Ochotona curzoniae (black-lipped pika): 121151310
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Entry
121151310 CDS
T11174
Symbol
POP1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1 isoform X1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121151310 (POP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocz03009
]
121151310 (POP1)
03016 Transfer RNA biogenesis [BR:
ocz03016
]
121151310 (POP1)
03029 Mitochondrial biogenesis [BR:
ocz03029
]
121151310 (POP1)
Enzymes [BR:
ocz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
121151310 (POP1)
Ribosome biogenesis [BR:
ocz03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
121151310 (POP1)
Transfer RNA biogenesis [BR:
ocz03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
121151310 (POP1)
Mitochondrial biogenesis [BR:
ocz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
121151310 (POP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
121151310
NCBI-ProteinID:
XP_040828567
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MSNAKERKHAKKMRNQPTNVTLSSGFLAERGAKHQIGGGKLSQAEMQEPHSGTGRLWQAK
MTSHSLSEPDGNELCSSKVMLKKKGGWKAGPEGTSQEIPKYITASTFAQARAAEISAMLK
AVTQKSSNSLVFQTLPRHMRRRAMSHNVRRLPRRLQEMAQKEAEKAVHQKKEHSKTKCHK
ARRCHINRVLEFNRRQKKNRWLETHIWHAKRFHMVKKWGYCLGDRPTGKSHRACYRAMTS
RCLLQDLSYYCCLELKGKEEEILKALSQMCSVDTGLTFAAVHCLSGKRQGSLLLYRANKY
PRQVLGPATFIWKSEMSPGDLATCRQLWIWLHPSLKQDILEEIKTVCQCVEPRLAVDVPS
LLSTPSQEKNQTQLSKERNGKKRKRRDDGEMAGPIKKVAGDGTRAPHQPRSWVSPATGIL
VSDLTMEMNRFRLIGPLSHAVLTEALKAAAVHTEEEGTGETPHRWWMEACKNPDSLSLHR
RQEAIFELLGGVSSPAEIPAGTILGLTIGDPRITMPQKRTKALSSPENCQGKVLDVHCEE
GICTRSWSCAQWKPLSDHTDDPDNEKVRQLLLEGVPVECTHSFIWDQDICKSVTENKISD
QDLNRMRSELLVPGSQLVLGPWESKIPILLIQQPGKVTGEDRLGWGSGWDVLSPKGWGMA
FWIPFIYRGARVGGLKEAAVHCQYQRAPAIPGDYPDSPAGVLFAEEQAKNLLEKYKRRPP
AKRPNYVKLGTLAPFCCPWEQLARDWESRICTQDESWISWSPDGQESTSLGRDVVCAAAE
SERASPPPGVPEEMMLTECQAHSGPRRTGDPALSAVCIAASGTQLCVLRSRKLLKQLSAW
CRPGSEDGRASQRAHGRCQEKLTREACLSILARFPRALVWVSLALLRKGSPEPHSMVCVP
AREDLLQLHQDRHYCGPQEPKHSDPFRSKNLKRQQRKHGGQATAVDLAAGEPVTEPKAPT
RGLWSGPLPAVTAHCSRPLLGFVTQGDFSMAVGCGEALGFISLTGLLHMLTCQPAAQRGL
VLLRPPASPQYRFAHIAIEV
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatgcaaaagaaagaaaacatgctaagaaaatgagaaaccagcctactaatgtg
actttgtcctctggctttttggctgagagaggcgcgaagcatcagattggaggtgggaaa
ctgtcccaagctgaaatgcaagaacctcactctggaactggacgactgtggcaagccaaa
atgacctcccactcactgtctgagcctgacgggaacgagctgtgttcttccaaagtcatg
ttgaagaagaagggaggctggaaagccggtcctgagggcacctctcaggagatccccaag
tacataaccgcttctacttttgcccaggcacgggctgctgaaatcagtgctatgctaaaa
gccgtgacccagaaatcttctaattcgctggtcttccagaccctaccccggcacatgaga
cggagagccatgagccacaatgtccgccgccttcctcgacggttacaggagatggcgcag
aaagaggcggagaaagctgtacatcagaaaaaagaacactcgaaaaccaaatgccacaaa
