Ochotona curzoniae (black-lipped pika): 121154943
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Entry
121154943 CDS
T11174
Symbol
TSEN34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34 isoform X1
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocz03016
]
121154943 (TSEN34)
Enzymes [BR:
ocz01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
121154943 (TSEN34)
Transfer RNA biogenesis [BR:
ocz03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
121154943 (TSEN34)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
DUF6559
SAGA-Tad1
Motif
Other DBs
NCBI-GeneID:
121154943
NCBI-ProteinID:
XP_040834036
LinkDB
All DBs
Position
Unknown
AA seq
307 aa
AA seq
DB search
MLVVEVANGRSLVWGAEAVQALRERLGVGGRTVGALPRGPRQNSRLGLPLLLMPEEARLL
AEIGAVTLVSAPRPDPRQHSLALASFKRQQEQSFQEQSALAVEAREAQRQELRDKIAQGQ
AAKKQRLEQAAGASGVQEAAGSQAGPEQAQEGQEAGEQQEAPPSQPGPSDEVAPLPRSAL
LVQLTTARPRPVKARPLDWRVQSKDWPHAGRPAHELRYSIYRDLWERGFFLSAAGKFGGD
FLVYPGDPLRFHAHYIAQCWAPEDPIPLQDLVAAGRLGTSVRKTLLLGSPQPDGTVVYTS
LQWAGLQ
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgctggtggtggaggtggccaatggccgctccctggtgtggggggccgaggcggtgcag
gcgctgcgggagcgcctgggagtcgggggccgcacggtgggcgccctgccccgcgggccc
cgccagaactcgcgcctgggcctcccgctgctgctgatgcccgaagaggcccggctgctg
gccgagatcggcgccgtgaccctggtcagcgccccgcgcccggatccccgccagcacagc
ctggctctggcatccttcaagcgccagcaggagcagagcttccaggagcaaagcgccctg
gcggtggaggcccgcgaggcccagcggcaggagctccgggacaagatcgcccagggccag
gccgccaagaagcagaggctggagcaggctgcgggggccagcggagtccaggaggccgcg
ggcagccaggctggtcccgagcaggcccaggagggtcaggaggccggggagcagcaggaa
gcacccccctcccagcccgggccttcggatgaggtggcccccttgcccaggtcagccctg
ctcgtgcagctgaccactgccaggccccggcccgtcaaggctcggccgctagactggcgt
gtgcagtccaaggactggccgcacgccggccggccggcccacgaactgcgctacagcatc
tacagggacctgtgggagcggggcttcttcctcagtgcggccggcaagttcggcggtgac
ttcctcgtctacccaggtgacccgctgcgtttccacgcccactacattgcccagtgctgg
gcccctgaggaccccatcccgctgcaggacctggtggctgccggccgcctggggaccagt
gtccgcaagaccctcctgctgggctccccgcagcctgatggcacggtggtctacacgtcc
ctgcagtgggcaggcctgcagtga
DBGET
integrated database retrieval system
