Ochotona curzoniae (black-lipped pika): 121151242
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Entry
121151242 CDS
T11174
Name
(RefSeq) LOW QUALITY PROTEIN: probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocz01002
]
121151242
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocz04121
]
121151242
Enzymes [BR:
ocz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121151242
Peptidases and inhibitors [BR:
ocz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121151242
Ubiquitin system [BR:
ocz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121151242
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
Dsc3_N
Gal_mutarotas_3
DUF2014
Motif
Other DBs
NCBI-GeneID:
121151242
NCBI-ProteinID:
XP_040828451
LinkDB
All DBs
Position
Unknown
AA seq
2588 aa
AA seq
DB search
MRDLDFIYPMREIQVGGDDLRTSSTDSMNENSTTPPDEHGQGDAPPQQDEEPAFPHTDLV
KLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSDACQRFFRDGLTVSFTKILM
DEAVSGWKFEIQRCIINNTHRLVELCVAKLSQDCFPLLELLAMAFNPHCKFHIYNGTRPC
ESVPTNTPLPEDELFALSSDHRSPKGWLVDLINKFGSLNGFQILLDRFINGSALNVQIIA
AFIKPFGQCYEFLCPHTVKKYFLPVINIIPHLVENLTDEELKKEAKNEAKNDALSMVIKS
LKNLVSRIPEQEATVKVIENFRLKVILRLLQISSFSGKMNALNEINKVISNVSYYTHRHG
NTKEEEWLTAERMAEWIQQNNILSIILRDSLHQPQYVEKLEKILRFVLKEKALTLQDLNN
IWAAQAGKHEAIVKNVHDLLAKLAWDFSSEQMDHLFDCFKASWTSASNKQREKLLELICR
LAEDDKDGVMAHKVLNLLWNLAHSDDVPIDIMDLALNAHVKILDYSCSQDRDTLKIQWID
RLIEELCRNNKWAIPALKQIREICTLFGEAPQNISQIQRSHQIAYRHDLINQLQRDHALV
TLVAENLAEYMNSIRLYARDNEDYDPQTVRLGNRYSHVQEVQERLYFLRFLLKDGQLWLC
APQAKQIWKCLAENAVYHCDREACFKWYSKLMGNKPDLDPDINKDFFESNVLQLDPCLLT
ESGMKCFERFFKAVNHREGKLVAKRRVYMMDDLELIGLDYLWRVVIQSSDDIASRAIDLL
KEIYTNLGPRLQMNQVVIHEDFIQSCFDRLKASYDTLYILDSENNNISCVRQEVIRMVRV
LTVLREYINECDSDYHEERMILPMSRSFRGKHLSLRVRFTNQGRQVDDLNILSHTNDTIG
SIRHCILNRVKANVAHTKVELFVGGELIGSEDDRKPIEQLNLKDKSLITARLTQKNSNIS
SSPYSSSDSSSGSPENHCNQSTDGHGSGVESCLPGVIMSLHPRYICFLWQLADLGSSLNM
PPLRDEARLLMELMPPDNTTIEKLRMICVGQSKLEKSNCDLSLESLFFGSSASQVLYLTK
VIYVLLMPADTSLADNSLEFQFHFLKSGGLSLVLSMLIKNNFLPNIDTETQRGIYFNALK
IAKLLLTAIGYGHVRAVAEACQSVLDGTDPVTKINQVTHGQAVVLHSALQIIPNPSADSM
LRNVSVRLAQQISYEASGYMPDICVIRAIKKITWASGCGALELVFSPNEEITNNYQMNLI
AHHKLKREDEQICCEALEVMTLCFALIPTALDAFSKERGWKTFVIDLLLHCSSKTIRQLA
QEQFFLMCTRCCMGHRPLVFFITLLFTILGSTARERGKHSGEYFTLLCQLLNYAYNSNVN
VPDADVLLNNEIDWLKRIKDAVKNTGETGIEESILEGHLGVTKELMAFQTPEQKYYIGCK
