Ochotona curzoniae (black-lipped pika): 121152695
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Entry
121152695 CDS
T11174
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocz03036
]
121152695 (SMC4)
Chromosome and associated proteins [BR:
ocz03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
121152695 (SMC4)
Condensin II
121152695 (SMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_29
SHNi-TPR
ABC_tran
Motif
Other DBs
NCBI-GeneID:
121152695
NCBI-ProteinID:
XP_040830816
LinkDB
All DBs
Position
Unknown
AA seq
1292 aa
AA seq
DB search
MPRRGTQPSTARSRDGGPAALDGSDAEPESPAADAGEPAGKARWSAPAEPEAPGEEVDSR
SLAEILSSIPPPPPPAMASEAGAPRLMITHIVNQNFKSYAGEKVLGPFHKRFSCIIGPNG
SGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYE
VIPDSNFYVSRTAYRDNTSVYHISGKKKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIA
MMKPKGQTEHDEGMLEYLEDIIGCGRLNEPIKVLCRRVEILNEHRGEKLNRVKMVEKEKD
ALEGEKNTAIEFLKLENEIFKQKNHVCQYYIYDLQKRIAEMETQREKIHEDTKEINEKSN
VLSNEMKAKNKAVKDVEKKLNKIMKFIEENKEKFTQLDLEDVQVREKLKHATSKAKKLEK
QLHKDKDKVEEFKSIPAKSQNIITETTSRNKALEKEKEKEEEKLKEVMDSLKQETQGLQK
EKENREKELMGFSKSVNEARSKMDVAQSELDIYLSGHNTAVSQLSKAREALLAASETLKE
RTGAIRDLEAQLPQTERELQEKEKELEKLTQEEIHFKSVVHELFQKVEEAKSSLAMNRSR
GKVLDAIIQEKKSGRIPGIYGRLGDLGAIDEKYDVAISSCCHALDYIVVDSIDTAQECVT
FLKRHNIGVATFIGLDKMAVWAKKMHRIQTPENTPRLFDLVKVNDEEIRQAFYFALRDTL
VADNLDQATRVAYQKDRRWRVVTLQGQIIEQSGTMTGGGSKVMKGRMGSSVVVEISEEEV
NKMESQLQRDSKKAVEIQEQKAQLEETVVKLRHSKREMKNTLEKFTASIQPLSEQEEYLN
VQVKELEANVLATAPDKKKQKLLEENVSAFKREYDDVAQKAGTVEAEVKRLHNMIVEINN
HKLKAQQDKLDKINKQLDECASAITKAQVAIKTADRNLKKAQESVTQTEKEIKDTEKEVE
DLTAQLKSLEDKAAEVIKNTNAAEESLPEIQKEHRSLLQELKVIQENEHSLQKDALSIKL
KLEQIDGHISEHNSKIKYWQKEISKISLHPIEDNPVEEVSVLSPADLEAIKTPDSITNQI
ALLEAQCHEMKPNLGAIAEYKKKEELYLQRVAELDKITCERDNFRQAYEDLRKQRLNEFM
AGFYVITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEK
TLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMF
EISDRLIGIYKTYNITKSVAVNPKEIAAKGLC
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcagaggcacccagccctccaccgcccggagccgcgacggcgggccggccgcc
ctggacggcagcgacgcggagcccgagagcccggccgcggacgcaggtgagcccgcgggg
aaggcgcggtggtcggccccggccgagccggaggcgccgggcgaggaggtggacagcagg
agcctggccgagattctgagcagcattcctcctcccccgcccccggccatggccagcgag
gccggcgcgccgcggctcatgatcacgcacatcgtcaaccagaacttcaaatcctacgcc
ggggagaaagtgctgggacctttccacaagcgtttttcctgcattattgggccaaatggc
agtggcaaatccaacgttattgattctatgctttttgtgtttggttatcgagcacaaaaa
atcagatctaaaaaactctcggtacttatacataattctgatgaacacaaggatatacag
agttgtactgtagaagttcattttcaaaagataattgataaggaaggagacgattatgaa
gtgattcctgacagtaacttttatgtatccagaacggcctacagagacaatacttctgtg
tatcacatcagtgggaagaaaaagacatttaaggatgttggaaatcttcttcgaagccat
ggaattgacttggatcataataggtttttaatcttgcagggtgaagttgaacaaattgct
atgatgaagccaaaaggccagactgagcacgatgaggggatgctggagtatttagaagat
ataattggttgtggacgactaaatgaacctatcaaagttttgtgtcggagagtagaaatc
ctaaatgaacacagaggagagaagctgaacagagttaagatggtggaaaaggaaaaggat
gccttagaaggagaaaaaaacacagcaattgaatttcttaaattggaaaatgaaattttt
aaacaaaagaatcatgtttgtcaatattacatctatgatctgcagaaacgaattgctgaa
