Ochotona curzoniae (black-lipped pika): 121155088
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Entry
121155088 CDS
T11174
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocz03000
]
121155088 (NPAS1)
Transcription factors [BR:
ocz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
121155088 (NPAS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_4
HLH
PAS_9
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
121155088
NCBI-ProteinID:
XP_040834197
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MSTPYSSRGGGVEGRCGGGRGTSIPWDFLPGLMVKAPPGPCLQAQRKEKSRNAARSRRGK
ENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAVAPPGSLA
PGRRGPAALASEVFEQQLGGHILQSLDGFVFALNQDGKFLYISETVSIYLGLSQVELTGS
SVFDYIHPGDHSEVLEQLGLRAPTPGPPTPPSLSSSSSSSSSSADAAETEPSPTEAAPSS
RAQERSFFVRMKSTLTKRGLHVKASGYKVIHVTGRLRARALGLVALGHTLPPAPLSELPL
HGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDVTRIRQSHLELLDK
GQVVTGYYRWLQRAGGFVWLQSVATVAGSGKSPGEHHVLWVSHVLSQAEGDQAPLDAFQL
PATHEDVSSPGPEPTGSAPQVEGKQPAPPDKEEASQSQSKCIKMEESPKEVTTGSEDSGD
EEAAGSPALLPRPEFTSVIRAGALKQVPMRPWGLAPPGDPAPALLHAGFLPPPVMRSLCA
PGAIRYGPAELGLVYPHLQRLGPGPGLPEAFYPTLGLPYPGPAAARLQRKGD
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccccctattccagccgtggcggcggggtcgagggcagatgcgggggaggccgt
ggcaccagcatcccgtgggactttctgcctgggctgatggtcaaggccccgcccggaccc
tgcctgcaggcgcagcgcaaggaaaagtcgcgcaacgctgcgcgctccaggcgcggaaag
gaaaacctggagtttttcgagctggccaagttgctcccgttgcccggtgccatctccagc
cagctggacaaggcgtccatcgtgcgcctcagcgtcacctacctccgcctgcggcgcttt
gccgccctgggggcgccgccctgggggctgcgggccgtagcgccaccgggcagcctggcc
ccaggccgccggggccctgcggcgctggcctcggaagtcttcgagcagcagctgggagga
cacatcctgcagtccctggacggcttcgtgttcgccttgaaccaggatgggaaattcctg
tacatttcagaaacagtgtctatctacctgggcctgtcgcaggtggagctgaccggcagc
agcgtcttcgactacatccacccgggcgaccactcggaggtgctggagcagctggggctg
cgcgccccgacgcctgggcctcccactcccccctccctctcctcttcctcctcgtcttcc
tcctcgtcggcggatgcggccgagaccgagcccagccccacggaggcggccccctccagc
cgcgcgcaggagcgctccttcttcgtccgcatgaagtccactctcaccaagagggggctg
cacgtcaaagcctctgggtacaaggtcatccatgtgacggggcgcctccgggcacgcgcc
ctgggcctggtggccctcggccacacgttgccccccgcgccgctgtccgagctccccctg
catggacacatgatcgtcttccgcctcagcctgggcctcaccatccttgcctgtgagagc
agagtcagcgaccacatggatctggggccttcagagctggtgggccgtagctgctaccag
ttcgtgcacggccaggacgtgacgaggatccgccaaagccacctggagctgctggacaag
ggccaggtggtgaccggctactaccgctggctgcagcgagctgggggctttgtgtggctc
cagtcagtggccactgtggcagggagtggcaagagccccggggagcaccacgtgctatgg
gtcagccacgtgctcagccaagcggagggtgaccaagcccccctggacgccttccagctt
ccggccacccatgaggacgtgtccagcccagggccagagcccacagggtcggctccccaa
gtggaagggaagcagcctgcccccccagacaaagaggaggcctcccagtcccagagcaaa
tgcatcaagatggaggaaagccccaaggaggtgaccacggggtccgaggacagtggagat
gaggaggccgcgggcagccccgccctgctgccgcgccccgagttcacatccgtcatccgt
gcaggggccctgaagcaggtccccatgcggccctggggcttggctccaccaggggaccca
gcacctgccctcctgcacgcgggcttcctgccgccgcccgtgatgcggagtctgtgcgcg
cccggcgccatccgctacggccccgcagagctggggctcgtgtacccgcatctgcagcgg
ctgggcccgggccccgggctcccggaagccttctacccgaccctgggcctgccataccca
gggcccgcggctgccaggttgcagcggaagggggactga
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