Ochotona curzoniae (black-lipped pika): 121151663
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Entry
121151663 CDS
T11174
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121151663 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121151663 (GSPT1)
03012 Translation factors [BR:
ocz03012
]
121151663 (GSPT1)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
121151663 (GSPT1)
Translation factors [BR:
ocz03012
]
Eukaryotic type
Release factors
121151663 (GSPT1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
121151663
NCBI-ProteinID:
XP_040829247
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MDPGSGGGGGGGGGSSGGSSDSAPDCWDQADMEAPGPGPCGGGGGSLAAAAAAEAQRDHL
SAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAQPPPAPASNPGAGGVAGGPSGKKKKKK
FKKWGPEHAPVEPSCSSPLFFFDCSNSAISMELSEPVVENGETEMSPEESWEHKEEISEA
EPGGGSLGDGRQAEDSAQEMMEEEEELPKPKSVLAPPGAPKKEHVNVVFIGHVDAGKSTI
GGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETE
KKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTA
GVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLK
EQSDFCPWYIGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQ
QLVMMPNKHNVEVLGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFILCDANNLCHSG
RTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQD
QVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggatccgggcagcggcggcggcggtggcggcggcggcgggagcagcggcggcagcagc
gactcggcgcccgactgctgggaccaggcggacatggaagccccggggcccgggccgtgc
ggcggcggcggcggctccctggcggcggcggcggcggccgaggcccagcgtgaccacctc
agcgcggccttcagccggcaactcaacgtcaacgccaaacccttcgtgcccaacgtccac
gccgccgagttcgtcccgtctttcctgcggggtccggcgcagccgccgccagccccggcc
agcaaccccggagccgggggcgtcgcgggaggcccttcgggtaaaaaaaaaaaaaaaaaa
tttaaaaagtgggggccggagcacgcgccagttgagccatcatgctcatccccccttttt
ttttttgactgctcaaattcagctattagcatggaactttcagaacctgttgtagaaaat
ggagagacggagatgtccccagaagaatcatgggaacacaaagaagaaataagtgaggcc
gagccggggggtggctccctgggagatggaaggcaagccgaggacagtgcccaggaaatg
atggaggaagaagaagagctcccgaagcccaagtctgtgctggcacctcccggtgccccc
aaaaaggagcacgtgaatgtggtgttcattgggcatgtggatgctgggaagtcaaccatt
ggaggacaaataatgtatttgactggaatggttgataaaaggacgctcgagaaatatgaa
agagaagctaaagaaaaaaacagagaaacttggtacttgtcttgggccctagatacaaat
caggaagaacgagacaaaggtaaaacagtagaagtgggtcgtgcctactttgaaacggag
aagaagcatttcacaattctagatgcgcctggccacaagagctttgtccctaatatgatt
ggtggcgcctctcaagctgatttggctgtgctggtcatctccgccaggaaaggagagttt
gaaactggatttgaaaaaggaggacagacaagagaacatgcaatgttggccaagacggca
ggtgtaaaacacttaattgtgcttattaataagatggatgacccgacagtaaattggagc
aacgagagatacgaagaatgtaaagaaaaactagtgccatttttgaaaaaagttggcttc
aatcccaagaaggacatccacttcatgccctgttcagggctgacgggagcaaacctcaaa
gagcagtcagatttctgtccttggtacattggattaccatttattccatatctggataat
ttgccaaacttcaatagatcagttgatggaccaatcagactgccaattgtggataagtac
aaggatatgggcactgtggtcctgggaaagctggaatcgggatccatttgtaaaggccag
caacttgtgatgatgcctaacaagcacaatgtggaagttcttggaatactttctgatgat
gtagaaactgattctgtagccccaggagaaaacctcaaaatcagactgaaaggaattgaa
gaggaagagattcttccaggtttcatcctttgtgatgctaataacctttgtcattctgga
cgaacatttgatgcccagatagtgattatagagcacaaatccatcatctgcccaggttat
aatgcggtgttgcatattcatacctgcattgaggaagttgagataacggccttaatctgc
ttggtagacaaaaagtcaggagaaaaaagtaagactcgaccacgttttgtgaaacaagat
caagtgtgcatcgctcgtttgcggacagcgggaaccatctgccttgagacctttaaggac
ttccctcagatgggtcgtttcaccttaagagatgagggtaagaccattgcaattggaaaa
gtgctgaaactggttccagaaaaagactaa
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integrated database retrieval system
