Ochotona curzoniae (black-lipped pika): 121153614
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Entry
121153614 CDS
T11174
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
121153614 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocz03000
]
121153614 (CIC)
Transcription factors [BR:
ocz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121153614 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_Cic_C
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
121153614
NCBI-ProteinID:
XP_040832182
LinkDB
All DBs
Position
Unknown
AA seq
2536 aa
AA seq
DB search
MSSLGGPWVAPDHPSLLLHSAGGQKMKPMKKACSSLSGGLGSGSKSPPATRAKALRRRGV
GEGDKPEEEEDEAQQQQQPGPEEAEEGEEEESERGSPKAEGPPPELHPGDPASGPTEDPK
GDGEAGRWEPSLSRKTATFKSRAPKKKYVEEHGAGSGGVSGAPEEQVRTPEEAGALGVPP
RPPTSARSSSTDTASEHSADLEDEPAEACGPGPWPPSSTSGGYDLRQLRSQRVLARRSDG
LFLPAVVRQVRRSHDLGVQFPGDRALTFYEGVPGGGVDVVLDATPPPGALAVGTAVCTCV
EPGMAAYREGVVVEVTTKPAAYKVRLSPGPSSQPGLPGSLLQPPQPSHREPEEAIWVARS
SLRLLRPPWEPEALLRKPPSGPEEGQAEPGVPLPPCPAVLDPKQPEDAEVSKISFGSGLG
APCEEGEEKHPPALGTPALHPLPPPQLLSPPPKSPAFAGPGRPGEQPSPCHEGSQGGSRS
SSVASLEKGAAPATRARTPLTAAQQKYKKGDVVCTPNGIRKKFNGKQWRRLCSRDGCMKE
SQRRGYCSRHLSMRTKEMEGLADSGPGGAGRPAGVAAREGSTEFDWGDETSRDSEASSVA
ARGDSRPRLVAPADLSRFEFDECEAAVMLVSLGSSRSGTPSFSPVSTQSPFSPAPSPSPS
PLFGFRPANFSPINASPVIQRTAVRSRHLSASTPKAGVLTPPDLGPHPPPPTPRERHSSG
ILPTFQTNLTFTVPISPGRRKTELLPHPGALGAPGTGGGGAAPDFPKSDSLDSGVDSVSH
TPTPTTPAGFRAVSPAVPFSRSRQPSPLLLLPPPAGLTSDPGPSVRRVPAVQRDSPVIVR
NPDVPLPSKFPGEVDTAGEVRSGGPGRGCRETPVPPGVASGKSGLPPPLPAPVPITVPPA
APTAVAQPMPTFGLASSPFQPVAFHPSPAALLPVLVPSSYTSHPAPKKEVIMGRPGTVWT
NVEPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQQPASHPVASNQSKEPAESAAVAHEQP
PGGTGNADPGRPPGATCPESPGPGPPHTLGVVEPGKGPHPTTEEEASGPPGEPRLDSETE
SDHDDAFLSIMSPEIQLPLPPGKRRTQSLSALPKERDSSSEKDGRSPNKREKDHIRRPMN
AFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHP
DWKWCNKDRKKSSSEAKPTSLGLAGGHKETRERSMSETGTAAAPGVSSELLSVAAQTLLS
SDTKAPGNSSCGPDRLHTVGGPGSARPRAFSHSGVHGLDGGEDSQALQELTQMVSGPTSY
SGPKPSTQYGAPGSFTAPGEAGALAASGRPPLLPTRTSRSQRAASEDMTSDEERMVICEE
EGDDDVIADDGFSTTDIDLKCKERVTDSESGDSSGEDPDGNKSFGRKVFSPVIRSSFTHC
RPTLDPEPPGPPDPPTAFSKGYCPAPSSSSAASSTSSAASYSLGSGTFKAQEPGQGSAAG
PLRPPPPGTGGPSTPSKAARFLPADPAPFRRKRPESVGGLEPPGPSVIAAPPSGGGGILQ
TLALPPGKEEREGSGARVPSAPAPSLGYGAPAAPLSRPAATMVTNVVRPVSSTPVPIASK
PFPTSGRAETSPADTAGARTEMSTGSRVPGGSPLGVSLVYSDKKAAAATSPAPHLVAGPL
LGTVGKAPATVTNLLVGTPGYGAPAPPAVQFIAQGTPGGGTTAGSGAGAGSGPNGPVPLG
ILQPGALGKAGGITQVQYILPTLPQQLQVAPAPAPAPGTKAAAPSGPAPTTSIRFTLPPG
TSTNGKVLAATAPTPGIPILQSVPSAPPPKAQSVSPVQAPPPGGSAQLLPGKVLVPLAAP
SMSVRGGGAGQPLPLVSPPFSVPVQNGAQPPSKIIQLTPVSVSTPSGLGPPVSPAPLPGP
TSQPQKVLLPSSTRITYVQSAGSHALPLGTSPASSQAGAVTSYGPSSSVALGFTSLGPSG
PAFVQPLLSGQAPLLAPGQVGVSPVPSPQLPPACTAPGGPVITAFYPGSPVPTSSAPLAQ
PSQAPPSLVYTVATSTTPPAATILPKGPSAPATATPAPSSPFPSATAGSMTYSLVAPKAQ
