Ochotona curzoniae (black-lipped pika): 121154664
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Entry
121154664 CDS
T11174
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocz03036
]
121154664 (DDX4)
Enzymes [BR:
ocz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121154664 (DDX4)
Chromosome and associated proteins [BR:
ocz03036
]
Eukaryotic type
Gene silencing
piRNA pathway
121154664 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
121154664
NCBI-ProteinID:
XP_040833631
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MGDEDWEAEIIKPHVSSYVPGVEKDRFSSGANGDPPSRTLPSSSDMDDGSSRRDHFMRSG
FGSGRSLGNRDAGESTRKENMSAGGGFGVVKGFGSRGFSHNKFEEGDSSGFWRESNNDCE
DYQTRKRGFSKRGGYQDGNGSEASGPPRRGGRGSFRGCRAGFGLGSPNNENNEDEGMQRS
AGFYGSRRSALSTTGNGDTFQSRSGSGSGRGGYKGLNEEIITGSGKNSWKSEAEGEESGD
TQGPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVSGQDPPPAILTFEEANLCQT
LNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHLMRERVTSS
RFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVVYGGTQLGHSIRQIVQGVNI
LCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTL
MFSATFPEEIQRLAGEFLKSSYLFVAVGQVGGACRDVQQTVLQVGQYAKREKLVEILRNI
GDERTMVFVETKKKADFIATFLCQEKIATTSIHGDREQREREQALGDFRCGKCPVLVATS
VAARGLDIENVQHVINFDLPSAIDEYVHRIGRTGRCGNTGRAISFFDPESDNHLAQPLVK
VLTDAQQDVPAWLEEIAFSSYTPGFSGSTRGNMFASVDTRKNFQGKSTLNTAGFSSSQTP
NPVDDESWD
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgaggattgggaagcagaaatcatcaaacctcacgtgtcttcctatgtccct
ggggtggagaaggatagattctcttctggagcaaatggagaccctcccagcaggaccctg
ccttcgtcatcagatatggacgatggatcttctagaagagatcatttcatgaggagtgga
tttggctctgggagaagtttgggaaacagagatgctggcgaatctactagaaaagagaat
atgtccgcgggaggtggttttggagttgtgaagggctttggaagtagaggtttttcacat
aacaagtttgaagaaggtgatagctctggtttctggagagaatctaataatgactgtgaa
gattatcaaacacggaaaagaggattttccaagagaggtggctatcaagatggaaatggc
tcagaagcttcaggtccccccagaagaggtggaagaggtagtttccgaggttgccgtgct
ggatttggtctaggaagtccaaataatgaaaacaatgaagatgaagggatgcagcgctct
gctggcttttacggttctagaagatcagccttaagtaccacaggtaatggtgacacgttt
caaagcagaagtggcagtggaagtggacgaggtggttacaaaggtttaaatgaagaaata
ataacaggttctggaaagaattcttggaagtcagaagctgaaggagaagaaagtggtgat
actcaaggaccaaaagtgacctacataccccctcctccacctgaggatgaggattccatc
tttgcacattatcagacaggcataaactttgacaagtatgatactattcttgtggaggtt
tctggacaagacccaccgccagcaattctgacttttgaagaagccaatctttgtcagaca
ttgaataacaacattgctaaagctggctatacaaagcttactcctgtgcagaaatacagc
attcctattatacttgctggaagagatttgatggcttgtgctcaaacaggatctgggaaa
accgcagcttttctcttgccaatattggctcatctgatgcgtgagagagtaacttccagt
cgttttaaagagctacaggagccagagtgtatcatcgtagcaccaactcgagaactcatc
aaccagatttatttggaagccagaaaattttcttttgggacttgtgtaagagctgttgtt
gtctatgggggaacccagttggggcattcaattcggcagatagtacaaggtgttaatata
ttgtgtgctactcctggaagactgatggatatcataggtaaagaaaagattggtctcaaa
caagtcaagtatttagttttggatgaagcagatcgcatgttggatatgggttttggacca
gaaatgaagaagttaatttcttgcccaggaatgccgtcaaaggaacaacgtcaaaccctt
atgttcagtgcaacatttccagaagaaattcaaaggttggctggggagtttttaaaatca
agttatttgtttgttgctgttggacaagtgggtggagcatgtagagatgttcagcagacc
gttcttcaggttggccagtatgcaaaacgagaaaagcttgttgaaattctgcgaaacata
ggtgatgaaagaacaatggtttttgtggaaactaagaaaaaagcagattttattgcaact
tttctttgtcaagaaaagatagcaactacaagcattcatggtgatcgagaacagagggaa
agagagcaagctcttggagattttcgttgtggaaaatgtccagttcttgttgctacttca
gtagctgcccgagggctggatattgaaaatgttcaacacgttatcaattttgatcttcct
tctgctattgatgagtatgttcatcgaattgggcgcactggtcgttgtgggaatactggc
agagctatttccttctttgatcctgagtcagataaccatttagcacagcctcttgtgaaa
gtactgacagatgctcaacaggatgttcctgcatggttggaagaaattgcctttagttca
tacactcctggctttagtggtagtacaagaggaaacatgtttgcatcagtggatactaga
aagaatttccagggcaagagcacattgaacactgcaggattttcttcttcgcaaactccc
aatcctgtagatgatgagtcatgggattaa
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