Ochotona curzoniae (black-lipped pika): 121151870
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Entry
121151870 CDS
T11174
Name
(RefSeq) phospholipid-transporting ATPase ABCA3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121151870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocz02000
]
121151870
Transporters [BR:
ocz02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
121151870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
AAA_30
SRP54
AAA_29
AAA_22
AAA_27
Elongin_A
Motif
Other DBs
NCBI-GeneID:
121151870
NCBI-ProteinID:
XP_040829656
LinkDB
All DBs
Position
Unknown
AA seq
1671 aa
AA seq
DB search
MTSSWPIQFSALLWKNFLLKGRQIIGLVVEILLTFLFFHLILTMRRNAQSPLFNASTFNP
VSFKLPNSITVIQPEFQIVYVPSNSEVAKNITEWVKRDLKVNFTVRGFPSEKKFEDYVNS
QNSPPVLVAIVFDHDFQNKDSLPLQVKYHLRFSNYTFDRNSLQRSTWSRQSASWDTAFLF
PEVPTLGPRNPRRSDGGNPGYIRRGFLAVQHSVDKAIISYHSDNAGIILAGLNIFARRFP
YPAYHHDNFMWVFIGLFPWIVVFVFSHNVLSIVGTIVSEKESRLKEYQLMIGLSNSMLWA
AYFVTYFIMYGIIILLLYGVLFLKLAHERVLQYSDPSVVVLFLLCYVTSLIIFAFMISTF
FTNASLAVAITGFFYFVSFFPQVIIVAQYAQMSFTQKITSCLIANIALAIWIDLLCKSEM
KRIGVQWDNLFSPVIPGDTFTLGHVFIMLLVDACLYGLVTWYIEAVFPGEYGVPKRWYFF
LQKSYWFGHPTSKINENIELSDFEESYYFEAEPVGLVAGIQIQHLRKEFKLPNNTTFVAV
KDLTLNFYEDQITVLLGPNGAGKTTTLSILTGFYLPTSGKIYISGYDISKDMVHVRKSLG
LCPQYDLLFPNMTVSEHLVFYCAIKGVPSKGRSEEMNKMLASFGLLQKRNELSKSLSGGM
KRKLSIMIALIGGSKVVILDEPTTGMDPVSRRSTWDVLQQYKKGRTMLLTTHYMDEADTL
GDRIAIMVKGTLQCCGSSIFLKKRYGVGYHLVIVKNPNCDVERISVLIFDYVPTAALEND
VAAELSFLLPKEYTYRFEDMFAELEERQEELGIAAFGVSMTTLEEVFFAVSEKAEGKESL
QNRYRNQNMNAPRNIRSTRRSTLRRSITSMKLNSGWNHFLQQCHAMILKRALYNWRNWKV
LLLQLVGLLGAIYFQMSGVAFARQQEPALKMDLEQYGQTIVPYSVNFNNVFVQNFIKILE
ETLKAKKQKLKEVKGDLLEYLSKDQQCTYSCIVAYSVEVVGFRTTITFWFNNEAFHSPSL
SLALLDDTIFKSLSGSSASITVSNKPQPRGTSNTPRDRRTSGIQIALNLFFGMSILVSGF
CLLTVNERISKAKHIQFLSGVYVFIFWFSSLMWDFIILFLACCLLLVVFLLAELDLLIKN
FRYLDTLFIFTIFAWSVIPFLYLTCFLFNSSTSAYMKLFVFNQCIGFFGVVMDFVLSNMQ
GVNTAIKSVILNTLLLVPFYNLGMSICKYYDFQEEKALCSSSANVPTTAPCEECDRNVYS
MNDNTIGRYVIAMAATGFAYFLLILFLDTYAWRLKTFVFQYIFFGVYKKFNKETVSRELS
GESEDEDIEEETYRVLSQPLKLLNATVVIRQLIKIYFKIPAVLAVRNISLAVQKKECFGL
LGLNGAGKTTTFQILTAEDIATSGDVFVEGFSITKNNMKIRSKIGYCPQFDALLEYMTAR
EIMTMYARLWGVKESMIPTYVNNFLRLLELESHADKYIYTYSGGNKRRVSNAIAMMGKPA
IIFLDEPSTGMDPVARRLLWNVVTQTRETGKAVIITSHSMEECDALCTRLAIMVQGKFVC
LGSPQHLKNKFGNVYTVNIKFKPGTDEDTVNEFKSFIERVFPGSKLTQESQGFLNYYIPS
KKNSWGKVFGVLEKAKEKFELEDYSISQITLEQVFLSFANLATTGRQNIEP
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atgacttcatcatggcccatacaattttcagccctcctctggaagaattttcttttaaag
ggtcgacagataattggtctagtcgtggaaatactcttgacatttctattctttcatttg
