Ochotona curzoniae (black-lipped pika): 121152618
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Entry
121152618 CDS
T11174
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04360
Axon guidance
ocz04724
Glutamatergic synapse
ocz04726
Serotonergic synapse
ocz04929
GnRH secretion
ocz04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
121152618 (TRPC1)
09154 Digestive system
04972 Pancreatic secretion
121152618 (TRPC1)
09156 Nervous system
04724 Glutamatergic synapse
121152618 (TRPC1)
04726 Serotonergic synapse
121152618 (TRPC1)
09158 Development and regeneration
04360 Axon guidance
121152618 (TRPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocz04040
]
121152618 (TRPC1)
Ion channels [BR:
ocz04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121152618 (TRPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
121152618
NCBI-ProteinID:
XP_040830676
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MMAALYPTTDLSGASSLPSSPSSSSPNEVMALKDVREVKEENTLNEKLFLLACDKGDYYM
VKKILEENSSGDLNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSADALLVAIDSEV
VGAVDILLNHRSKPSSRPTIVKLMERIQSPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
VSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSA
DLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSNDEPLDKRGLLE
ERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGIFWP
VLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPALER
IDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHD
FADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLG
MFLLVLFSFTIGLTQLYDKGYSPKEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYIFSLA
HVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKF
ARAKLWLSYFDDKCTLPPPFNIIPSPKTMCYMISSLSKWICSHTSKGKVKRQNSLKEWRN
LKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEIRDLLGFR
TSKYAMFYPRN
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggccctgtacccgaccacggacctctcgggcgcctcctccctgccttcctcc
ccatcctcttcgtcgcccaacgaggtgatggcgctgaaggatgtgcgggaggtgaaggag
gagaacaccctgaatgagaagcttttcttgctggcgtgcgacaagggtgactattatatg
gttaaaaagattttggaggaaaacagttcaggtgacttgaacataaattgcgtagatgtg
cttgggagaaatgctgtgaccataactattgaaaacgaaaacttggatatactacagctt
cttttggactacggttgtcagtccgcagatgcacttttggtggcaatcgactctgaagta
gtgggagctgttgatatactacttaatcatcgatcaaaaccatcatcaagaccaactata
gtaaaactaatggaacggattcagagtcctgagtattcaacaactatggatgttgcacct
gttattttagctgctcatcgtaacaactatgaaattcttacgatgctcttaaaacaggat
gtatctctacctaagccccatgcagttggctgcgaatgtacattgtgttctgcaaaaaac
aaaaaggatagcctccgacattccaggtttcgtcttgatatttatcgatgtttggccagc
ccagctctaataatgttaacagaggaggacccaattctgagagcatttgaactcagtgct
gatttgaaagaactaagcctggtggaggtggaattcaggaatgattatgaggaactagcc
cggcaatgtaaaatgtttgccaaagatttgcttgctcaagctcggaattcacgtgaattg
gaagttatcctaaaccacacatctaatgatgagcctcttgacaaacggggattactagaa
gaaagaatgaatttaagtcgcctaaagcttgctattaaatataaccaaaaggagtttgtc
tcccaatctaactgccagcagttcctgaatactgtttggtttggacagatgtcaggttac
cgacgtaagcccacctgtaagaagataatgactgttttaacggttggcatcttttggcca
gttttgtcactttgttatttgatagcccccaaatctcaatttggcagaatcattcacaca
ccatttatgaaatttattattcatggagcatcgtatttcacattcctgctgttactaaat
ctgtactctcttgtctacaacgaagataagaaaaacacaatggggcctgcccttgaaaga
atagactatcttcttatactgtggattattgggatgatttggtcagacattaaaagactc
tggtatgaggggttggaagactttctagaagagtcccgtaatcaactcagtttcgtcatg
aattccctttatttagcaacatttgccctcaaagtggttgctcacaacaagtttcatgat
tttgctgaccggaaggactgggatgcattccatcctacactggtggcggaagggcttttt
gcatttgcaaatgttctgagttatcttcgtctcttttttatgtacacgaccagctctatc
ttgggtccattacagatttcaatgggacagatgttgcaagattttggaaaatttctcggg
atgttccttcttgttttgttttctttcacaattggactgacccagctgtatgacaaaggc
tactctcccaaagagcagaaggactgtgtgggcatcttctgcgagcagcagagcaatgac
accttccactcgttcatcggcacctgctttgctttgttctggtatattttctccttagca
catgtggccatctttgtcacaaggtttagctatggagaggaattgcaatcctttgttggt
gctgtgattgtcggcacgtacaacgtcgtggtggtgattgttctgaccaagctgctggtg
gccatgcttcataaaagctttcagttgatagcaaatcatgaagacaaagaatggaagttt
gcacgagcaaagttatggcttagctactttgatgacaagtgtacattacccccacctttc
aacatcattccttccccaaagactatgtgctatatgattagcagcctgagtaaatggatt
tgctctcacacatcaaaaggcaaagtcaaaaggcaaaacagtttaaaggaatggagaaat
ttgaaacagaagagagacgaaaactaccagaaagtgatgtgctgcttggtacaccggtac
ttgacttccatgaggcagaagatgcaaagtaccgatcaggccacggtggaaaatctaaat
gaactgcgccaagacctctcgaaattccgtaacgaaataagggatttacttggctttcgg
acttctaaatatgctatgttttatccaagaaattaa
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