Ochotona curzoniae (black-lipped pika): 121151673
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Entry
121151673 CDS
T11174
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04612
Antigen processing and presentation
ocz05145
Toxoplasmosis
ocz05152
Tuberculosis
ocz05164
Influenza A
ocz05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
121151673 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
121151673 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
121151673 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
121151673 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
121151673 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ocz01001
]
121151673 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ocz04054
]
121151673 (CIITA)
Enzymes [BR:
ocz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
121151673 (CIITA)
Protein kinases [BR:
ocz01001
]
Serine/threonine kinases: Other
TAF1 family
121151673 (CIITA)
Pattern recognition receptors [BR:
ocz04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
121151673 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
Motif
Other DBs
NCBI-GeneID:
121151673
NCBI-ProteinID:
XP_040829272
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MNHFQAILTQVQMLLSCHGQKQVRALLDHLLEEELLSREYHCALLHEPDGEALARKISLT
LLEKRDLDVALLGWAQSGWQAPAAERSPELKDHAGGGSCATMELGSLEGRYLELLNSDAD
PLHLYHFYDQISLAAEEEIELCSEPYTDTINCDQFSRLLCDIEGDEETREAYANIAELDQ
YVFQDSQLEGLSKDIFIEHIGSDDMIGENAEVPVEAVQESQKRPFPEECPVDLKQRKLAE
PPTVPGVTGSFLVGPITDASAQPCLPPPAPLSQEPASSHACREETIQTPASPSLSCTNLA
AGPIQFIPTLSTPPQWLWQIPGAGNGISSVFICHGKLPQASQAPPPSSPAVHSLPKSPDR
PGSTSPFAPSSADLPSMPEPALTSRADIIEDGMHPTESQEPREVSSKLPKWPEPVRQLWH
SLQDKFQAEPEGPDGIQMEVALVRAQLERNGTKSQDRELATLDWAERQLAHGGPAEVLLA
AGKHRRPRETRIIAVLGRAGQGKSHWAWAVGRAWARSQLPQFDFVFHIPCHCLDRPGDTY
RLRDLLLSPESSSLAVDDEVFSHVLRRPERVLLILDAFEELEAQEGFLPSVGGLGASEPC
SLRGLLAGLLQRKLLPGCTLLLMARLRGRLGQSLSKADALFELAGFSAEQAQAYVACYFE
RSGAPEQREQALTLLRDRPFLLSHCHSPTLCRVACQLAQASLERGDRAPLPSTLTGLYVE
LLGPAIRAGPPGALLGLARLAWESGRRHQSTLQKGHFPSEELRTWAVARGLVQPGPGATE
AELAFPSFLLQCFLGAIWLALSCEVKDKELPQYLALTPRKKRPYDNWLEGVPRFLTGLLF
QPHARCLGALMGSEAATVVDRKQKVLTRYLKRLQPGTLRARRLLELLHCAHEAEEAGIWQ
HVVRELPARLSFLGTRLTPPDVHVLARALEAAGRDFSLDLRSTGIDPCGLASLVGLTHVG
SFRSNLSDTVGLWESLQQRGETKLLHAAEEKFTIEPFRAKSLKDVEDLGNLVQTQRMRST
STDEAGDLPAVRDLKKLEFALGPTSGPQAFPKLVKVLTAFSSLQHLDLDSLSENKIGDEG
VSQLAATFPQLKSLETLNLSQNSITDVGACKLAEALPSLAASLLRLSLYNNCICDVGAGS
LAQVLPDMVSLRVMDVQYNKFTAAGAQQLAASLRKCPHVETLAMWTPTIPFGVQEHLQQL
DSRISLR
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacttccaggccatcctgactcaggtccagatgctgctctcttgccatgggcag
aagcaggtgcgggctctcctggaccacctgctggaggaagagcttctctccagggagtac
cactgtgccctgctccatgagcctgatggtgaagcgctggccaggaagatctccttgact
ctacttgagaaaagagacctggacgtggccctcttgggatgggcccagagtgggtggcag
gctccagcagcagagaggagccctgagctcaaggatcatgctggtggtggatcgtgtgcc
accatggagttggggtctctggaagggaggtacctggaacttctcaacagtgatgctgat
cccttgcacctgtaccacttctacgaccagatcagcctggctgcagaagaagagattgag
ctttgctcagaaccctacacagacaccatcaactgtgaccagttcagcaggttgctgtgt
gacattgaaggtgatgaagagaccagggaggcttatgccaacatcgcggaactggaccag
tatgtgttccaggactcccagctggagggcctgagcaaagatattttcatagaacacata