atcttgactatgcgcagaaatgcgcaaagcccactttttaatgcttctacttttaatcct
gtttcattcaagctacccaattccatcactgttattcaacctgaatttcaaatcgtttat
gtgccttctaatagtgaagtagcaaaaaatattactgagtgggtgaaaagagatttaaaa
gtcaatttcacagttcgtggctttccttcagaaaaaaaatttgaggattatgttaacagc
caaaattctcctcctgtactggttgccattgtatttgatcatgatttccaaaacaaagac
agcttgccgcttcaggtaaaatatcatctacgttttagtaattacacttttgaccgtaat
agtttacaaaggtcaacctggagtcgacagtcagcaagttgggatacagcatttctcttt
ccagaagtgcctacgctagggcccaggaacccgagaaggagcgatggaggaaatcccggg
tacatcaggagagggtttctggctgtgcagcattccgtagataaagctatcatttcatat
catagtgacaatgctggaataatcttggctggattgaacatttttgctagaagatttcca
tatcctgcctatcaccatgataattttatgtgggtttttataggtttatttccttggatt
gttgtatttgtgttttctcacaatgtacttagcattgttgggaccattgtgtcagaaaag
gaaagccgcctaaaggagtatcagctcatgataggactcagtaatagtatgctttgggct
gcctattttgtcacgtactttatcatgtatggaattattatccttttgctgtatggagtt
ctatttctcaagcttgctcatgagagagtccttcagtacagtgacccctcagtcgttgtt
ctgtttctcctgtgttatgtcaccagcttaataatttttgcttttatgattagcacattc
ttcactaatgcttctttggctgtcgctattactggttttttctattttgtcagcttcttt
ccacaagtaatcattgtagctcagtatgcacaaatgagcttcactcagaagataacttcc
tgtctgattgcaaatattgcactagctatttggattgatttactgtgcaagtcggaaatg
aaaaggattggagtccagtgggataaccttttttcacctgtgatcccaggagacacgttc
actttgggccatgtgtttataatgcttttagttgatgcttgtttgtatggccttgtgacc
tggtatatagaagctgtctttccgggggagtatggtgtgcccaagagatggtatttcttt
cttcagaaatcttactggtttgggcatccaacctcaaagataaatgaaaatattgagctt
tcagattttgaggaaagttactattttgaagctgaacctgttggtttggtggctggtatc
cagatccaacatttgcgcaaggaattcaaactaccgaataatactacctttgtagctgta
aaagacttgactttgaatttttatgaggaccagatcacagtgcttctgggacccaatgga
gcaggaaagacaaccactttatctattcttactggtttctatcttcctaccagtggaaag
atctacattagtggatatgacatctcaaaggacatggttcatgtcaggaaaagtttgggc
ttgtgcccgcagtatgacctgctgtttccaaatatgacagtatctgaacatcttgttttt
tactgtgcgataaagggagtgccttccaagggtcgttcggaagaaatgaacaaaatgctg
gcttcttttggcctgcttcagaagcgtaatgaactttctaagtcactcagtggaggcatg
aagcgcaagctctctattatgattgcccttatagggggctccaaggtagtgatacttgat
gaaccaacaactggcatggatccagtctcaaggagaagcacatgggatgttctccagcag
tataaaaagggtcgaaccatgttactgaccacccactatatggatgaagcagacaccctg
ggtgaccgcatagccatcatggtcaaggggactctgcagtgctgtggctcgtccattttt
ctgaagaaaagatatggtgtgggataccatttagtcatagtgaagaatcccaactgtgat
gttgaaagaatctctgtcttgatttttgattatgtaccaactgccgctttagagaacgat
gttgcagctgaattatcatttctgttaccgaaagagtatacgtacagatttgaagacatg
tttgctgagctggaagaacgccaggaagagctgggcatcgcagcatttggtgtctctatg
actaccttagaagaagttttctttgcggtcagtgaaaaggcagagggaaaggagagtctt
caaaacagataccgtaaccagaatatgaatgcacccagaaacattcggagtacacgtcgt
