Ochotona curzoniae (black-lipped pika): 121154175
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Entry
121154175 CDS
T11174
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04140
Autophagy - animal
ocz04148
Efferocytosis
ocz05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121154175 (VPS11)
04148 Efferocytosis
121154175 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121154175 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocz04131
]
121154175 (VPS11)
Membrane trafficking [BR:
ocz04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
121154175 (VPS11)
Hops complex
121154175 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
TPR_Vps41
zf-C3HC4
zf-rbx1
TPR_GEMI5
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
DUF1993
zf-RING_11
zf-HC5HC2H
zf-ANAPC11
zf-C3HC4_3
zf-RING-like
zf_RING_Vps8_fungal
DLP_helical
DUF5847
Motif
Other DBs
NCBI-GeneID:
121154175
NCBI-ProteinID:
XP_040833028
LinkDB
All DBs
Position
Unknown
AA seq
945 aa
AA seq
DB search
MAAYLQWRRFVFFDKELVKEPLGNDGAAPATVPAAGSAASKFLCLPPGITVCDSGRGSLV
FGDMEGQIWFLPRSLQLTGFQAYKLRVTHLYQLKQHNILASVGEDEEGINPLVKIWNLEK
RDGGNPLCTRIFPAIPGTEPTVVSCLTVHENLNFMAIGFTDGSVTLNKGDITRDRHSKTQ
VLHKGNYPVTGLAFRQAGKTTHLFVVTTENVQSYIVSGKDYPRVELDTHGCGLRCSALSD
PSQDLQFIVAGDECVYLYQPDERGPCFAFEGHKLIAHWFRGYLVIVSRDRKVSPKSEFTG
QDSQSSDKQILNIYDLCNKFIAYSAVFEDVVDVLAEWGSLYVLTRDGRVHALQEKDTQTK
LEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYIRSVCRTIG
KLEPSYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKT
KSESEVHFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEALQYIGKL
PFEQAESNMKRYGKILMHHIPEQTTQLLKGLCTDYRPSTEGRGDREAPGCRANSEEFIPI
FANNPRELKAFLEHMSEVQPDSPQGVYDTLLELRLQNWAHEKEPQVKEKLHAEAISLLKS
GRFCDVFDKALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVIAVCERHGEQD
PSLWEQALSYFARKEEDCKEYVAAVLKHIETRNLMPPLLVVQTLAHNSTATLSVIRDYLV
QKLQKQSQQIAQDELRVRRYREETTRIRQEIQELKASPKIFQKTKCSICNSALELPSVHF
LCGHSFHQHCFESYSESDADCPTCLPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDSFS
VIADYFGRGVFNKLTLLTDPPSARLAPGLEAGLQRDLLVHSRRGT
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctacctgcagtggcggcgtttcgtgttcttcgacaaggaactggtgaaggag
cctctgggcaatgatggggcagctcccgcgaccgtgcctgccgctggatccgctgcttcc
aagttcctttgcctccctcctggcatcactgtttgcgactcaggccgcgggagcctggtg
tttggagatatggaaggccagatctggttcttgccacgctccctacagctcacaggcttc
caggcctacaaactacgggtgactcacctgtaccagctgaagcagcacaacatcctggca
tctgtcggtgaggatgaagagggcatcaaccctctggtaaagatctggaacctggagaag
agagatggtggcaatccactctgtactcgcatcttccctgccatccctggaacagagcca
actgtcgtgtcttgtttgactgtccatgaaaacctcaacttcatggccatcggtttcaca
gatggcagcgttaccctgaacaagggagacatcacccgggaccgacacagcaagacccag
gttttacacaagggcaactatcctgtcactggcctggcctttcgccaagcaggaaaaact
acccacttgtttgttgtgacaacagagaatgtccagtcttacatcgtgtctggaaaggac
tatcctcgtgtggagttggacacccatggctgtggcctgcgctgctcagccctcagcgac
ccctctcaggacctacagttcatcgtggctggagacgagtgtgtctacctgtaccagcct
gacgagcgtgggccctgcttcgcctttgagggccataagctcattgcccattggtttcgg
ggctaccttgtcattgtctctcgtgaccggaaggtttcccccaagtcagagtttaccggc
caggactcacagagctccgacaagcagattctcaacatctatgacctgtgcaacaagttc
atagcctatagcgctgtctttgaggatgtagtggatgtgcttgctgagtggggttccctg
tacgtgctgacgagggacgggcgggtccacgcactgcaggagaaggacacccagaccaaa
ctggagatgctgtttaagaagaacttatttgaaatggcaattaacctggccaagagccag
catttggacagtgatgggctggcccagatcttcatgcagtatggagaccacctctacagc
aagggcaaccacgatggggctgtccagcagtacattcggtcagtctgcagaaccattggg
aagttagaaccatcctatgtgatccgcaaatttctggatgctcagcgtatccacaacctg
accgcctacctgcagaccctgcaccgacagtctctggccaatgccgaccatacgaccctg
ctgctcaactgctacaccaagctcaaagatagctccaaactggaagagttcatcaagacg
aagagcgagagtgaagtccactttgacgtggagacagccatcaaggtcctccgacaggct
ggctactactcccacgccctctacctggcggagaaccatgcccatcatgagtggtacttg
aagatccagctcgaggacattaagaattaccaggaggcgcttcagtatatcggcaagctg
ccgttcgaacaggcagaaagcaacatgaagcgctatggcaagatcctcatgcaccacatc
ccggagcagacgacccaactgctgaagggactctgtactgactataggcccagcacagaa
ggccgaggtgacagggaggctccaggctgcagggccaactcggaagagttcatccccatc
tttgccaacaacccgcgagagctcaaagccttcttggagcacatgagtgaggtgcagccg
gactccccccagggtgtctatgacacactccttgagctgcgcctacagaactgggcccat
gagaaggagccccaggtcaaagagaagcttcatgcagaagccatctccctgctgaagagt
ggccgcttctgtgatgtgtttgacaaggccttggtcctgtgccagatgcatgacttccag
gatggcgtcctttacctctatgagcagggcaagctgttccagcagataatgcactaccac
atgcagcatgagcagtaccggcaggtgatcgctgtgtgtgagcgccacggcgagcaggac
ccctccctctgggaacaggccctcagctacttcgcccgcaaggaggaggactgcaaggag
tatgtggcggctgtgcttaagcacatcgagaccaggaacctcatgccgcccctcctagtg
gtgcagaccctggcccacaactccacagctactctgtcagtcatcagggactacctggtg
cagaaactgcagaagcagagccagcagatcgcccaggatgaactgcgggtgcggcggtac
cgagaggagactacacgcatccgccaggagatccaggaactcaaggcgagtccaaagatt
ttccagaagaccaaatgcagcatctgcaacagtgccttggagttgccctccgtccacttc
ctgtgcggccactccttccaccagcattgcttcgagagttattctgaaagtgatgctgac
tgccccacctgcctcccagagaaccggaaggtcatggatatgatccgggcccaggaacag
aaacgagacctccacgatcagttccagcaccagctcaagtgctccaatgacagcttctcc
gtcattgctgactactttggcagaggtgtgttcaacaaactgactctgctgaccgaccct
ccctcagccagactcgcccccggcctggaggcagggctgcagcgggacctgcttgtgcac
tcccggaggggcacttaa
DBGET
integrated database retrieval system
