Ochotona curzoniae (black-lipped pika): 121154400
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Entry
121154400 CDS
T11174
Symbol
RNF180
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocz04121
]
121154400 (RNF180)
Enzymes [BR:
ocz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121154400 (RNF180)
Ubiquitin system [BR:
ocz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121154400 (RNF180)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
121154400
NCBI-ProteinID:
XP_040833273
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
GPGTAHARPGWEPAEVEGARPATAATHRGRPRLRGRWRCSSAFRGVWLLSLPVSPNRHRS
RCRRRCCCCFCCCCRRRSLGAFPEPGYRRPGAPGRGRGRRTNCRDSVDDRSICRLWHVNI
EALPERINCLIQKAQWTVGKLNCPLCGARVGGFNFVSTPKCCCGQPAAVHPCKSRTDRPP
AQAGHLMSPSPKHLSRPRVQAGWDDDARLTGGGSQSRNLRLFDMAQHRDSPGRLTDALCL
EVRSTDFEIKNEQALLRTSDPKYQLFIPRLVTGRCTARAFHRKSQSLDLNISGKLTLLPT
LYELHSKPTACPRLDATQPVGLSRLSLQSAKNSCSFPNPSRFDPNMLLPGFSVAPHETQT
QRGGEFQCGLEASSVYSDNATSSNLTFLVDLPSAGRSRLEGSDQEEQLSPLDFLRSASLS
LGTINQRLNKRERSKLRNLRRKQRRHERWLQKQGKCPGVGLLNHMSLSNDMSTDEDNDCA
EEKDSYVCAVCLDVYFNPYMCYPCRHIFCEPCLRTLAKDNPASTPCPLCRTIISRVFFQT
ELNNATKTFFTKEYLKIKQSFQKSSSAKWPLPSCRKAFHLFGGFHRRPAPVTRRQFPHGA
HRMDYLHFEDDSRGWWFDMDMAIIYIYSVNWVIGFVVFCFLCYFFFPF
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
gggccgggcaccgcccacgcgcgcccggggtgggagccggctgaggtggagggagcgcgg
ccggcgacggcggcgacccaccgtgggcgtcccaggctgcggggccgctggcgctgctcg
agcgctttccgcggggtttggctcctgtcgcttcccgtctcgccgaaccggcatcgcagc
cgctgccgccgccgctgctgctgctgcttctgctgctgctgccgccgccggagcctcggc
gcgttcccggagccaggctaccggcggccgggcgcgccggggaggggacgcggacgcaga
acaaattgtcgcgattcggtcgatgatcggagtatttgtcgtttgtggcacgtgaacata
gaagcacttccggagcggataaactgcctgatacaaaaagcccagtggacagttgggaaa
ctgaactgccctctctgtggggcccgcgtagggggctttaattttgtcagcactccaaaa
tgttgctgtggccagccggcagctgtacatccctgcaagagccgaaccgatcgtccccca
gcacaggcaggccatctcatgagcccttcgccgaaacacttgtcacgtcctagggttcag
gcaggttgggacgacgacgcccggctgacaggtggtggctctcaaagcagaaacctaagg
cttttcgacatggcccaacaccgtgacagccctgggaggctaacagacgcgctctgcctg
gaggtacgctccacggatttcgagataaagaacgaacaagcgctactcagaacctcagat
cccaaataccagctttttattccccgactcgtgactggcaggtgcacggcgagagctttt
catagaaaatcacagagtttggatctgaacatcagcgggaaactgactttgttacccact
ttgtatgaactgcatagtaagccgaccgcctgtcccaggctggatgccacgcagcccgtg
ggcctttcacgtttgtctttacaatcggctaaaaatagctgttcctttccgaacccatcc
cgttttgatcctaacatgctgctgccaggattttctgtggctccccacgagacccagaca
caaagaggaggcgagtttcagtgcggtctagaagcttcttccgtgtattctgacaacgct
accagcagcaacctgactttcctcgtggacctgccctcggctggtcgcagcagactggaa
ggctccgaccaggaagagcagctgtcccctctggatttcctgcgctcagccagcttgtca
ctgggcaccattaaccagaggctgaataagagagagcggagcaagctgaggaatctaagg
aggaaacaacgacggcatgaaagatggctgcagaagcagggtaaatgcccgggagtggga
ttgctaaatcacatgagtttgagtaatgacatgagtacagatgaagacaacgactgtgcg
gaagaaaaggacagctacgtctgcgccgtgtgtctggatgtctatttcaacccttacatg
tgttacccttgccgccacatcttctgtgagccctgcttacggactctggccaaagacaac
ccagcaagcaccccctgcccgctgtgtcggacaatcatatctagagtctttttccagaca
gaactgaacaatgccacaaaaacattttttactaaagaatatttgaaaataaaacaaagc
tttcaaaaatccagctctgccaaatggccccttccaagctgcaggaaagcatttcatctt
tttggaggcttccaccggcggccagcgccggtcaccaggcggcagttcccgcacggcgcc
cacaggatggactacctgcacttcgaggacgacagccgcggctggtggttcgacatggac
atggccatcatctacatctactccgtcaactgggtcatcggcttcgtggtcttctgcttc
ctttgctattttttctttccgttctag
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