RPSPKAPQKVKAAIASIPVGSFEAGASGRPGPAPRQPLEPGPPREPTTLESELEGQPTQP
APPPPPETWTPTARSSPPPPPPTEERPGTKGPETTASKFPSSSSDWRVPGPGLESRGEPP
TPPSPAPAAASGSSSEGSSGRVAGDTPERKEVASAGKKVKVRPPPLKKTFDSVDNRVLSE
VDFEERFNELPEFRPEEVLPSPTLQSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKR
KMRRRSSCSSEPNTPKSAKCEGDIFTFDRTGTETEDVLGELEYDKVPYSSLRRTLDQRRA
LVMQLFQDHGFFPSAQATAAFQARYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAE
APLPVPPPAGTAAAPAPTPSPAGGPDPTSPGSDSGTAQAAPQLPPPPEPGPGQPGWEGPP
QSSPPPSGPSTAAAGR
NT seq
7611 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtcttgggggaccctgggttgctcccgatcatccttctctactcctgcactct
gcaggtggacagaagatgaagccgatgaagaaggcatgcagcagcctttcggggggtctc
ggcagcggcagcaagtcgccaccagccaccagggccaaggccctgagacggcgaggggtc
ggggagggtgacaagcctgaggaggaagaggacgaagcccagcagcagcagcaaccaggg
ccagaagaggctgaggaaggcgaggaggaagaaagtgagcgaggaagccctaaggccgag
gggccgcccccagagctgcaccctggggacccagcctcaggtccgactgaggaccccaag
ggggatggggaagctggccgctgggagccctcactcagccgcaagacagccacattcaag
tctcgagcacccaagaagaagtatgtggaggagcatggggctggcagcggtggggtgtct
ggggctccggaagagcaggtacggacacctgaagaggccggggcactgggtgtgcctcca
cggccgcccacctcggcccgctcttcctccacggacacagccagtgagcactctgcggac
ctggaggatgagccggctgaggcttgcggtccaggcccctggcctcccagcagcacgagt
ggtggctatgatctgcggcagctgcggtcccaacgcgtgctggcccgacgcagcgatggc
ctcttcctgccagctgtggtgcgccaggtgcgccgaagccatgacctgggcgtgcagttc
cctggtgaccgggccctgactttctacgagggtgtgcccggtggaggggtagatgtagtt
ctggatgccacaccgccacctggtgcactggcagtgggcacagctgtctgcacgtgtgtg
gaacctgggatggctgcctaccgtgaaggtgtggtggtggaagtgaccaccaagccagct
gcctacaaggtccgcctcagccctgggcccagctcccagccaggcctgccgggctctctc
ctgcagcccccacagccatcacaccgagagccagaggaggccatatgggtggcccgctcc
agcctgcgtctcctgcggccaccctgggagccggaggctctgctgaggaagcctccttct
ggccccgaggaagggcaggctgagcccggggtccccctgccgccctgccctgctgtcctg
gaccccaagcagcccgaagatgctgaagtctctaagatcagctttggcagtggcctgggg
gctccctgcgaggaaggtgaggagaagcacccgccagccctgggcaccccggccctacat
ccactgcccccaccccagcttctgtcgccgccacccaagtctccagcctttgcaggccct
gggcgccctggcgagcagccctcgccatgccatgagggcagccagggtggcagccggagc
agcagcgtggcatccctggagaagggggctgcgccggccacccgggcccgcacaccgttg
acagctgcccagcagaagtacaagaaaggtgacgtggtgtgcacccccaatgggattcgg
aagaagttcaacggcaaacagtggcggcggctgtgctcacgagatggctgcatgaaggag
tcccagcggcggggttactgctcacgccacctgtccatgcgcaccaaggagatggaggga
ctggcggacagtggtccgggtggagctgggcggccggccggcgtggcagcccgggagggc
agcactgagttcgactggggtgatgagacatcacgtgacagcgaggccagcagcgtggca
gcccgtggagactcgcgtccacgcctggtggcccccgcggacctgtcacgcttcgagttt
gatgagtgcgaggcagcggtgatgctggtgtccttgggcagctctcgctcaggcacgccc
tccttttctcctgtttccacgcagtcgcccttctcgccagccccgtcaccctcgccctcg
cccctctttggcttccgccctgccaacttcagtcccatcaacgcctcgccagtgatccag
cgcaccgcagtccgcagtcgccacctgagtgccagcaccccaaaggcaggcgtgctgacg
ccccccgacttgggcccccacccgccaccacccaccccccgagaacgccattcctctggc
atccttcccaccttccagaccaacctgaccttcaccgtgcccatcagccctgggcggcgg
