Ochotona curzoniae (black-lipped pika): 121152061
Help
Entry
121152061 CDS
T11174
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121152061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocz03009
]
121152061
Ribosome biogenesis [BR:
ocz03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
121152061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Utp13
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_Aladin
ANAPC4_WD40
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_IP5PC_F
Ge1_WD40
Beta-prop_WDR35_TULP_N
WD40_like
Utp12
WDR54
Motif
Other DBs
NCBI-GeneID:
121152061
NCBI-ProteinID:
XP_040829919
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MDEPAAAVGRFKANYAVERKLEPFYKGGKAQLDGTGQHLFCVCGSRVNILDVASGAVLRS
LEQEDQEDITAFDLSPDSEVLVTASRALLLAQWAWREGTVTRLWKAIHTAPVATMAFDPT
STLLATGGCDGAVRVWDVVRHYGTHHLRGSPGVVHLVAFHPDPARLLLFSSAADSAIRVW
SLHDRSCLAVLAAHYSSVTSLAFSKDGHTMLSSGRDKICIVWDLRNHQVTRTVPVFESVE
AAVLLPEEPAPDLGVTSPGLHFLTAGDQGALRVWEAASGQCVHTQPPWPGPGRELSHCSL
APAAGLLLTVTTDHNLLLYDVRSLQLRKQFAGYSEEVLDVRFLGPEDSHIVVASNSSCLK
VFELRTSACQLLPGHTDTVLALDVFRKGWLFASCAKDHSVRIWRMNKAGQVSCVAQGSGH
THSVGAICCSRLKESFLVTGSQDCTVKLWPLPGALLAKGTAPGDGPTLLQAQTTQRCHDK
DINSVAVAPNDKLMATGSQDRTAKLWALPQCQLLGVFAGHRRGVWCVQFSPMDQVLATAS
ADGTVKLWSLQDFSCLKTFEGHDASVLKVVFVSRGTQLLSSGSDGLVKLWTIKNNECVRT
LDAHEDKIWGLHCSRLDDRALTGASDSCVIVWKDVTEAEQAEAQAKHEEQVVRQQELDNL
LHERRYLRALGLAISLDRPHTVLTVVQAIRKDPEAREKLEATVLRLRRDQKEALLRFCVT
WNTNSRHCHEAQAVLGVLLRHEAPQELLAYEGVRATLEALLPYTERHFQRLSRTLQAATF
LDFLWHNMKLSPLPAAPPALPNT
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcccgcggccgcagttggccgcttcaaggccaactatgccgtcgaacgcaag
cttgagccgttctacaagggcgggaaggcacagctggatgggactggccagcacctgttc
tgtgtgtgtggcagccgagtcaacatcctggatgtggcctcaggggctgtgctgcggagc
ctggagcaggaggaccaagaggacattactgccttcgacctcagccccgacagtgaggtg
ctggtgacagctagccgggcactgctgctggctcagtgggcctggcgggagggcacggtc
acccgcctgtggaaggccatacacacagcccctgtggccaccatggccttcgacccaacc
tccacactgctagccaccggtggctgcgatggcgcggtgcgtgtgtgggacgtggtgcgg
cactacgggacacaccacctccggggctcccctggcgtcgttcacctggtggccttccac
ccagaccccgctcgcctgctgctcttctcctcagcggcggattctgccatccgcgtgtgg
tcgctgcatgaccggtcctgcctcgctgtgctggctgcccactacagctcggtgacctcg
ctggccttcagcaaggatggccacaccatgctcagttctggtcgggacaagatctgcatc
gtctgggacctccggaaccaccaggttacaagaaccgtgcccgtgtttgagagcgtggag
gctgccgtgctgctcccggaggagccagcgccagacctgggtgtcacgtctccaggcctg
cacttcctgaccgctggtgaccaaggtgcactgcgcgtgtgggaggcggcttctggacag
tgtgtgcacacgcagccgccgtggccgggccccgggcgggagctgagccactgcagcctg
gcccccgccgctggcctgctgctgaccgtcacgacggaccacaacttgctgctttacgat
gtgcgttccctgcagctgcggaagcagtttgctggctacagcgaggaggtgctagatgtg
cggtttctcgggcctgaggattcccacattgtcgtggcctccaacagctcctgcctcaaa
gtgttcgagctgcggacgtcagcctgccagctgctgcctggccacacagacactgtcctg
gccctggacgtgttccggaagggctggctgtttgccagctgcgccaaggatcacagtgtc
cgcatctggaggatgaacaaggctggccaggtgtcctgtgtggctcagggctctgggcac
acgcacagtgtgggtgccatctgttgctccaggctcaaggagtccttcctggtgaccggc
agtcaggactgcacagtgaagctgtggccactgcctggggccctgctggccaagggtaca
gccccgggtgacgggcccaccctcctgcaagcccagaccacccagcgttgccatgacaag
gatatcaacagtgtggctgtcgctcccaatgacaagctgatggctacgggctcacaggat
cgcacggccaagctctgggccctgccacagtgccagctgctgggcgtgttcgccggtcac
cggcgtggcgtatggtgtgtccagttctcgcccatggaccaggtgctggccaccgcctca
gctgacggcacagtcaagctctggtcgctacaagacttcagctgcctcaagacattcgag
gggcatgacgcatcagtgctgaaggtggtcttcgtgagccgtggcacacagctgctgtcg
agcggctctgacgggctggtgaagctgtggaccatcaagaacaacgagtgcgtgcggaca
ctggatgctcatgaggacaagatctggggcctgcactgcagccggctggatgaccgtgcg
ctcaccggtgccagtgactcctgcgtcattgtctggaaggatgtgacagaggcggagcag
gcagaggcacaggccaagcacgaggagcaagtggtcagacagcaggaactcgacaacctg
ctgcatgaaagacgctacctccgagcgctgggcctcgccatctccctggaccggccccac
acagtgctgacagttgtccaggccatccggaaggaccctgaggctcgagagaagctggag
gccacggtgctccgactgcgcagggaccagaaagaggccctgctgcgcttctgcgtcacg
tggaacaccaattcgcgccattgccatgaggcccaggctgtgctgggcgtactcctgcgg
cacgaggccccccaggaactgctagcctatgagggcgtgcgagccaccctggaggccctg
ctgccctacactgagcggcacttccagcggctcagccggacgctgcaggcagccaccttc
ctggatttcctgtggcacaacatgaagctgtccccactccctgcggcccccccagccctc
ccgaatacatag
DBGET
integrated database retrieval system
