Ochotona curzoniae (black-lipped pika): 121153657
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Entry
121153657 CDS
T11174
Name
(RefSeq) synphilin-1
KO
K04558
synphilin-1
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz05012
Parkinson disease
ocz05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
121153657
05022 Pathways of neurodegeneration - multiple diseases
121153657
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Paralog
GFIT
Motif
Pfam:
SNCAIP_SNCA_bd
Ank_2
Ank_4
Ank
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
121153657
NCBI-ProteinID:
XP_040832270
LinkDB
All DBs
Position
Unknown
AA seq
969 aa
AA seq
DB search
MEAPEYLDLDEIDFSDDISYSVTSLKTIPELCRRCDSQNEDRSVSSSGWNCGISTLITNT
QKPTGIADVYSKFRPVKRVSPLKHQPETLESNESDDQKNQKVDFQKGGDADTGPQPEELG
PEEGVGGPPGKGSEPPASLGELEHYDLDMDEILDVPYIKSSQQLASFTKATSEKRILGLC
TTLNGLATSKACSAGGAENPPSTMTPFCVLSPVKSPHLRKAPTIVHDQHKLGPEEPESMP
ALVQCGSTYEPENQSGDLVNKAFSELPSGRVEKALSDCQLRGFRLPCSAAETKLEEPVNG
VSWTSCQGPEERTEYQNKVRSILNIVREGQISLLPHLAADNLDKIHDENGNNLLHIAASQ
GHAECLQHLTSLMGEDGLNERNAGKLTPAGLAIKNGQLECVRWMVSETEAIAELSCSRDF
PSLIHYAGCYGQEKILLWLLQFMQEQGISLDEVDQDGNSAVHVASQHGFLGCIQTLVEYG
ANVTMQNHAGEKPSQSAERHGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQ
TQLQQLLEAQNSEGKSLPSSPSSPSSPASRNAQWKSPDAEEESAAKSKPGLQEGIPALGS
LSTCSRARARAKDEDPDKILRQLLGKEISENVCTQEKLSLEFQDAQASSRNPKKIPVEKR
ELKLARLRQLMQRSLSESDTDTTNAEDPKATPLRKPERPRPQPVVESVEGVDSAESLHLM
IKKHSVASTRRFPFGIKASKPLDGHSPSPTSESSEADVESQYVSPGNTAPGQGPGDSTQP
SPDSPAAQKVATSPKSALKSPSSKRRTSQNLKLRVTFEEPVVQMEQANTDPSGERDKDRC
RTAPRAPPGSESGDQLKRPFGTFRSIMETLSGNQNNNNNSQTASQLKTSTLPLTSLGRKM
TDAKGTLVSSAGKGKSKAGMFGSCISLSSSMLTEEPLRGCARHNDISRKMKKSYSIKHIA
EPESKELFL
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccctgaataccttgatttggatgaaattgacttcagtgatgacatatcttat
tcagtcacgtcactcaagaccataccggaactgtgccgaagatgtgactcgcaaaatgaa
gacagatcagtttctagctctggctggaattgtggcatctctactcttattacgaacaca
cagaagcccacagggattgccgacgtgtacagcaagttccgcccggtgaagcgcgtttcc
ccgctgaagcaccagccagagactctggagagcaatgagagcgatgaccagaagaaccag
aaggtagacttccagaaaggaggtgatgctgacacaggcccccagccggaggagcttggc
cctgaagagggagtgggcggaccgcccgggaagggctcagagccccccgcctcactgggc
gagctggagcattatgacctggacatggatgagatcctggatgtgccttacatcaagtcc
agccagcagcttgcctctttcaccaaggcaacctcggaaaaaagaattctgggtttgtgc
actaccctcaatggccttgccaccagtaaagcatgttctgctggaggtgctgagaacccg
ccatccaccatgacgcccttctgtgtcctgtctcccgtgaaaagtcctcacttgagaaaa
gcacccaccatagtccacgaccagcacaagctgggcccggaggaacccgagagcatgccc
gctctggtccagtgtggctccacatacgagcccgagaaccaaagcggagacttggtgaac
aaggccttctcagagctgcccagcggaagggtcgagaaggccctgtcagactgccagctg
cgaggcttccgcctgccctgctcagcagcagaaaccaagttggaagagccagttaatggt
gtgagctggaccagctgccagggacctgaggagaggacggagtaccagaacaaagtcagg
agcatcctgaacatcgtcagagaagggcagatctctctcctgccacaccttgcagcagac
aacctggacaagattcatgacgagaatgggaacaacctgctgcacatcgccgcctcacag
gggcatgctgagtgcctgcagcacctcacctccctgatgggggaagacggcctcaacgag
cgcaatgcaggcaagctgactcctgctggcctggccatcaagaatggccagctggagtgt
gtgcgctggatggtgagtgagacagaagccatcgcagaactgagctgctccagggacttc
cccagcctcatccattacgccggctgctacggccaggagaagattcttctgtggctgctt
cagttcatgcaagagcagggcatctcactggatgaggtggaccaggatggcaacagtgcc
gttcatgtggcctcacagcacggcttcctgggctgcatacagactctggtggaatacgga
gcaaacgtaaccatgcagaaccacgccggggagaagccatcccagagtgctgaacggcat
ggccacacactgtgctcccggtacctggtggtggtggagacctgcatgtccctggcctca
caggtggtgaagctgaccaagcagctcaaagaacagacggtggagcgtgtcaccctccag
actcagctgcagcagcttttggaagcccagaactcagagggcaagtctctcccttcctct
cccagttccccatcctcacctgcttctagaaatgcccagtggaagtctccagatgcagag
gaggagtctgcagccaaaagcaaaccagggctccaagaggggattccagcacttggcagc
ctgtccacctgcagccgggccagggccagagcaaaagatgaagatcctgacaaaatctta
cgtcagctactgggcaaagaaatctcggagaatgtctgcacccaggaaaagctgtccctg
gaattccaggatgcccaggcttcctctagaaacccaaagaagatcccagtggaaaagaga
gagctgaagctggccaggctgaggcagctgatgcagaggtcactaagcgagtccgacaca
gacaccaccaacgccgaggaccccaaggccacccctctgaggaagcctgagagacccagg
ccgcagcccgtggttgagagtgtggagggtgtggacagtgccgagagcctgcacctgatg
ataaagaagcacagcgtggcgtccacacgcaggtttccttttggtatcaaggcctctaaa
cctctggatggccatagcccgtctcccacatcagagagcagcgaagcagatgtggaatcc
cagtacgtgagccctgggaacactgccccaggccagggccctggagactccactcagccc
agccccgacagccctgcagcccagaaggtggccaccagtcccaagagtgccctcaagtcc
ccctcgtccaaacgccggacatcccagaacttgaaactcagagttacttttgaggagcct
gtggtacagatggagcaagcaaacaccgatccaagtggggagagagacaaggaccggtgc
aggaccgccccccgggcccccccaggcagcgagtcaggggatcagctgaaaaggcctttt
gggaccttccggtccatcatggagacactaagtggtaaccagaacaacaacaataactca
cagacagccagtcagctgaagacctcgaccttgcccttaacctcactcggaaggaagatg
acagatgccaagggaaccctcgtgagctctgctggcaaaggaaaaagcaaggcagggatg
tttggcagctgcatcagtctgtcctctagcatgctgactgaagagcctctgcgtggctgt
gcacggcataatgacatcagtagaaaaatgaagaaatcctacagcataaagcacattgct
gagccagagtcaaaagaactcttcttgtaa
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