ggatcagacgacatgattggtgagaacgcggaggtgccagtggaagcggtgcaggagagt
cagaagagacccttcccagaggagtgtcctgtggacctgaagcagcggaagctagctgaa
cctcctacggtgcctggggtgacaggcagtttcctggtggggccaataacggatgcctca
gcccagccctgtctaccgccacctgccccgctcagccaggagcccgcatccagccatgcc
tgccgggaggaaaccatccagacacctgcatccccctccttgagctgcacgaacctcgct
gctggacccatccaattcatccccactctctccactccaccccagtggctctggcaaatc
ccaggggctgggaatggcatctccagtgtattcatctgtcatggcaagctgccccaggcc
agccaggcaccgcctcccagcagccccgctgtccacagcctcccgaagtccccagaccga
cctggctccaccagcccgttcgctccatcttcggcggacctgcccagcatgcctgagcca
gccctgacctcccgtgcagacataatagaagacggtatgcatccgaccgaatcccaggaa
cctcgggaggtctccagcaagcttccaaagtggcctgagccagtgaggcagctctggcac
tcactgcaggacaagttccaggctgagcctgaaggcccagatggcatccagatggaggtg
gctctggtgagggcacagctggagaggaatggcaccaagagccaggacagggaactggcc
acgctggactgggctgagaggcagctggcccacgggggtccggctgaggtgcttctggct
gctggcaaacaccggcggccacgagagacacgcatcatcgccgtgctgggtagggccgga
caggggaagagccactgggcctgggccgtgggtcgggcctgggcccgcagccagctccca
cagttcgactttgtcttccatatcccctgccactgcttggaccgccccggggacacctac
cgcctacgcgacctgcttctgtctccagagtcgtcatcgctggcagtggatgacgaggtc
ttcagccatgtactgaggaggcctgagcgtgttctgctcatcctggatgccttcgaggag
cttgaagcccaggagggctttctgcccagcgtgggtggccttggggcctcagagccctgt
tccctccgggggctgttggctggtctcttgcagcgcaagctgctgccaggctgcaccttg
ctcctcatggcccggctgcggggccgcttgggccagagcctgagcaaggccgacgccctg
tttgagctggctggtttctcagctgagcaggcccaggcctatgtggcatgctactttgag
cgttccggagcccctgagcagcgagagcaagccctgacactcctgcgggaccggccgttc
ctgctcagtcactgccacagcccaaccctgtgccgggtggcctgccagctggcgcaggcc
tctctggagcggggagacagggccccgctgccctccacactcacgggactctacgtggag
ctgctgggccctgccatcagggctggccccccaggcgccctgctgggactggccaggctg
gcctgggaatcaggcagaaggcaccagagtacactgcaaaagggtcacttcccatcagag
gagctcaggacgtgggccgtggccaggggcttggtgcaaccaggcccaggtgccacggaa
gctgagctggccttccccagcttcctcctgcagtgcttcctgggtgccatatggctagcg
ctgagctgcgaggtcaaggacaaggagctaccacagtatttggcgctgaccccgaggaag
aagaggccctatgacaactggttggagggtgtgccgcgcttcctcactgggctcctcttc
cagcctcatgcccgctgcttgggtgccctcatggggtctgaggcagccaccgtggtggac
cggaagcagaaagtgctcacaagatacctgaagaggctgcagccagggacactgagggca
cggcggctgctggagctgctgcactgtgcccacgaggccgaggaggctggcatctggcag
catgtggtgcgggaacttcccgcccgcctctcgttcctgggcacccggctcacacccccc
gacgtgcacgtgctggctagggccttggaggcggctggccgagacttctccctggacctc
cgcagtactggcattgatccctgcgggctggctagccttgtgggactcacccatgtcggc
agtttcaggtccaacctgagtgatacagtggggctgtgggagtccctgcagcagcgtggg
gagaccaagctactccatgcagccgaggagaaattcaccattgagccttttcgagccaag
tcgctgaaggatgtggaagacctgggcaaccttgtgcagacccagaggatgagaagcacc
tccacagacgaagccggagacctccctgctgtccgggacctgaagaaactggagtttgcg
ttagggcccacctcgggcccccaagcctttcctaaactggtgaaggtcctcacagccttt
tcctcgcttcagcatctggacctggattctctgagtgagaacaagatcggggatgaaggt
gtgtcacagctcgcagccaccttcccacagctgaagtccctcgagacactcaacctgtca
cagaatagcatcactgatgtgggcgcctgcaagctggccgaggccctgccctcacttgct
gcatccctgctcaggctgagcttgtataataattgcatctgtgacgtgggagccgggagc
ctggcccaagtgcttccagacatggtgtccctgcgggtgatggacgtccagtacaacaag
ttcacagctgccggggcccagcagctcgccgccagcctgaggaagtgccctcacgtggag
acgctggcgatgtggacgcctaccatcccttttggtgtccaggaacacctgcagcagctg
gactcacgcatcagcctgagatga
DBGET
integrated database retrieval system
