Ochotona curzoniae (black-lipped pika): 121151734
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Entry
121151734 CDS
T11174
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
KO
K13175
THO complex subunit 6
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121151734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121151734
03041 Spliceosome [BR:
ocz03041
]
121151734
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
121151734
Spliceosome [BR:
ocz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
121151734
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EML_2
NBCH_WD40
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_IP5PC_F
Beta-prop_IFT122_1st
WDR54
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
121151734
NCBI-ProteinID:
XP_040829416
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MERSVPLAVPLGQMEVFQALQRLHMTIFSQSISPCGKFLAAGNNYGQIAVFSLSAALSSE
AKEESKKPVVTFQAHDGPVYSMVSTDRQLLSAGDGEVKAWLWAEILKKGCKELWRRQPPY
RTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGTFTRALRGHTDYIHCLALRERS
PEVLSGSEDGSVRLWDLRTAKEVQTVEVYKHEECARPHNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTIFPIRAPQKHVAFYQDLILSAGQGRCVNQWQLSGELKAQVPGSSPGL
LSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLGYRAFSLSF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagcgctccgtgccgctcgccgtgcctttgggtcagatggaggtgttccaggccctg
cagcggctgcacatgaccatcttctcccagagcatctccccgtgtgggaagttcctggct
gccggcaacaattacgggcagatagctgtcttcagcctgtctgctgctctgagctcagaa
gccaaggaggaaagtaagaagcccgtggtgaccttccaagcgcatgatgggcctgtctac
agtatggtctccactgaccgtcagctgctcagcgccggagacggggaggtgaaggcctgg
ctttgggccgagatcctcaagaagggctgcaaggagctgtggcggcgtcagcccccatac
aggactagcttggaagtgcctgagatcaacgccctgctgctggtccccaaggagaactcc
ctcatcctggctgggggagactgccagctgcacaccatggaccttgagactgggaccttc
acacgggccctgcggggccacacagactacatccactgtctggcgctgcgggagcggagc
cccgaggtgctgtcaggcagcgaggacgggtctgtgcggctttgggacctccgcacagcc
aaggaggtgcagacggtcgaggtgtacaagcacgaggagtgtgcgaggccccataatggg
cgttggatcggatgcctcgcaacggactcagactggatggtctgtggaggaggcccagcc
cttaccctctggcacctccggtcctccacgcccaccaccatctttcccatacgggcgccc
cagaagcatgtcgccttctaccaggacctgattctgtccgccggccagggccgttgtgtg
aaccagtggcagctcagcggggagctcaaggcccaggtgcccggctcttccccgggactg
ctcagcctcagcctgaaccagcagccggcagcccctgagtgcaaggttctgacggcggct
ggcaacagttgccgggtggatgtcttcaccaacctgggctaccgcgccttctccctgtcc
ttctga
DBGET
integrated database retrieval system
