Ochotona curzoniae (black-lipped pika): 121152455
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Entry
121152455 CDS
T11174
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocz03000
]
121152455 (RAI1)
Transcription factors [BR:
ocz03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
121152455 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
121152455
NCBI-ProteinID:
XP_040830460
LinkDB
All DBs
Position
Unknown
AA seq
1965 aa
AA seq
DB search
MQSFRERCGFHGKQQSYQQPSPETSRLENYRQPSQASLSCDRQRLLAKDYYSPQPYPAYE
AGASGSSAAAADKYHRAGKALPSPQQGLQGRPAFAGYGVQDSGPYPARYSGEEGLQAWGA
PQPPPPPPPPPPPPPSQPQPPPPPPQPQPQPLPGGVGKYEENLMKKTPGVPPGRQYPEQG
SQLPFQTHSLHVPPPPPQPPQPLAYPKLQRQKLQSDLASALPFSQGAHFPQHTQSFPAAA
GAHSYKSCTAPSAQPHDRALTTSTSLAPGQRVQNLHAYPSGRLGYEQQPAPQPQPQQPQQ
QQQPQQQPPPPPSRHHGQESLHYQHLAKYPHYGQQGQGYCQAEAAVRTPEQYYQNFSPSS
GHSPARSVGRSPSYSSTPSPLMPNLETFPYGQQPLAAAATGTFPPGLADHSHFMPLLNPS
PTDAGGSMDPQGGNCKVLPKDKVPEALLSDLSLQSLTALTSQVENISNTVQQLLLSKAAL
PHKKPAKSLASRTPEQYKSQHCSPEGSGYSAEPAGTPQSAHAEPQDADYLSGSEEALERG
GFLYCSQARGSPARGSGSGGGGGSSKAKPESVSTCSVTSPDDMSTKSDDSFQSLHSTLPL
DSFSKFVAGERDCPRLLLSALAQEDLTSEILGLQEAMGEKADKAWPEGPGLAKDAGKPPP
PPPPPFSLGNHSACLDPVARNTWARAGEPEALADALQLDKGGGSAKDFSPGLFDDPSSAA
FVAPECKKHTSSLSFGAKPALGAVATAGPDPTVAAAAAFDCFPDTPATVASSADGANPFA
WPEENLGDACPRWGLHPGELTKGLEQAGKAAEGVGKGDAHEVAAAAAACLAFQDEEPPGE
KAAVLPGDFKQEEAGGGGGSSGVKEEAGGLLECPDVGKDARWLEDSRHCCSAADFGDLPL
LPPAARKEDLEAEEEYSSLCQLLGSPGQRPSLQDPLSPKGPLLCTKEEVEEVLEAKAGWG
SPCHLSGDSVILLGPTVGTESKVQSWFESSLSHMKPGEEAPDGGGERAPGESADPVLAQK
PSKPAVPEAPIAAKKEPVPRGKSLRSRRVQRGLPEAEDSPCRAPALPKDLLIPDSCTGPP
QAQMEGVGAPGRGASEGLPRMCTRSLTALSEPRMPVPPGLTTTPAPPDKLGGKQRAAFKS
GKRVGKPSPKAASSPSNPAALPVASDSSPVGSKTKETDSPGGAGKDQRSMILRSRNKAPH
QNAKRRRRPSESRLPNSRAAKKLLANSHLPAANTNATFKASEGPPPKEGRVGPRARVPKP
GAGGKLPERPVHALKRKSAFMAPVPAKKRGLVLRSGSDGKDEPPEDAPALFKRVTLSPKK
AKLAKGSGEPAAKPLAVEAGTGGGGDACLKLAPRGAFPGAMKTKVLPPRKGRGLKLEAIV
QKITSPSLKKFACKTPGVPGDPGSPGLPEKDRAALRGAGGSPPGAEAGLPVAAGPGGQKL
LAVAELPCGNPASRSFKGKPGTGKKLPSSGDPSTFPEATTQPSSGAPKKRSRKGRAGALG
PCRGPLDKRPYAGPALHLASRDRAGGGSGGSGGTAGGGSDDSSGAGGKKPKMEEELGPAP
QPHEGRPCQPQTRAQKQPGQTAAGGPGYGGSYSKRKRLPRGRAKNAASSPCKGRAKRRRQ
QQQMLPLDPAEPEIRLKYVSSCRRLRADSRTPAFSPFVRVEKRDAFTTVCTVVNCPGDEP
RRQPSSSSASSSSDAASLPGGSVPQPRPSLPLSSTMHLGPVVSKALNAPCLVCCLCQNPA
NFKDLGDLCGPYYPEHCLPKKKPKLREQVRPEDACKEASPPLERTFKGLECGAAAAAAVA
PTAAAAAAAGKPPRPDGPVDPSKQGSLRTSARGLSRRLQSCYCCYGQGDGGEEVPPNDKS
RKHECGKQAPAEPGGDTQEHWVHEACAVWTSGVYLVAGKLFGLQEAMKVAADMSCSSCQE
VGATLGCCHEGCTHSYHYPCASDAGCLFMEENFSLKCPKHKTLPL
NT seq
5898 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccttccgagagaggtgtggtttccatggcaagcagcagagctaccagcagccc
tcgccggagacatcgcgtctggagaattaccggcagccgagccaggccagcctgagctgt
gaccggcagcggctgctggccaaggactattacagcccgcagccctacccggcctatgag
gcaggcgcctctggcagctcagcagctgctgccgacaagtaccaccgggccggcaaggcg
ctgccctcgccgcagcaaggcctgcaggggaggccagccttcgcgggctatggtgtccag
gacagcggcccttatccggctcgctactcgggcgaggaaggcctgcaggcctggggtgcc