gcgcgaagatgtcacataaaccgggtgctggaatttaaccgtagacaaaagaagaacagg
tggttggagactcacatctggcacgccaagcggtttcacatggtcaagaagtggggctac
tgcctgggcgacaggccgacggggaagagccacagggcctgctaccgggccatgacgagc
cgctgtctcctgcaggatttatcctactactgttgtttggagttgaagggcaaagaggaa
gaaattctaaaggcgctttctcaaatgtgtagcgtggacacaggactcacctttgcagca
gttcactgcttatccggaaagcgccagggaagcctcctgctttaccgggcaaataaatat
cccagacaggtgcttgggcctgctacattcatttggaaatcagagatgagccccggtgac
cttgccacgtgtcggcagttgtggatctggcttcatccatctctgaaacaggatatctta
gaggagataaaaacggtgtgccagtgtgtagaacccaggcttgctgtggacgttcccagc
ctgctctcaacaccatctcaggagaagaaccaaactcaactgtccaaggagagaaatgga
aagaaaagaaaaagacgagatgatggggagatggctggaccaattaaaaaagtggctggt
gatggaaccagagccccccaccagccgcgctcctgggtctcccccgccacaggcattctg
gtgagcgacttgacgatggagatgaacaggttccggctgattggtccactttcccatgcc
gtgctgaccgaggccctgaaggctgctgctgttcacactgaggaagagggcacaggggag
acgccccaccgctggtggatggaggcctgtaagaaccctgatagcctgtccctgcatcgc
agacaagaagcgatttttgaattattgggaggagtatcatcaccagcggaaattccagca
ggtaccattctgggattgacgattggggatcctcgaataactatgcctcagaagaggacc
aaagctttatccagtccagaaaattgccaaggtaaagttcttgatgttcattgtgaggaa
gggatctgcacccgcagctggtcttgtgctcagtggaagcctctgtctgaccatacagat
gatccagataatgagaaagttagacagctgctcctggagggtgtgcctgtggagtgtacg
catagctttatctgggaccaagatatctgtaagagtgtcacagagaataaaatctcggat
caggatctaaaccggatgagaagtgaattgctggtgcctgggtcacagctggttttaggt
ccctgggaatccaagatccctatactgttgatacagcagccaggaaaagtgactggtgaa
gaccggctgggctggggaagcggctgggatgtcctgtcccccaagggctggggcatggct
ttctggatcccattcatctaccgaggtgcaagagttggaggattgaaagaggctgcagtc
cattgtcagtaccaaagggcgcccgccatccccggtgactacccagactcccctgctggg
gtcctctttgctgaagagcaagccaagaatcttctggagaagtacaaaagacgccctcct
gccaaacggcccaactacgttaagctgggtaccctggcccctttctgctgtccctgggaa
cagctggctcgagactgggagtcaagaatctgcactcaggatgaatcgtggatcagttgg
tctccagatggccaggagagcacctcactgggccgtgatgtggtgtgtgctgctgccgag
tctgagcgagcttctccaccacctggggtgccggaggaaatgatgctgacagagtgtcag
gcccactcggggcccaggaggaccggggaccctgctctcagtgcggtctgcatcgctgcc
tctggcactcagctttgtgtccttaggagtagaaaattactaaagcagctctcggcctgg
tgcaggcccggttctgaggacggccgggcatcccagcgggctcatgggagatgccaggag
aagctgacaagggaggcctgcctgtccattttggcccgtttccccagggccttggtgtgg
gtgagcttggccctgctccggaagggcagccctgagccacacagcatggtctgtgtccca
gctcgggaggatttgctgcagctccatcaggatcgccactactgcgggccccaggaaccc
aagcacagcgacccgttcagaagcaagaacctgaagcgtcaacagaggaagcacggggga
caggccacggccgtggacctggctgcaggggagcctgtgaccgagccgaaagccccaacc
cgggggttgtggtcaggccctctcccagcagtgactgcacactgctccaggcctctcttg
ggctttgtcacgcagggagatttctccatggccgtgggctgtggggaggccctggggttc
atcagcttgacgggcttgttgcacatgctgacctgccagccggcagcccagcggggcctg
gtgctgttgaggccccccgcctccccgcagtaccggtttgcacacattgccattgaggtc
tga
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