atggaaactcagagggaaaaaattcatgaagataccaaagaaattaatgagaaaagcaat
gttctatcaaatgaaatgaaagctaagaataaagccgtaaaagatgtagagaagaaactg
aataaaattatgaaatttattgaagaaaataaagaaaaatttacacagctagatttggaa
gatgttcaagttagggaaaaactaaaacatgctacaagtaaagccaagaaactggagaaa
cagctccacaaagacaaagacaaggtggaagaatttaaaagtatacctgccaagagtcag
aatatcataactgaaaccacaagtagaaacaaagcccttgaaaaggagaaagagaaggaa
gaggagaagctaaaggaagttatggacagcctgaagcaggaaacacaaggacttcagaaa
gaaaaagaaaaccgggagaaagaacttatgggtttcagcaaatcagtaaatgaagcccgg
tcgaagatggacgtggcccagtcagaactggatatctatctcagtggacacaacactgcc
gtgtctcagttgagcaaggccagggaggctctgcttgcggcttcagagactctcaaagag
aggacaggcgcgatcagagacttagaggcccaactgcctcagaccgagcgggagctgcag
gagaaagaaaaagaacttgaaaaactcacacaagaagaaatacacttcaaaagtgtggtt
catgagcttttccagaaagttgaagaagcaaaaagttcattagcaatgaatcgaagtagg
ggcaaagtgcttgatgcgataattcaagagaagaaatctggcaggattccaggaatatat
ggacgactgggggacttaggagccattgatgaaaaatacgatgttgctatttcatcctgt
tgtcatgcattagactacattgtcgttgattctattgacacagcccaggaatgtgtgacc
ttcctaaagagacacaacatcggagttgcaacctttataggcttggataagatggcagta
tgggcaaaaaaaatgcacagaatccaaactccagaaaatacacctcggctatttgatttg
gtcaaagtaaacgatgaggagattcgccaagctttttactttgccttacgcgataccttg
gtagcggacaacttggaccaagccacaagagtagcgtaccagaaagacagaaggtggcga
gtggtgactttacaggggcagatcatagaacagtcaggtaccatgactggtggcggaagc
aaagtcatgaaaggaagaatgggctcatcggttgttgtcgaaatctctgaggaagaggta
aataaaatggaatcacagttgcagagagactctaaaaaggcagtggaaatccaagaacaa
aaagcacaacttgaagagaccgtggttaagttacggcacagtaagcgagaaatgaaaaat
acactggagaagtttactgcgagcatccagcctttatcagaacaagaagaatatttgaat
gtccaagttaaggaacttgaagctaatgtacttgccacagccccggataagaaaaagcag
aaattactagaagaaaatgttagtgctttcaaaagagaatacgatgatgtggctcagaaa
gctggtactgtggaagctgaggttaaacgattgcacaatatgattgtagaaatcaataac
cacaagctcaaggcccaacaagacaaacttgataaaatcaataaacaattagatgaatgc
gcttctgctattacaaaagcccaagtggcgatcaagacagctgacagaaatcttaagaaa
gcacaggagtctgtcactcaaacagagaaggaaataaaagacactgagaaagaagtggaa
gacttaacagcacaactaaaaagtcttgaggataaagcagcagaggtcatcaaaaacaca
aatgctgcagaggagtccttgccggagatccagaaagaacaccgcagtttgcttcaagag
ctgaaagtgattcaagagaacgaacacagtctgcagaaggatgcacttagcatcaagctg
aaactcgagcagatagatggccacatttcggaacataattctaagataaagtattggcaa
aaagagatctcaaaaatatcactgcaccccattgaagataatcctgttgaagaggtttca
gtcttaagcccagcagatcttgaggcaatcaaaactccagactccataacaaatcagatt
gcacttttggaagctcagtgtcatgaaatgaaaccaaatcttggtgccattgcagagtat
aagaagaaggaagaattatatttgcaacgggtagcagaattggacaaaatcacttgtgaa
agagataactttagacaagcatatgaagatcttcggaaacaaagacttaatgaatttatg
gctggtttttacgtcataacaaataaattaaaagagaattaccagatgctgaccttgggc
ggagatgccgagttggagctggtggacagcctggatcctttctcggaaggaatcatgttc
agtgtccggccacctaagaagagctggaagaagatcttcaacctttcggggggagagaag
acgctcagctccttggccttggtgtttgctctccaccactacaagcccactcccctgtac
tttatggatgagattgacgcagccctggattttaaaaacgtgtccattgttgcattttat
atatacgaacaaaccaaaaatgcccagttcataattatctctcttcgtaacaacatgttt
gagatttcagatagacttattggaatttacaagacatacaacataacaaaaagcgtagct
gtcaatccaaaagagatcgcagctaaaggactgtgctga
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