KGGANLIKELIDDFIFPASKVYLQYVKNGELPAEQAVPVCGSPATIRAGFELLVALAVGC
VKNLKEVVDCLTEMYYLDTAITTYEALTEWEYLPPVGPRPPEGFVGLKNAGATCYMNSVI
QQLFMIPSIRNTILVVEGTGTDLEDDMCGEEEKQNSEVNLEPRGDAFAYQFEAKPALNKS
EDRKEYNISVLRHLQIIFGHLAASQLQYYIPRGFWKQFRLWGEPVNLREQHDALEFFNSL
VDSLDEALKALGHPAILSEVLGGSFADQKICQGCPHRYECEESFTTLNVDIRNHQNLLDS
LEQYVKGDLLEGANAYFCEKCDKKVDTVKRLLIKKLPAVLAIQLKRFDYDWEKECAIKFN
DYFEFPRELDMEPYTVAGVAKLGDNISTDSQLTKKNEQYENETVRSTKYRLVGVLVHSGQ
ASGGHYYSYIIQRNKDKQKEHWYKFDDGDVTECKMDDDEEMKSQCFGGDYMGEIPDYMMK
RMSYRRQKRWWNAYILFYERMDTISEDTEMIRYISRLTITRPHQIMMSPVIEKNVRKQNV
QFMHNQMQYSLEYFQFVKKLLTCNSVYLNPGPGQDHLLPEAEEITMISIQLAARFLFTTG
FHTKKIVRGPASDWCDVLCILLRHSKNVRFWFVHNTLFSVSNRLSEYLLECPSAEVRSTF
AKLIVFIAHFSLQDVYCLSTFTSPGPCSQECDSFSLSDHLLRAVLNLLRREVSENGRHLQ
QYFNLFVMYANLGLAEKTQLLKLSVPATFMLVSLDEGPGPPIKYQYAELGKLYSVVSQLI
RCCSVSSRMQSSINGNPPLPNPFGDTNLSQPIMPIQQNVADILFVRTRYVKKIIEDCSNS
EETIKLLCFCCWENPQFSSTVLSELLWQVTYSYTCELWPYLDLLLQILLIEDSWQIHRIH
NALKGIPDERDGLFDTIQRSKNHYQKRAYQCMKCMVALFSSCPVACQILQSNVDLKRKWT
WTVEWLGDELERRPYAGNPQYTYNNWSPPIQSNETSNGYFIERSQSASMTLAKACELCPE
EEPDFQDVTDKDEISPPKRASLYSHSSGSMYQQNNHVHGLPLTGSAALHLSTQKSDQQTQ
EYCESSEEVNSPQIKXSIKCTRLIGFLKILLSCLNIFLTFSMLEWYLKEELLKIYIETIH
CRIFSISL
NT seq
7767 nt
NT seq
+upstream
nt +downstream
nt
atgagggatttggacttcatctatcccatgcgggagattcaagtgggaggggatgacctc
agaacctcatcaactgattccatgaatgaaaattcaacaacacccccagatgaacatggt
cagggtgatgccccaccacagcaagatgaggaacctgcctttccacatactgacctggtc
aagttggatgacatgatcaacaggcctcgatgggtggttcctgttttaccaaaaggagaa
ttagaagtgcttttagaagctgccattgatcttagtaaaaaaggccttgatgttaaaagt
gatgcatgtcaacgtttttttcgagatgggctaacagtatctttcactaaaatccttatg
gatgaggcagtgagtggatggaagtttgaaattcagagatgcattattaataacactcac
cgccttgtggagctttgtgtagccaagttgtcccaagattgctttccacttctagaattg
ttggccatggcctttaatcctcattgcaaatttcatatctacaatggtacacgtccttgt
gaatcagttcccacaaacactccgttaccagaagatgaactatttgctctttcttcagat
catcgatcaccaaaaggttggcttgtggatctcatcaataaatttggcagtttaaatggg
tttcagattttgcttgatcgtttcataaatggatcagcattaaatgttcaaataattgca
gcttttattaaaccatttggacagtgctatgaatttctttgtccacacacagtaaagaaa
tactttctcccagttatcaatataattccacacttagtggaaaatttaactgatgaagaa
ttgaaaaaagaagcaaagaatgaggccaaaaatgatgcactttcaatggttattaaatct
ctgaagaatttagtttcaagaattccagaacaagaagcaactgtaaaagttatagaaaat
tttaggttgaaagtgatacttagattattacagatttcttcttttagtggaaaaatgaat
gcactaaatgaaataaataaggtaatatctaacgtatcttattatactcatcgacatggt