ccacagccccctccgccgccacccccaccccctcccccacctccatcacagccacagcca
ccgcccccgccaccacagccccagccccagcccctgccaggcggggtaggcaagtacgag
gaaaacctgatgaaaaagacgccaggggtgccccctggccggcagtatccagagcagggc
tcccagctgccgtttcagacacactccctgcacgtgccgccacctccgccgcagccccct
cagcccctggcctaccccaagctccaaagacagaaactgcagagtgacctggcctccgcc
ctgcccttctcccagggcgcccacttcccccagcacacccagtccttccccgcagccgct
ggcgcccactcctacaagagctgcacagcgccctccgcacagccccacgacagagcgctg
accaccagcaccagcctcgcgccgggccagcgcgtccagaacctgcacgcctacccgtcg
ggccgcctgggctacgagcagcagcctgcgccgcagccgcagccgcagcagccacagcag
caacagcaaccgcagcagcagccaccgccaccgccgagccggcaccacggccaggagagc
ctccactaccaacacctcgccaagtacccacactacgggcagcaaggccagggctactgc
caggccgaagcggccgtcaggacccccgagcagtattaccagaacttcagccccagctcc
ggccactcgcccgcccgctccgtgggccgctctccctcctacagctccacgccctcgccg
ctcatgcccaacctggagaccttcccttacggccagcagcctctcgccgcggctgccacc
ggcaccttccccccgggactcgccgaccacagccacttcatgcccctgctcaacccctcg
cccacggacgcagggggctccatggacccccagggaggcaactgcaaggtgctgccgaag
gacaaggtgcccgaggcactgctgtccgacctcagcctgcagagcctcacggcgctgacg
tctcaagtagagaacatctccaacacggtgcagcaactgcttctgtccaaagccgccctg
ccgcacaaaaagccagccaagagcctggcatccaggacccccgagcagtacaagagccag
cactgcagccccgagggcagtggctactcggctgagccggcgggcacgccgcagtcggcc
catgccgagccgcaggatgccgactacctgagcggctccgaggaggccctggaacgtggc
ggcttcctctactgcagccaggcccgaggcagcccagcccggggcagcggcagcggcggc
ggcggcggctcgtccaaggccaaacccgagtcggtgtccacctgctccgtgacctcgccc
gatgacatgtccaccaaatccgatgactccttccagagcctgcacagcaccctgcccctc
gacagcttctccaagttcgtggctggcgagcgggattgcccgaggctgctgctgagcgcg
ctggcccaggaggacctgacctccgaaatcctgggactgcaggaggccatgggggagaaa
gccgacaaggcttggcccgagggcccgggcctggccaaggatgctggcaagccaccaccg
ccgcccccgccgcccttctcactggggaaccacagcgcctgcctggaccccgtggccagg
aacacctgggcccgggcaggggagcctgaggctctggctgacgctctgcagctggacaaa
ggcgggggcagcgccaaggacttcagccccggtctgttcgatgacccctcctccgcggcc
tttgtggcccctgagtgtaagaaacataccagttccctgtcctttggtgccaagcccgcg
ctcggggctgttgccactgctgggccagacccaaccgtggcggcggcagcagctttcgac
tgcttcccggataccccagccactgtggccagctcggccgatggcgccaaccccttcgcc
tggccggaggagaacctgggtgatgcgtgtccccgctggggactgcaccccggggagctc
accaagggcctggaacaggctggtaaggctgcggaaggggtcggcaaaggggatgcccat
gaggtcgccgccgctgccgctgcctgcctggccttccaggacgaggagcccccgggggag
aaggcagctgtgttgcccggggacttcaagcaggaggaggctggcggcggcggcggcagc
agcggggtgaaggaggaggccggcgggctgctggaatgccccgacgtgggcaaggacgca
cggtggctagaagacagccggcactgttgctcggctgccgacttcggggacctgccgctg
ctgccacctgcagccaggaaggaagacctggaggctgaggaggagtactcctccctgtgc
cagctgctgggcagccccgggcagcggcccagcctgcaggacccgctgtcacccaagggc
ccgctgctgtgtaccaaggaggaggtggaggaggtactggaggccaaggcgggctggggc
tccccgtgccacctgtcgggggactcggtcatcctgctgggccccaccgtgggcaccgag
tccaaggtgcagagctggttcgagtcctccctgtcccacatgaagccgggggaggaggcg
cctgacggcggcggggagcgggcgcctggggagtcggccgacccggtgctggcccagaag
cccagcaagccggccgtgcccgaggcacccattgctgccaagaaggagccggtgcccagg