aagacggagttgctgccccatccaggggcgttgggagcccctggcacagggggtggaggt
gctgccccagatttccccaagagtgacagtttagactctggtgtggactcagtgtctcac
acccctacaccgactacaccggctggcttccgagctgtgtcccccgccgtgcccttctct
cgctcccgccaaccctcaccgttgctgctgctgcctccgcctgccggcctgacctcggac
ccagggccctccgtgcgcagggtgcccgccgtgcagcgggactccccagtcattgtccgc
aatcctgatgtgccactgccctccaagttcccaggggaggtggacactgccggtgaggtg
cggtctgggggacctgggcggggctgccgtgagaccccggtgccccccggggtggccagc
ggaaagtctggcctacccccacctctgccagcccccgtgcccatcactgtgcctccagct
gcgccgactgccgtggcccagccgatgcccacctttggcctggcttcttcgcccttccag
cccgtggccttccacccctctcctgccgctctgttgcccgttctggtgcccagcagttac
accagccatcctgctcccaagaaggaggtcatcatgggccgccctgggacagtgtggacg
aatgtggaacctcgctctgtggccgtgtttccctggcactccttagtacccttcctggca
cccagccagcctgacccctctgtgcagccgagtgaggcccagcaacctgccagccacccg
gtagcttccaaccagagcaaagaacctgctgagtcggcagctgttgctcacgagcagcca
ccaggcgggacgggaaatgctgaccctgggcggccccctggagccacgtgccctgagagt
ccagggcctggacccccgcacactttgggggtggtggaacccggcaagggtccccatccc
accactgaggaggaggcctctggcccccctggagagcctcggctggacagtgagacggaa
agcgaccatgatgatgccttcctctccatcatgtctcccgagatccagttgcctctgcca
cccggcaagcgccggacccagtcactcagcgctctgcccaaggagcgggactcatcctct
gagaaggatggacggagccccaataagcgagagaaggaccacatccggcggcccatgaac
gccttcatgatctttagcaaacggcaccgggccctggtccaccagcgccacccgaaccag
gacaaccggaccgtcagcaagatcctgggcgagtggtggtacgccctggggcccaaggag
aagcagaagtaccatgatctggccttccaggtgaaggaagcccacttcaaggcccaccca
gattggaagtggtgcaacaaggaccgaaagaaatccagctcggaggccaagcccacgagt
ctggggctggcaggagggcacaaggagacgcgggagcggagcatgtcggagacgggcact
gccgctgcccccggggtatcatctgaactgctgtctgtcgcagcccagacgctcctgagc
tcggacaccaaggctccaggcaacagctcgtgtgggccagatcggctgcacactgttggg
gggcctggctcggcccggccccgggccttctcccacagtggggttcatggcctggacggt
ggggaagacagccaggcgctgcaggaactgactcagatggtgtctggccctacatcatac
tctggcccaaagccttccactcagtatggcgctccgggctccttcacagcccctggggaa
gcaggggccttggcagccagtggacggcctccactactgcccacccgaacctctcgttcc
cagcgtgcggccagcgaggacatgaccagtgacgaggaacgcatggtcatctgtgaagag
gaaggggatgatgatgtcattgctgatgatggcttcagcaccactgacattgatctcaag
tgcaaggagcgggtgaccgacagtgagagtggagacagctctggggaagacccagatggc
aacaagagctttggtcggaaggtgttctcgcctgtgatccgctcctcctttacccactgc
cgccccacgctggaccctgagccccccggacccccagatccacccaccgccttcagcaaa
ggctactgtcctgccccatcttcttcctcggctgcctcatcaacctcatcagctgcatcc
tattctctgggctcaggaaccttcaaagcgcaggagccgggacagggcagcgcggcaggc
ccgctccggcctccaccccctgggactgggggcccatcgactccttccaaggctgcccga
ttcctcccagcggatcctgccccctttcggaggaagagacctgagagtgtagggggcctg
gagccaccaggtccctcagtcattgcagcgcctcccagtgggggagggggcatcctgcag
accctggccctgcccccgggcaaggaggagcgggaaggcagtggagcccgagtaccctca
gccccagccccctcgttaggttatggggccccagcagcccctctgtcccgtcctgctgcc
accatggtcactaatgtggtgcggccggtcagtagcactcctgtgcccatcgcttctaag
cccttccccacctctggccgggctgagacatctccagctgacacggcaggtgccaggact