aatactaaggaagaagagtggctaacagctgagcgaatggcagaatggatacagcaaaac
aatattttgtctataatcttacgagatagtcttcatcaaccacagtatgtggaaaagctg
gagaagattcttcgttttgtgcttaaagaaaaagctcttacattacaggatcttaataat
atttgggcagcacaggcagggaaacatgaagccattgtgaagaatgtgcatgatttgctg
gcaaaattggcttgggatttttcttctgaacaaatggatcatctttttgattgctttaag
gcaagttggacaagtgcaagcaataaacagcgtgaaaagctacttgaactgatatgtcgt
cttgcagaagatgataaagatggtgtgatggcacataaagtattaaaccttctttggaat
ctggcacacagtgatgatgtacctatagacatcatggacctagctctcaatgcccacgta
aaaatactagattatagttgttcccaggatcgagatacattaaagatccagtggatagat
cgtcttatagaagaactttgcagaaataacaagtgggcaattcctgcactgaaacaaata
agagaaatttgtactttatttggtgaagcaccacaaaatatcagtcaaattcagcgaagc
caccagattgcttatcgtcatgatttaatcaaccagcttcagcgggatcatgctttagtt
actttggtagcagaaaaccttgcagagtatatgaatagcatcagattgtatgctagagat
aatgaagactatgacccacaaactgtgaggcttggaaatagatacagtcatgttcaggaa
gttcaagaacgactttacttcctcaggttcttattgaaggatggccaactctggctatgt
gctccgcaagccaaacaaatatggaagtgcttagcagagaatgcagtttatcattgtgat
cgtgaagcctgttttaaatggtattccaagttaatgggaaataaacctgacttagatcct
gatattaataaggatttctttgaaagtaatgtgcttcagcttgatccttgcttgttaact
gaaagtggaatgaagtgttttgaaagattcttcaaagcagttaatcatcgagaagggaag
ctagtagcaaaaaggagagtctatatgatggatgatttggagttaataggattagactac
ctttggcgggttgtgattcagagtagtgatgatattgccagcagagctatagatcttctt
aaagagatatatacaaaccttggtcccaggctgcagatgaatcaggtggttatccatgaa
gactttattcagtcttgctttgatcgtctgaaagcatcatatgacacattgtatatcttg
gatagcgaaaacaacaatattagttgtgtgagacaagaagtcatccgaatggtccgagtg
ctaactgttctgagggagtacataaatgaatgtgatagtgattatcatgaagaaagaatg
attttacccatgtccagatccttccgcggcaaacacctgtctcttagagttcgatttaca
aatcagggcagacaagttgatgacttgaacatattatctcatacaaatgatacaattggt
tcaattcgtcattgtattcttaaccgtgttaaagccaatgtagcccatacaaaagttgaa
ctttttgtgggtggtgaattgataggttctgaagatgacagaaagccaattgaacaatta
aatttgaaagacaaatctctaataacagccaggcttacacaaaaaaattcaaacatatct
tcaagtccatatagctcttctgattcatcatctggatcccctgaaaaccattgtaatcag
agcactgatggtcacggttcaggagtagaaagttgtttgcctggtgttataatgtcactg
catccaagatatatctgtttcctttggcaacttgcagatttaggtagcagcctaaatatg
ccgcctcttagagatgaagcaagactgcttatggaacttatgccaccagataacacaact
atagaaaagttaagaatgatatgtgtgggacagtcaaaacttgaaaaaagtaattgtgat
ctatctcttgaatcacttttctttggttcttctgcctcgcaagttctatacctaacaaag
gtaatctatgtgttgttgatgcctgctgatacatctctggctgacaattccttagagttt