ggcaagagcctgcggagccggcgggtgcagcgggggctgccggaggccgaggactcccct
tgccgggcccccgcgctgcccaaagacctgctcatcccggattcgtgcacagggcccccg
caggcgcagatggagggcgtcggggcccccgggcggggggcctcagagggtctccccagg
atgtgtacgcgctcgctcacggccctgagcgagcctcgcatgcccgtccccccgggcctg
accaccaccccggcgcccccggacaagctagggggcaagcagcgggctgccttcaagtcg
ggcaagcgggtggggaaaccctcgcccaaggctgcgtccagccccagcaacccagccgcc
ctgccggtggcctcagacagcagccccgtgggctccaagaccaaggagacagactccccc
ggcggcgcgggcaaggaccagcgctccatgatcctccggtcccgcaacaaagccccgcac
cagaacgccaagcggcggcggcggccctcggagagccggctgcccaacagccgcgcggcc
aaaaagctgctggccaacagccacctgccggccgccaacaccaacgccacgttcaaggcg
tccgagggacccccaccgaaggaggggcgggtgggcccacgagccagggtgcccaagccc
ggggcgggcggcaagctgcccgagcggccggtgcacgcgctcaagcgcaagtcggccttc
atggccccggtgcccgccaagaagcgcggcctggttttgcgcagcgggagcgacgggaag
gacgagccgcccgaggacgcccccgctctgttcaagagggtcaccctgtcccccaagaag
gccaagctggccaagggcagcggcgagcccgccgccaagcccctcgccgtcgaggcgggc
accgggggcggcggtgacgcgtgcctcaagctggccccccggggggccttcccgggagcc
atgaagaccaaggtgttgccgccgcggaaaggccggggcctcaagctggaagccattgtg
cagaagatcacatcgcccagcctcaagaagtttgcctgcaagacgccaggggtccccggg
gaccccggcagcccgggcctgcccgagaaggaccgtgctgccctcaggggggctgggggc
agccccccgggcgcggaagcagggctcccggtggccgcgggtcctggggggcagaagctc
ctggccgtggccgagcttccctgtgggaatccggccagccgctccttcaaaggcaaaccg
gggaccggaaagaagctgccctcctcgggggacccttccaccttccccgaagccaccacg
cagccctcctcgggggcgcccaagaaaagaagccgcaaaggcagggccggggcgctgggc
ccctgcagaggccccctggacaagcggccctatgcggggcctgcgctgcacctggcgtcc
cgagaccgggccggcggtggcagcggtggcagtggtggcacagccggcggaggcagcgat
gacagctccggggcgggaggcaagaagccgaagatggaggaggagctgggcccggccccc
cagccccacgagggccggccctgccagccccagaccagggctcagaaacagccaggccaa
actgccgccgggggtcccggctacggtggcagctactccaagcgcaagcggctcccccgg
ggccgggccaagaacgcagcatcctccccctgcaagggtcgggccaagcggcggcggcag
cagcagcagatgctgcccctggatcccgctgagcctgaaatccgcctcaaatacgtttcc
tcctgcaggcggctgcgggccgacagccggaccccggccttctcgcccttcgtgcgggta
gagaagcgtgatgccttcaccaccgtgtgcacggtcgtcaactgccccggggatgagccc
cgcaggcagccttcctcctcctctgcctcctcctcctcggacgcggcctcgctgcccggg
ggctccgtcccgcagccgagaccctccctgccgctctcctccaccatgcacttggggcct
gtggtgtccaaggccttgaacgccccttgccttgtctgctgtctttgccaaaacccggcc
aacttcaaggacctcggggacctctgtgggccctactacccggaacactgcctccccaaa
aagaagccaaaactcagagagcaggtgcggcccgaggacgcctgcaaggaggcctcccca
cccctcgagagaacattcaagggcctcgagtgtggggcggcggcggcggctgctgtggcc
cccactgctgctgctgccgccgccgccgggaagccccctaggcctgacggccccgtggac
cccagcaagcagggctcgctgcgcaccagcgcccgcggcctgtctcggcggctgcagagc
tgctactgctgctacgggcagggggacgggggcgaggaggtgccccccaacgacaagagc
cggaagcacgagtgcggcaagcaggcgcccgcagagcccggtggggacacgcaggaacac
tgggtgcacgaggcctgcgccgtgtggaccagcggggtctacctggtggccggcaagctc
tttgggctgcaagaggccatgaaggtggccgcggacatgagctgctccagctgccaggag
gtcggggccaccctcgggtgctgccacgaaggctgcacgcacagttaccactacccgtgt
gccagcgatgcgggttgcttattcatggaagagaatttttctttgaaatgtcccaaacat
aagacactgccgttgtaa
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