gaaatgagcaccgggtccagggtgcctggaggctccccgctgggggtcagtttagtgtat
tcagacaaaaaggcagcggcagccacctcaccagccccacacttggtggctggaccccta
ctgggcactgtggggaaggcacctgccactgttaccaacctgttggtgggcaccccaggc
tatggggcccctgcacccccagctgtccagttcattgcccaggggacccctggtggtggg
accactgcaggctcaggagcaggtgctgggagtggccctaatgggccagttcccctgggc
atcctgcaaccaggtgctctgggaaaggctgggggcatcacccaggtgcagtacatcctg
cccacgctgccccagcagcttcaagtggcacctgccccagcaccagcccctgggactaag
gcagcggctcccagcggccctgcacccaccaccagcatccgtttcaccctcccgccgggc
acctccaccaacggcaaggtcctggctgccactgcacccactcctggcatccctatcctg
cagtctgtaccctccgccccaccccccaaagcccagtcagtttctcccgtgcaggccccg
cccccaggcggctcagcccagctgctccctgggaaggtcctagtgcccctggccgcccct
agcatgtcagtgcggggcggaggggctggccagccactgcccctggtgagcccacccttt
tcagtccctgtgcagaacggcgcccagccgcccagcaagatcatccagctaaccccagtg
tcagtgagcacgcccagcggcttggggccccccgtgagcccagctccacttcctgggccc
acctcgcagccccagaaggtcctgctgccttcttccacgagaatcacctatgtgcagtcg
gcgggtagccacgcgctgcccctgggcaccagtcctgcctctagccaagctggagcagtc
acctcgtacgggccctcaagctctgtggctctgggcttcacctcgctcgggcccagtggc
cctgccttcgtgcagcccttgctctcaggccaagccccactgctggctcctggccaggtg
ggcgtgtctcctgtgcccagcccccagctgcctcctgcctgcacagcccctggaggtcct
gtcatcacggcattttaccctggcagccctgtacccacctcctcagcacccctggcccag
ccatcccaggcacccccaagcctggtctacactgtggccaccagtaccaccccaccagct
gccaccattctgcccaagggcccatcagctcccgccactgccacccctgctccttcaagt
cctttccctagtgccacagcaggttccatgacatacagcctagtggcccccaaggcccag
cggcccagccccaaggctccccagaaagtgaaggccgccatcgctagcattcctgtgggc
tcctttgaggcaggtgcctccggacggcctggccctgcaccccgacaacctctggagcct
ggcccaccccgtgaaccgaccacactcgagtctgagctcgaggggcagcccacccaaccg
gcccctccaccacccccagagacctggactcccacagcccggagcagccccccgccaccc
ccgcccactgaggagcggcctggcaccaagggccctgagaccacggccagcaagttcccc
agttcgtcttcagactggcgcgtccctgggccgggcctggagagtcgtggggagcctcct
accccgcccagccccgcccctgccgcagcctcggggagcagcagtgaaggaagcagtggg
agggtagctggggacacccctgagcgaaaggaagtggccagtgctggcaagaaggtgaag
gtgcggcctccgccactcaagaagacctttgactccgtggacaacagggtcctgtcggag
gtggattttgaggagcgctttaatgagcttccagagtttcggcctgaagaggtgctgccc
tcgcccaccctgcagtccctggccacctctccccgggccatcctgggctcataccgcaag
aagaggaaaaactccactgatctggattcggcccctgaggatcccacctcgcccaagcgc
aagatgagaagacgctccagctgcagctcggagcccaacacccccaagagtgccaagtgt
gagggcgacatcttcaccttcgaccgcacaggcacagaaactgaagatgtgcttggggag
ctagagtacgacaaggtgccatactcgtcgctgcgccgcaccctggaccagcgccgggcc
ctggtcatgcagctcttccaggaccacggcttcttcccatcggcccaagccacggcagcc
ttccaggcccgctacgcagacatcttcccctccaaggtctgtctacagctgaagatccgt
gaggtgcgccagaagatcatgcaggcagccacgcccacagagcagcctcctggggctgag
gcccccctccctgtcccaccccctgctggcaccgctgctgcccctgccccaactcccagc
ccggctgggggtcctgaccccacctcacctggctcggactcgggcacagcccaagctgcc
ccgcaactgcctccacccccagagccagggcctggacagcctggctgggaggggccccca
cagtcctctccgcctccttcaggcccctccacagctgctgcaggcaggtga
DBGET
integrated database retrieval system
