Ochotona curzoniae (black-lipped pika): 121152195
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Entry
121152195 CDS
T11174
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin alpha-5-like
KO
K16493
protocadherin alpha
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
121152195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocz03036
]
121152195
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocz04515
]
121152195
Chromosome and associated proteins [BR:
ocz03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
121152195
Cell adhesion molecules [BR:
ocz04515
]
Cadherins
Protocadherins
121152195
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_FAT4_N
Ig_Cad99C_N
Ig_CLSTN
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
121152195
NCBI-ProteinID:
XP_040830060
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MLYFHRAGSEAPRLLLWLLLLFAAWRAGSGQLRYSVPEEAKHGTFVGRIAQDLGLQLAEL
VPRLFRVASRGGADLLEVNLQNGILFVNSRMDREELCGRSAECSVHLEVLVERPLQVFHV
EVEVRDINDNAPAFSRPEQTLFILESRLPDSQFPVEGASDLDIGANAELRYKLNSNEYFD
LDVKSNEEGTNVLKLVLKKPLDREETQEHRLLLTAVDGGRPELTGTVQLLVSVLDANDNA
PEFDKSVYNVRLLENTPNGTLVIKLNASDADEGINKEIDYFISNLVIEEVKSKFVINSES
GEIRVRGHLDYEEDNLYEINVDAVDRSAFPLTGHCKVIVKLLDVNDNTPELTITSLFLPV
KEDAPLGTVIALISVSDRDSGPNGQVTCSLEPHVPFKLVSTYKNHYSLVLDSGLDRESVS
GYDVVVRARDAGSPPRWASASVRVEVADVNDNAPQFAQAEYTVFVKENNAPGCHIFTVTA
HDADAQENARVSYSLVERRVGGRALSSYVSVHGESGRVYALQPLDHEELEVLRVEVSARD
AGAPPLGSNVTLQVFVLDENDNAPWLLARGSGGPAGAAVAASELVPRSAGAGHVVTKVRA
VDLDAGYNAWLWFELQAAPAGGARCPFRVGLYTGEISTTRALDELDAPRQRLVVLVRDHG
EPALTATATVLVSLVDGGQASPSWSRASVAAGASASASAGALGGASSLVDVNVYLVVAIC
AVSSLLVLTLLVWAAARWSSGAASEGACVSGPAAAAAAALVCSSAVGSWSCSQRRRQRVC
SGEGPPKADLMAFSPSLPHGPTSTDNDNVSFXILIHSNLLLIYWC
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgctgtattttcacagagcaggttctgaagctccgcgcctgctgctctggcttctgctg
ctctttgcagcctggcgggcagggagcggccagctgcgctactcggtccccgaggaggcc
aaacacggcacgttcgtgggccgcatcgcgcaggacctggggctgcagctggccgagctg
gtgccgcgcctgttccgggtggcgtccaggggcggcgcggacctgctggaggtgaatctg
cagaatggcatcttgttcgtgaattctcggatggaccgtgaggagctgtgcgggcgcagc
gcggagtgcagcgtgcacctggaggtgctggtggagcgtcctctgcaggtgttccacgtg
gaggtggaggtgagggacatcaatgacaatgcgcccgcgttctccaggccagaacagaca
ttgtttattttagagtcaaggctgccggattctcagtttccagtggagggcgcgtcggac
ttggatatcggagccaatgcagagctgaggtacaaactaaactccaatgagtattttgac
ttggatgttaaatcgaatgaagaagggaccaacgtgttaaagctggtgttgaagaaacct
ttagatagagaagaaacccaagaacatcgtttattactgactgcagtggatggagggaga
cccgaactcacaggaaccgttcagttattggtcagtgtgctggatgccaatgacaacgct
ccagaattcgataaatctgtttataacgtcaggctgttggaaaatactcccaatggaaca
ttagtgattaaactaaacgcctcagatgcagatgaaggcatcaataaggaaattgactat
ttcattagtaaccttgtgattgaggaagtaaaatctaagtttgtaattaattctgagagt
ggtgaaataagagtgaggggacacttggactatgaagaggacaatttgtatgaaattaat
gttgatgctgtggatagaagtgcatttcccctgactggacattgcaaagtaatagtgaaa
ctgctggacgtgaatgacaacactccggaactgaccatcacctcacttttcctgcctgtc
aaggaggacgccccactgggcacagtcatcgccctcatcagcgtgtccgaccgcgactcc
ggcccaaacggacaggtcacctgctccctcgagccccacgtgcccttcaagctggtgtcc
acctacaagaaccactactcgctggtgctggacagcggcctggaccgcgagagcgtgtct
ggctacgacgtggtggtgagagcgcgcgacgcgggctcgcccccgcgctgggccagcgcc
agcgtgcgggtggaggtggccgacgtgaacgacaacgcgccgcagttcgcgcaggccgag
tacacggtgttcgtgaaggagaacaacgcgccgggctgccacatcttcacggtgacggcg
cacgacgcggacgcgcaggagaacgcgcgcgtgtcgtactcgctggtggagcgtcgcgtg
ggcgggcgcgcgctgtcgagctacgtgtctgtgcacggcgagagcggccgcgtgtacgcg
ctgcagccgctggaccacgaggagctggaggtgctgcgcgtggaggtgagcgcgcgcgac
gcgggcgcgccgccgctgggcagcaacgtgacgctgcaggtgttcgtgctggacgagaac
gacaacgcgccctggctgctggcgcgcggctcgggcgggcctgcgggggcggcggtggct
gcgagcgagctggtgccgcggtcggcgggcgcgggccacgtggtgaccaaggtgcgcgcg
gtggacttggacgcgggctacaacgcgtggctgtggttcgagctgcaggcggcgcctgcg
ggcggcgcgcgctgcccgttccgcgtgggcctgtacacgggcgagatcagcacgacgcgc
gccctggacgagctggacgctccgcggcagcggctggtggtgctggtgcgggaccacggc
gagccggcgctcacggccacggccacggtgctggtgtcgctggtggacggcggtcaggcg
tcgccgtcgtggtcgcgggcatcggtggcggctggcgcctcggcctcggcctcggcgggc
gcgctgggtggtgcgtcgtcgctggtggacgtgaacgtgtacctggtggtggcgatctgc
gcggtgtcgagcctgctggtgctgacgctgttggtgtgggcggcggcgcggtggtcgtcg
ggtgcggcgtcggagggcgcgtgcgtgtcgggtccggcggcggctgcggcggcggcgctg
gtgtgctcgagcgcggtggggagctggtcgtgctcgcagcggaggcggcagcgggtgtgc
tctggggagggcccgcccaaggccgacctcatggccttcagccccagccttcctcatggt
cccacctccaccgacaatgacaacgtgagtttttaaattcttattcacagcaatttgctt
ctaatttattggtgttaa
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