Ochotona curzoniae (black-lipped pika): 121152128
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Entry
121152128 CDS
T11174
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03013
Nucleocytoplasmic transport
ocz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121152128 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
121152128 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121152128 (THOC1)
03041 Spliceosome [BR:
ocz03041
]
121152128 (THOC1)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
121152128 (THOC1)
Spliceosome [BR:
ocz03041
]
Complex C
Other components
EJC/TREX
121152128 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
121152128 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
121152128
NCBI-ProteinID:
XP_040829950
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLSTFGQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIAGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKVSWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERASDTKPTRVVRKRAAPE
DFLGKGPSKKILMGNEELTRLWNLCPDNMEACKSETREYMPSLEEFFEEAIEQADPENMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEMYASKLGEQWKILAPYLEMKDSEIR
QIECDSEDMKMRARQLLVAWQDQEGVHATPENLINALNKSGLSDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgactccgccgctcttcagtttgcccgaagcgcgtactcggtttacgaaatct
accagagaggccctgaacaacaaaaatatcaagccgctgttgagtacatttggccagtta
cctggcagtgaaaatgaaaaaaaatgtactcttgaccaggctttcagaggtgttcttgaa
gaagaaattataaatcattcctcgtgtgaaaacgttttagctattatttctcttgctatt
gcgggcgtaactgaaggtatttgcactgcatctacaccttttgtattgttgggagatgtt
ttggattgtcttcctttggatcaatgtgacacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaatacattttattctgctgggaagaactatctactgcgtatgtgc
aatgatctcctaagaagattatctaaatcacagaatacagtcttctgtggacgaattcaa
ctctttttggccagactatttcctctctctgaaaagtcaggtcttaacctgcagagtcaa
tttaacctggaaaatgtcactgtttttaataccaatgagcaggaaagcaccctgggtcag
aagcacactgaggatagagaagaaggaatggatgtagaagaaggtgaaatgggagatgat
gaagctccaacaacttgctccatcccaatcgattacaacctgtatcgaaaattctggtca
cttcaggattacttcaggaaccctgtgcaatgctatgagaaggtttcatggaaaactttt
cttaagtattctgaagaagttttagcagtttttaagagttataaattagatgatactcag
gcttcaaggaaaaagatggaggaattgaaaacaggaggagaacatgtatattttgcaaaa
tttttaacaagtgaaaagttgatggatttacagctgagcgacagtaactttcgtcgacac
atcctgttgcaatatctcattttattccaatatctcaaagggcaggtcaaattcaaaagt
tcaaactatgttttaaccgatgagcaatcactgtggattgaagatactacaaaatcggtc
taccaactactatctgaaaacccccctgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagagcatcggatacaaagcccacaagagtagtgcggaagagagcagccccagag
gacttcctagggaagggacccagcaagaaaattcttatgggaaatgaagaattaacaagg
ctttggaatctctgtcctgataatatggaagcctgtaaatctgagacaagggaatacatg
ccatcgctcgaggaattctttgaagaagccattgagcaggcagaccctgaaaatatggtt
gaaaatgagtacaaggccgtgaacaattcaaactacggttggagagccctgagactgtta
gcacggagaagccctcacttcttccagccaaccaaccagcagtttaaaagtttgcctgag
tacctggaaaacatggtgataaagctagccaaggagttgccacctccttctgaagaaata
aaaacgggtgaagatgaagacgaggaagataatgatgctttactgaaggaaaatgaaagt
cctgatgttcggcgggacaagcctgtcaccggggaacaaatagagatgtatgccagcaag
ttgggtgaacagtggaagattctagctccctacctggaaatgaaagactcagaaattagg
cagattgagtgtgatagcgaagacatgaagatgagagctagacagctcctcgttgcctgg
caagatcaagagggagtgcatgcaacgcccgagaacctgattaacgctctcaacaaatct
ggattaagtgaccttgcagaaagtctaactaatgacaatgagacaaatagttag
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integrated database retrieval system
