Ochotona curzoniae (black-lipped pika): 121156042
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Entry
121156042 CDS
T11174
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03013
Nucleocytoplasmic transport
ocz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121156042 (SRRM1)
03015 mRNA surveillance pathway
121156042 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121156042 (SRRM1)
03041 Spliceosome [BR:
ocz03041
]
121156042 (SRRM1)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121156042 (SRRM1)
Spliceosome [BR:
ocz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
121156042 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
121156042
NCBI-ProteinID:
XP_040835501
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMGKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKEISREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSMKVKEPSVQEATS
TSDILKAPKPEPIPEPKEPSPEKNSKKEKEKTRARSRSRSKSRSRTRSRSPSHTRPRRRH
RSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSS
SSSRSRSPPKKPPKRTSSPPRKTRRLSPSTSPPRRRHRPSPPASPPPKTRHSPTPQQSSR
TRKSRVSVSPGRTSGKVTKHKGPEKRESPSPAPKPRKVELSESEEDKGGRMAAADSVQQR
RQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSP
RMQMGKRWQSPVTKSGRRRRSPSPPPTRRRRSPSPAPPPRRRRSPTPPPRRRTPTPPPRR
RSPSPRRYSPPIQRRYSPSPPPKRRTASPPPLPKRRVSPSPPPKPRSSPVTKRRSPSLSS
KPRKGSSPGRSAREARSPQPNKRHSPSPRPRAPQPSSSPPPARRAPSSSPQRRQSPSPST
RPIRRVSRTPEPKKTKKTASPSPQSVRRVSSSRSASGSPEPAAQKLPAPSSPVQSQSPST
NWSPAVPVKKAKSPTPSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAA
AAASSAVSPAATAAATSVQEEAEAAASEPRKETESEPEDNLDDLEKHLREKALRSMRKAQ
VSPQS
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcgggacaagcgcggaacaggataatcgattcagcaacaaa
cagaagaaactactgaagcagctgaagtttgcagaatgcctagagaaaaaggtggacatg
ggaaaagtaaatttggaggtcataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gactctaaaatgatgcaaatcaacttgactgggtttttgaatggaaaaaatgctagagag
tttatgggagaactgtggcccctgctgttaagtgcacaagaaaacatcgctgggatcccc
tctgctttcttagaactgaagaaggaagaaataaaacagagacagattgaacaagaaaaa
ttggcgtccatgaaaaaacaagatgaagacaaggataagagggataaggaagaaaaagaa
atcagcagagaaaaaagggagcggtctcgaagcccgagaagacgcaaatccagatctcct
tcccctagaagacggtcctcccctgtcaggagagagagaaagcgcagtcattctcggtct
ccccgccacagaaccaagagtcggagcccttctcctgctccagaaaagaaggagaaaact
ccagagctcccagaaccttccatgaaagtcaaagaaccctcagtccaagaagccacatct
actagtgacatactgaaagctcccaagcctgaacctattccagaacctaaagaaccttct
ccagaaaaaaattccaaaaaggaaaaagagaagaccagagcaagatctcgatcacgttcc
aagtcaaggtcacggacacggtctcgctctccttctcacactcgacctaggcggcgccat
agatcccgatcgaggtcctactcacccaggaggcggccaagccccaggaggcgaccatct
cctcgcagaagaactccccccagacgaatgccacctccaccgaggcaccggcggagtagg
tctccagtcagacgaaggcggcgttcgtcagcctccttgtcggggagcagttcatcatcc
tcttcatctcgttcccggtcacctcccaagaagccccctaagaggacatccagtccccct
cgaaaaactcgcaggttgtctccttcgacaagtccaccgaggcgaaggcacaggccgtcg
cctcctgcaagcccaccccccaaaactcgccattccccgacaccccagcagtcgagccgc
acaaggaagagccgtgtctctgtgtctccagggaggacttctgggaaagtgacaaaacat
aaaggtcctgagaaaagagagtctccttcaccagcaccaaaacctaggaaagttgaatta
tctgaatcggaagaagacaaaggtggcaggatggccgcagcagattctgtgcagcagagg
cgtcagtacagacggcagaaccagcagtcttcatctgactctggctcctcttcctcctca
gaagatgagcgccccaagagatctcatgtgaagaatggtgaggtaggcaggcggcggaga
cattcaccttctaggagtgcctctccctcgcctcgaaagcgccagaaagagacctcccct
cggatgcagatgggaaaacgatggcaatcgccagtgaccaaaagtggtagacggaggaga
agtccctccccaccacccaccagaaggcggcgctctccttctcctgctcctcctccccgt
cggcgcaggtctccgaccccaccaccacgacgaaggactccgactccgccccctcgccgg
cgctcgccttccccacggagatactcccctccaatccagaggagatactccccgtcccca
ccgcccaagagaaggacggcttctcctccacccctgccaaagcgcagggtgtcgccgtct
ccaccgcccaagccgagaagctccccagtaaccaagagacggtcaccttccttgtcatcc
aagcctaggaaaggctcttccccaggccgctctgcccgggaagcccgctcaccacagccg
aacaagcggcactcgccatcccctcggcctcgcgctcctcagccctcctccagccccccg
cctgcgcggagagcaccgtcatcttcaccccaaagaaggcagtctccgtctccaagtact
aggcccattaggagagtctcccggactccggaacctaaaaagacaaaaaagactgcctct
ccaagccctcagtctgtaaggagggtctcctcctcccgctctgcatctggatcccctgag
ccagcagctcaaaagctcccggccccatcgtcccctgtccagtctcagtcgccctccaca
aactggtcaccagcggtaccggtcaaaaaggctaagagcccgaccccgagcccatcgccg
gcaaggaattccgatcaagaaggaggtggaaagaaaaagaagaaaaagaaggacaagaaa
cacaaaaaggacaagaaacacaagaagcacaaaaaacacaagaaggagaaggctgcggcc
gcggctgcatcttctgctgtgagccctgccgccaccgccgcggccacgtcggtgcaggag
gaggcagaggcagcagcgtcggagcccaggaaggagacagagagtgaacctgaggataac
cttgatgacctggagaagcacctccgggagaaggccctgcggtccatgcgcaaggcgcag
gtgtccccacagtcttag
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integrated database retrieval system
