Ochotona curzoniae (black-lipped pika): 121151530
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Entry
121151530 CDS
T11174
Symbol
RNF40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocz04121
]
121151530 (RNF40)
Enzymes [BR:
ocz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121151530 (RNF40)
Ubiquitin system [BR:
ocz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
121151530 (RNF40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
BRE1
zf-C3HC4_2
EzrA
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-rbx1
ZapB
SpoIIE
Motif
Other DBs
NCBI-GeneID:
121151530
NCBI-ProteinID:
XP_040828929
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
MSGPGNKRAASDGGSGPPEKKLNREEKTTTTLIEPIRLGGISSTEEMDLKVLQFKNKKLA
ERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLRCHESQGELSS
GTEAPGTQEGLVRVGTPLIEPGTSELRESLPMQLRPPLSEPALAFVVALGASSSEEVELQ
LQGRMEFSKAAVSRVVEASDRLQRRVEELCQRVYSRGDSEPPNEVARARTRELGRENRRL
QDLATQLQEKHHRISLEYSELQDKVTSAETKVLEMETTVEDLQWDIEKLRKREQKLNKHL
AEALEQLNSGYYVSGSSAGFQGGQITLSMQKFEMLNAELEENQELANSRMAELEKLQAEL
QGAVRTNERLKVALRSLPEEVVRETGEYRLLQAQFSLLYNESLQVKTQLDEARGLLLATK
NSHLRHIEHMESDELGLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPIN
REMRHLISSLQNHNHQLKGDAQRYKRKLREVQAEIGKLRAQASGSTHSISSLGHPEDAGL
SAPVPGKEEGAPGPVGTPTSRKEMASAPGATTATTSLKKEELVPSEEDAQALTPGAQGPS
SRSREPEARPKRELREREGPTLGPAPIASALSRADREKAKVEEAKRKESELLKGLRAELK
KAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKAKAEVDELRGRIRELEERDRRESKK
IADEDALRRIRQAEEQIEHLQRKLGATKQEEEALLSEMDVTGQAFEDMQEQNGRLLQQLR
EKDDANFKLMSERIKANQIHKLLREEKDELGEQVLGLKSQVDAQLLTVQKLEEKERALQG
SLGGVEKELTLRSQALELNKRKAVEAAQLAEDLKVQLEHVQTRLREIQPCLAESRAAREK
ESFNLKRAQEDISRLRRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVL
TKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYIS
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggcccggcaacaaacgcgccgccagcgacgggggctcaggacccccagaaaag
aagctgaaccgcgaggagaagaccaccaccacccttatcgagcccattcgtcttggaggc
atctcctccacggaggagatggacctgaaggtgctgcagttcaagaacaagaagctggcc
gagcgtctggagcagcggcaggcctgtgaggacgagctccgcgagcgcattgagaagctg
gagaagcgccaggccaccgacgatgccacactgctcattgtcaaccgctactgggcgcag
ctggatgagaccgtggaagccctcctccgctgtcacgagagccaaggggagctgtcctca
gggacagaggcgcctgggactcaggaggggctggtgcgggtcggcaccccgctcatagag
ccggggacctcggagctgagggagtccctgccaatgcagctgcggcctccgctcagcgag
ccggccctggcctttgtggtggccctgggggccagcagcagtgaggaggtggagctgcag
ctgcagggccggatggagttctccaaggcggctgtgtcgcgggtggtggaggcctcggac
cggctgcagcgccgagtggaggagctctgtcagcgagtgtacagccgaggggacagtgaa
cccccaaacgaagtggctcgggcccgcactcgggaactgggtcgtgagaaccggaggctg
caggacttggccacacagctgcaggagaagcaccaccgcatctcgttggagtactctgag
ctccaggataaagtgacgtcggcggagaccaaagtgctagagatggagacgacggtggag
gacctgcagtgggacatcgagaagctccgcaagcgtgagcagaagctcaacaagcacctg
gcagaggccctggagcagctcaactccggctactacgtgtctgggagctctgcaggcttc
caggggggccagatcacgctcagcatgcagaagtttgagatgctgaatgcggagctggag
gaaaaccaggagttggccaacagtcgaatggcggagctggagaagctgcaggctgaactc
cagggagctgtgcggaccaacgagcgcctcaaggtagccctgcggagcctgcccgaggag
gtggtgcgggagacgggggagtaccgcttgctgcaggcccagttctcgctgctctacaac
gagtccctgcaagtgaagacgcagctggatgaggcgcgggggctgctgctggctaccaag
aactcccacctgcggcacatcgagcacatggagagcgatgagctgggactgcagaagaag
ctgcgcacggaggtcatccagctggaggacacgctagcccaggtccgcaaggagtatgag
atgctgcgcatcgagttcgagcagaacctggcagccaacgaacaggcagggcccatcaac
cgggagatgcgccacctgattagcagtctccaaaaccacaaccaccagctaaagggggat
gcccagcggtataagcggaagcttcgagaggtgcaggctgagattggcaagctccgggct
caggccagtggctccactcactccatttccagcctgggccacccagaggacgctggtctt
agtgccccagtccctgggaaagaagagggtgccccaggccccgttgggacccccaccagc
aggaaggagatggcttcagctcctggtgccaccactgccaccacttcgttgaagaaagag
gagctggttccctccgaggaggatgcccaggccctcactcctggggctcagggaccctcc
tcacggagccgagaaccggaggccagacccaagcgggagcttcgggaacgagaagggccc
accctggggcccgcacctatagcttcagctctctccagggcggatcgagagaaggccaag
gtggaggaggccaagaggaaggagtcagaactgctaaagggtctgcgggctgagctcaaa
aaggcccaggaaagccagaaggagatgaagctgctgctggacatgtacaagtcagcccca
aaggagcagcgggacaaggtgcagctcatggccgccgagcgcaaggccaaggctgaggtt
gatgagctgcggggccgcatccgggagctggaggaacgggatcggagggagagcaagaag
attgccgatgaggatgccctgaggcgcatccggcaggccgaggagcagattgaacatctg
cagcgcaagctgggtgccaccaagcaggaggaggaggctctcctgtccgagatggacgtg
acgggtcaggcctttgaagacatgcaggagcagaacgggcggctgctgcagcagctgcgg
gaaaaagatgacgccaacttcaagctgatgtccgagcgcatcaaggccaaccagatccac
aagctgctgcgtgaggagaaggacgagctgggcgagcaggtcctaggcctcaagtcccag
gtggatgcccagctgctgaccgtgcagaagctggaggagaaggaacgggccttgcagggc
agcctcgggggtgtggagaaggagctgacgctgcgcagccaggcactggaactcaacaag
cggaaggctgtggaagccgcccagctggcggaggacctgaaggtgcagctggaacacgtg
cagacgcggctgcgtgagattcagccctgcctggccgagagccgggctgcgcgtgagaag
gagagcttcaacctcaagagggcacaggaggacatctcgcggctgcggcgcaagctggag
aagcagcggaaggtggaggtctatgccgacgccgatgagatcctccaggaggagatcaag
gagtacaaggcgcggctgacctgcccctgctgcaacacccgcaagaaggatgcagttctt
actaagtgcttccacgtgttctgcttcgagtgcgtgcggggccgctatgaggcccgccag
aggaagtgccccaagtgcaacgctgcctttggtgcccacgacttccatcgcgtctacatc
agctga
DBGET
integrated database retrieval system