caattccatttcctgaaaagtggtggcttgtcccttgtattgagtatgctaataaaaaat
aactttttaccaaatatagatacagaaactcaaaggggcatatactttaatgctcttaaa
atcgcaaaattgttactaactgctattggttatggccatgttcgtgctgtggcagaagct
tgtcagtcagtgctcgatggtacagatcctgtaacaaagattaatcaagttactcatggt
caggcagtggtgctgcatagtgcccttcagatcattcctaatccttctgctgatagcatg
ctcagaaatgtatcagtacgtcttgctcagcaaatatcttatgaggcctcaggatacatg
cctgatatttgtgtaattagagccataaagaaaattacctgggcttcaggatgtggggca
ttagagctagtatttagcccaaatgaagaaatcactaataattatcagatgaaccttatt
gcacaccataagctgaagagagaggatgaacagatttgctgtgaagccttggaagtgatg
acattgtgttttgctttaattccaacagcgttagatgcatttagtaaagaaaggggctgg
aaaacctttgtcattgacttgctattgcactgttccagcaaaaccattcgccagttagca
caagagcaattttttttaatgtgtaccagatgttgcatgggacatcggcctcttgttttc
ttcattactctactctttaccattttggggagcacagcaagagagaggggaaaacattct
ggtgaatatttcacacttctatgtcagctccttaattatgcttacaacagtaatgtaaat
gtacctgatgctgacgttcttcttaacaatgaaattgattggctcaaaagaattaaggat
gctgttaaaaacacaggtgaaacaggtattgaagaatcaattttggaaggccacttgggt
gtcacaaaagagttgatggcctttcaaactcctgagcaaaagtattacattggttgtaaa
aaaggaggtgctaatcttattaaagaattaattgatgatttcatcttccctgcatccaaa
gtttacctgcaatatgtaaaaaatggagaattgccagcagagcaggctgttccagtctgt
ggttcaccagctactatcagggccggttttgaactgcttgtagcattagctgttggctgt
gtaaaaaatctcaaagaggtagtagactgtttgactgaaatgtattacttagacacagca
ataactacttatgaagcacttactgagtgggagtatctgccaccagttggaccacgacca
ccagaaggatttgtaggactcaaaaatgctggtgctacttgttacatgaattcagtgatt
caacaactattcatgattccttctatcagaaatactattcttgtagttgaaggcacaggt
actgatttagaggatgatatgtgtggggaagaggagaagcaaaacagtgaggttaatctt
gaacctcgaggtgatgcatttgcatatcaatttgaagccaaaccagcattaaataaaagt
gaagataggaaggagtataacataagtgttttaaggcaccttcagatcatctttggtcac
ttagctgcttctcaactacaatattatatacccagaggattttggaaacagttcagactt
tggggtgaacctgttaatctccgtgaacaacacgatgctttagagttttttaattctttg
gtggacagtttggatgaagcattaaaagctttaggccatcctgctatactaagtgaagtc
ctaggaggttcctttgctgatcagaagatttgccaaggctgcccacatagatatgagtgt
gaagaatcttttacaactttgaatgtagacatcaggaatcaccaaaatcttctggattct
ttggagcagtatgtcaaaggggatttattagaaggtgcaaatgcatatttttgtgaaaaa
tgtgataaaaaggttgacacagtaaagcgcttgctaattaaaaaattacctgctgtgctt
gctatccaactgaaaagatttgactatgattgggaaaaagaatgtgcaatcaaattcaat
gattattttgaatttccacgtgagctagacatggaaccttacacggttgcaggtgttgca
aaactaggagataatataagtacagacagtcagttaactaaaaagaatgagcagtatgaa
aatgagacagtaagaagcacaaaatacagacttgtgggtgtgctggtacacagcggtcaa