agcaccttgcgtcggtctattacctccatgaaactcaatagtgggtggaaccatttcctc
cagcagtgccatgctatgatcttaaagagggcattgtacaattggcgcaactggaaggtg
ctgctgctccagttggtggggcttcttggtgccatttattttcaaatgagtggtgtggcc
tttgcaaggcagcaagagcctgccctgaaaatggatttggaacaatatggtcaaaccatc
gtgccttactcagttaatttcaacaatgtgtttgttcagaattttatcaaaatccttgaa
gaaacattgaaagctaagaaacaaaagttgaaggaagtaaaaggtgaccttttggaatac
ttgtcaaaagatcaacagtgcacatactcatgcattgttgcatattccgtggaagttgtt
ggattcagaaccaccatcaccttttggttcaacaatgaggcattccactcaccctcattg
tccctggcgctattagacgatactatttttaagtcactttctggttcttctgcttccatt
acagtctccaacaaacctcagcctcggggtaccagtaatacacccagagatagaagaaca
tcaggaatccagatagcccttaatttgttttttggtatgagtattttggtcagcggtttt
tgcctcctgacagtgaatgagagaatcagtaaagcaaagcacatccagtttttgagtggt
gtctatgtgtttattttctggttttcttctctgatgtgggattttatcatcctctttcta
gcttgctgtttactgctggtggtgttcttactcgctgagctggacttattgatcaagaac
ttccgctatctggacacactgtttatctttacaatttttgcttggtctgttattcccttc
ttatacctaacatgcttcttgttcaatagtagcaccagtgcctacatgaagctcttcgta
ttcaaccaatgcataggattttttggtgtggttatggattttgtgctaagcaacatgcag
ggtgtaaacactgctataaaaagtgtcatacttaatacactcctgctggtgcccttttat
aaccttgggatgagcatttgcaaatattatgattttcaagaagaaaaagcattgtgttcc
tcctcagcaaacgttcctaccactgccccgtgtgaagaatgtgatcgcaatgtatatagt
atgaatgacaatacaattggacggtatgtgattgcaatggctgccacaggatttgcttac
tttttattaattctctttctggatacatatgcatggagattgaaaacatttgtgtttcaa
tatattttctttggtgtctacaaaaaatttaataaggaaaccgtgtccagggaattatct
ggagaatctgaagatgaagatatagaagaggaaacatacagagttctgagccagcccctg
aaattgctgaatgccacagttgttattaggcaactcataaagatctattttaagattccg
gcagtcctggctgtgagaaatatctcccttgctgtccaaaaaaaggagtgctttgggctg
ctgggattgaatggagctgggaaaacgactaccttccagattttgactgcagaggatatt
gctacctccggggatgtgttcgttgaaggctttagcatcaccaaaaataacatgaagata
aggtcaaaaataggctattgtccacagtttgacgccttgctggaatacatgactgctcga
gaaataatgacaatgtatgccaggttgtggggtgtcaaagagagcatgattcccacttac
gtgaacaattttttgagattgctggaactggaatcccatgctgacaagtatatctatact
tacagtggaggaaacaaacgtagagtaagcaatgccattgctatgatgggaaaacccgca
ataatcttcctggatgagccatccactggcatggacccagtagcccgacgtctcctctgg
aatgtggtgacacagacacgcgaaactggaaaagctgtcatcataacctcccacagcatg
gaagaatgtgatgctctttgtactaggctggcaatcatggtgcagggaaagtttgtgtgc
ctgggaagccctcaacacctcaagaataaattcggcaatgtttacactgtgaatatcaaa
ttcaagcctggtacagatgaggatacagtaaatgaatttaaatcatttatcgagagagtt
ttcccaggcagcaaattgacacaagagagtcaaggattccttaattattacattcccagt
aagaaaaatagctggggaaaggtgtttggagttttggagaaagctaaagagaaattcgag
ctagaagattattccatcagtcagataaccctggaacaagtgttcctgagctttgctaat
ttagctacaacaggtcgtcagaatattgaaccatga
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