLHLGQIIPKPSEPARQPESHPEETEEELREHQALLEQPYLDRLSGPK
EAQASAGVHVKQEPIDSDEEGAEPGQRQPTEQELLFRQQALLLEQQRVHQLRNYQASMEA
AGIPVTFGGHRPLSRAQSSPASATFPVTVQEPPAKPRFTTGLVYDTLMLKHQCACGSTNS
HPEHAGRIQSIWSRLQETGLRSQCECIRGRKATLEELQTVHSETHTLLYGTNPLNRQKLD
SSLTSVFVRLPCGGVGVDSDTIWNEVHSAGAARLAVGCVVELVFKVATGELKNGFAVVRP
PGHHAEESTPMGFCYFNSVAVAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYSDPSVLY
VSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDTEYLAAFRTVVMPIA
GEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGHLTKQLMGLAGGRIVLALEGGHDLT
AICDASEACVSALLGNELDPLPDKVMQQRPNANAVRSMEKVTEIHSKYWRCLQRPSTAGR
SLVEVQTCENEEAETVTAMASLSVGVEPAEKRAEEEPMEEEPPL
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccaaagccacccagatggactctcgggccgtgaccaaccggtggagctgctg
aacccgccacgcgtcaaccacatgcctggcaccgtggacgtggccgcggctctgcccctg
caggtggccccctcagccgtgcccatggacctgcgcctggaccacccatttgtgctgccc
gtggccgagcctgcactgcgggagcagcggctgcagcaggagctccttgcgctgaagcag
cagcagcagctgcagagacaggtcctcatcgccgagttccagcggcagcacgagcagctg
tcacggcagcacgaggcccagctacacgagcacatgaagcagcagcaggagatgctggcc
atgaaacaccagcaggagctgctggagcaccagcgcaagctggagaggcatcgccaggag
caggagctggagaaacaacaccgggagcagaagctgcagcaactcaagaacaaggagaaa
ggcaaagagagtgctgtggccagcacagaggtgaagatgaaattgcaagaatttgttctc
aataagaagaaggcgctggcccacaggaacctgaaccagtgcatttccagtgacccccgc
tactggtacgggaaaacgcagcacagctccctggaccagagctccccgccccagagtggg
gcgtctgcctcctacaagcacccggtcctgggcctgtatgacaccaaagacgactttcct
ctgcggaagacagcttctgaacccaacctgaaactgcgatcccggctgaaacagaaagtg
gctgagaggcggagcagcccgctgctccgcaggaaggatgggcctgtggtcactgctctc
aaaaagcgcccactggatgttacagactccgcctgtagcagcgccccaggctctgggccc
agctcacccaacaacagctccgggaatgtcagctccgagaacggcgtcgtgccggccaca
cccagtgtccccactgaggccagcttggcgcacaggctggtgacgcgggacggctcactg
gctccactccccctctacacgtccccgtccctgcccaacattaccttgggacttcctgcc
accggccctgccgctggtgccgccacgccaccagacgccgacaggctggcgctcccggcc
ctccagcagcggatctcactcttccccggctcccacctggccccatacctgagcacctcg
cccttggagcgcgacggggcagcccacagcccgctgctgcagcacatggtgctgctggag
caaccgcctgtcgcaggcctgggagcactgcccctccacgcacagtccctggttggcgca
gaccggctgtccccctccatccacaagctgcggcagcaccaccgcccgctggggcgcacg
cagtcggcgccgctgccgcagaacgcgcaggcgctgcagcacttggtcatccagcagcag
caccagcagttcctggagaagcacaagcagcagttccagctgcacttgggccagattatc
cccaaaccgagcgagccagcacggcagcctgagagccaccccgaggagacggaggaggag
ctccgtgagcaccaggccctgctggagcagccctacctggaccggctctccgggccgaag
gaggcacaggcctcggctggcgtgcatgtgaagcaggagcccatcgacagtgacgaagag
ggggcagagcctggccagcggcagcccacggagcaggagctgctcttcagacagcaagcc
ctgctcctagagcagcagcgcgtgcaccagctgagaaactaccaggcgtccatggaggct
gcgggcatcccagtgaccttcggaggccacaggccgctgtcacgggcgcagtcttcccca
gcatctgccaccttccccgtgactgtgcaagagccccccgcaaagccacgcttcaccaca
ggtcttgtgtatgacacgctcatgctgaagcaccagtgtgcctgtggcagcaccaacagc
caccccgagcatgccgggaggatccagagcatctggtcccgcctgcaggagacaggcctc
cgcagccagtgcgagtgcatccgcggacggaaggccacgctggaggagctgcagaccgtg
cactcggagacccacacgctcctctacggcaccaaccccctcaacaggcagaaactggac
agctccctgacctcggtcttcgtgcggctcccctgcggcggtgtcggggtggacagcgac
accatctggaacgaggtgcactcggcaggggcagcccgcctggctgtgggctgtgtggtg
gaactggttttcaaggtggccacgggggaactgaagaacggctttgctgtggtccgcccc
ccaggacaccacgccgaggagagcacccccatgggcttctgctacttcaactccgtggcc
gtggccgccaagctcctacagcagaggctgaatgtgagcaagatcctcatcgtggactgg
gacgtgcaccatggcaatgggacgcagcaagccttctacagcgaccccagtgtcctctac
gtgtcattgcatcgctatgatgacggcaacttcttcccaggcagcggggcgcccgacgag
gtgggcacagggccaggcgtgggcttcaatgtcaacatggcgttcactggaggtctggac
ccgcccatgggggacacagagtacctggcagcattcagaacggtggtcatgcccatcgcc
ggcgagtttgccccagacgtggtgctggtgtcatcaggcttcgacgccgtggagggccac
cccacgccactcgggggctacaacctctctgccaagtgttttgggcacctgaccaagcaa
ctgatgggcctggctggtggccgcatcgtcctggccctcgaggggggccacgacctgacg
gccatctgtgacgcctctgaagcgtgcgtctctgctctcctgggaaatgagcttgatcct
ctccctgacaaggtcatgcagcagagacccaacgccaatgccgtgcgctccatggagaag
gtcacggagatccacagcaaatactggcgctgcctgcagcgtccgtccactgccgggcgc
tccctggtggaggtacagacgtgtgagaacgaagaagctgagacggtcactgccatggcc
tcactgtctgtgggcgtggagcccgctgagaagagggccgaggaggagcccatggaagag
gagccgcccctgtag
DBGET
integrated database retrieval system