gcaagtggtggacattattattcatacatcattcaaagaaataaagacaagcagaaagaa
cactggtataaatttgatgatggagatgtaacggagtgcaaaatggatgatgatgaagaa
atgaaaagtcaatgttttggtggagattacatgggagaaatacctgattatatgatgaaa
cgcatgtcatataggagacagaaaagatggtggaatgcatatatacttttttatgaaaga
atggacacaataagtgaagatacagagatgataagatatatatcacgtctgactattaca
agaccccatcagataatgatgtcgccagttattgagaagaatgtacggaaacaaaatgtg
cagttcatgcataatcaaatgcagtatagtttagaatattttcagtttgtgaaaaaactg
cttacatgtaatagtgtttacttaaatcctggtccaggacaagatcacctgttacctgaa
gcagaagaaatcactatgattagtattcagcttgccgctagattcctgtttactactgga
tttcacaccaagaagattgtccgaggacctgccagtgactggtgtgatgtcctgtgcatt
ctcctccgtcacagcaagaatgtacgtttttggtttgtgcataacacacttttcagtgtg
tcaaatcgtttgtctgaataccttttggagtgccctagtgcagaagtcaggagtacattt
gcgaagcttatagtatttattgcacatttttccttgcaagatgtttattgtctttcaacc
tttacatctccaggaccttgtagtcaggaatgtgatagcttcagtttgagtgatcattta
ctaagagcagtactaaatctcctgagaagggaagtttcagaaaatggacgtcatttacag
cagtatttcaatttgtttgtgatgtatgccaatctaggcctggcggaaaagacacagctt
ttgaagttgagtgtacctgctacttttatgcttgtttctttagatgaagggccaggtcct
ccaatcaagtatcagtatgctgaattaggcaagttatattcagtggtgtctcagttaatc
cgttgctgcagtgtttcatcaagaatgcaatcttcaatcaacggtaatcctcctcttcct
aatccttttggtgacactaacttatcacaacccataatgccaattcagcaaaatgtggca
gacattttatttgtgaggacaaggtatgtgaagaaaattattgaagactgcagtaattct
gaggagaccatcaaattactttgtttttgctgctgggagaatcctcaattctcatctact
gtcctcagtgaacttctttggcaggttacatattcatatacatgtgagctttggccctat
ttggatctacttttgcaaattttactgattgaagattcctggcagattcacagaattcat
aatgcacttaaaggaataccagatgaacgagatggactgtttgatacaatccaacgttct
aagaatcactatcaaaaaagagcatatcaatgtatgaaatgtatggtggctctgtttagc
agttgtcctgttgcttgccaaatcttacagagtaatgtagatcttaaaagaaagtggacc
tggacagtggaatggcttggagatgaactggaaagaagaccatatgctggcaatcctcag
tatacttacaataattggtctcctcctatacaaagcaatgaaacatcaaatggttatttc
atagaaagatcacaaagtgcaagtatgacacttgcaaaagcttgtgagctctgtccagaa
gaggaaccagatttccaagatgttacagataaggatgaaatatccccacccaaacgtgct
tcattgtattcccattcatctggatctatgtatcaacaaaataaccatgtgcatggactg
ccattgacaggatcagcagcacttcacttgagcactcagaaatctgaccaacaaacacaa
gaatattgtgaaagcagtgaagaagttaattcacctcaaatcaaantatccatcaaatgc
acacgattaattggtttccttaagatcctactctcttgccttaacatttttctaactttt
tctatgcttgagtggtatttaaaagaggaactgctcaaaatctacattgagactattcac
tgtcgtatattctctatcagtttgtaa
DBGET
integrated database retrieval system
