Ochotona curzoniae (black-lipped pika): 121156067
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Entry
121156067 CDS
T11174
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03082
ATP-dependent chromatin remodeling
ocz04714
Thermogenesis
ocz05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121156067 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
121156067 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
121156067 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocz03000
]
121156067 (ARID1A)
03021 Transcription machinery [BR:
ocz03021
]
121156067 (ARID1A)
03036 Chromosome and associated proteins [BR:
ocz03036
]
121156067 (ARID1A)
Transcription factors [BR:
ocz03000
]
Eukaryotic type
Helix-turn-helix
ARID
121156067 (ARID1A)
Transcription machinery [BR:
ocz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121156067 (ARID1A)
Chromosome and associated proteins [BR:
ocz03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121156067 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
121156067
NCBI-ProteinID:
XP_040835567
LinkDB
All DBs
Position
Unknown
AA seq
2292 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPSELKKAEQQQREEAGGEAAAAAAAAAAAAAAERGEMKAAA
GQESEGPAVGPPQPLGKELQDGAESNGGGGGGGGAGSSGGPGAEPDLKNSNGNAGPRPAL
NNNLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSQSAVAAAAAAVFHQQH
GGQQSPGLAALQSGGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALS
SPRGGTPGSGAAAAAVGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTA
TPTLNQLLTSPSSARGYQGYPGGDYGGGPQDGGAGKGPADIASQCWGAAAAAAAAAAASG
GAQQRSHHAPMSPGSSGGGGQPLGRTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGP
QQGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGSLSYAQQIPPYGQQGPSGYGQQGQTPYY
NQQSPHPQQQQPPYSQQPPSQTPHGQPTYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSP
TPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPASSTLSQQAAYPQSQSQQSQQTA
YSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPM
GTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRS
GPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSNPQPGSAL
SPRQPSGGQMHTGMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPNAGMAGS
INPMSAGGQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMN
RKTQETAVAMHAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGG
TMANNSAGMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLY
ELGGEPERKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKK
WRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQP
PSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMRSNSVGMQDAFPD
GSDPTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMPSGQGPN
GGMGDPYSRTAGPGLGNVAMGPRQHYPYSGPYDRVRTEPGIGPEGNMGTGAPQPNLMPST
PDSGMYSPSRYPPQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQQNYKRPID
GTYGPPAKRHEGEMYTVPYSTGQGQPQQQQQLPPAQSQSASQQQAAQPSPQQDMYNQFSN
AYPATATAATERRPAGAPQNQFPFQFGRDRVSAPPGSSAQQNMPPQMMGGPIQASAEVAQ
QGTMWQGRNDMTYNYANRQSTGSAPQGPTYHGVNRTDEMLHTDQRANHEGPWPSHGTRQP
PYGPSAPVPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKM
QKAGPPVPASHIAPTPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVM
MSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKE
YEVGDPGQRTLLDPGRFNKVSSPASAEGEEEEEEEFLGPKLEEDAKEEAENDEELAFLGK
DRSASENVEEKLTSKFDKLPVKVAQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTE
HIQTHFESKTELLPSRPHAPCPTTHRKHVTTTEGTPGTTEQEGPPPDGPPEKRITATMDD
MLSTRSSTLTEEGAKSAEAAKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDW
QDSLAKRCVCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEK
EEEQDQGVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAV
CPSAEAQDPFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVR
FLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQA
SLLHMQNPPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQ
VICDVLFLIGQS
NT seq
6879 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccc
tcggagctgaagaaagccgagcagcagcaacgggaggaggcggggggcgaggcggcggcg
gcggcggcagcagcagcagcagcagcagccgccgagcgcggggaaatgaaggcagccgcc
gggcaggaaagcgagggccccgccgtggggccgccgcagccgctgggaaaggagctgcag
gacggggccgagagcaatgggggtggcggcggcggcggcggagccggcagcagcggcggg
cccggcgcggagccggacctgaagaactcgaacgggaacgcgggccctaggcccgccctg
aacaataacctcacggagccgcccggcggcggcggtggcggcagcagcgacggggtgggg
gcgcctcctcactcagccgcggccgccctgccgcccccagcctacggctttgggcaaccc
tacggccggagccagtctgccgtcgccgccgccgcggccgccgtcttccaccaacaacat
ggcggacaacaaagccctggcctggcagcgctgcagagcggcggtggcggcgggggcctg
gagccctacgcggggccccagcagaactcgcacgaccacggcttccccaaccaccagtac
aactcctactaccccaaccgcagcgcctaccccccgcccccccaagcctacgcgctgagc
tccccgagaggtggcactccgggctccggcgcggcggcggcggccgtcggctccaagccg
cctccctcctccagcgcctccgcctcctcgtcgtcttcgtccttcgctcagcagcgcttc
ggggccatggggggaggcggcccctcagcggccggcgggggaaccccccagcctaccgcc
acccccaccctcaaccaactgctcacgtcgcccagctcggcccggggctaccagggctac
cctgggggcgactacggcggcgggccccaggacgggggcgccggcaagggcccggcggac
atagcctcgcagtgctggggggcagcggcggcggcagcggcggcggcggccgcctcggga
ggggcccaacaaaggagccaccacgcgcccatgagccccgggagcagcggcggcgggggg
cagccgctcggccggacccctcagccatccagtccaatggatcagatgggcaagatgaga
cctcagccatatggtgggactaacccatactcgcaacaacagggacctccgtcaggaccg
cagcaaggacatgggtacccagggcaaccatatgggtcccagactccacagcggtacccg
atgaccatgcagggccgagcgcagagtgccatgggcagcctctcttatgcacagcagatt
cctccttatggacagcaaggccccagtgggtatggtcagcagggccaaactccatattac
aaccagcaaagtcctcacccccagcagcagcaacctccctactcccagcaaccaccgtcc
cagacccctcatggccagcctacatatcaacagcagccacagtcgcaaccaccacagctc
cagtcctctcagcctccatactcccagcagccatctcagcctccacatcagcagtcccca
actccatacccctcccagcaatccacgacccagcagcacccccagagccagcccccctac
tcccagccacaggcacaatctccctaccaacagcagcaacctcagcagccagcatcctcg
acgctctcccagcaggctgcataccctcagtcccagtctcagcagtcccagcaaactgcc
tattcccagcagcgcttccctccaccacaggagctatctcaagattcatttgggtctcag
gcatcctcagccccctcaatgacctccagtaagggagggcaagaagatatgaacctgagc
cttcagtcaagaccctccagcttgcctgatctgtctggctcaatagatgatctcccaatg
gggacagaaggagctctgagtcctggagtgagcacatcagggatttccagcagccaagga
gagcagagtaatccagctcagtctcctttctctcctcatacctcccctcacctgcctggc
atccgaggcccctccccctcccctgttggctctcccgccagtgttgctcagtctcgctca
ggaccactttcgcctgctgcagtgccaggcaaccagatgccacctcggccccccagtggc
cagtcggacagcatcatgcatccttccatgaaccaatcaagcattgcccaagatcgaggt
tatatgcagaggaacccccagatgccccagtacagcaacccccagcctggctcggcctta
tctccacgtcagccttctggaggacagatgcacacaggcatggggtcctaccagcaaaac
tccatgggaagctatggcccccaggggggccagtatggcccacaaggaggctacccaaga
cagccaaattataatgccttgcccaatgccaactaccccaatgcaggcatggctggaagc
ataaatcccatgagtgctggaggtcagatgcatgggcagcctggcatcccaccttatggc
acactccctccagggagaatgagtcatgcctccatgggcaacaggccttatggccctaac
atggccaatatgccacctcaggttgggtcagggatgtgtcccccaccagggggcatgaac
cggaaaactcaagaaactgctgttgccatgcatgctgccaactctatccaaaacaggcca
ccaggctaccccaacatgaatcagggtggcatgatgggaactggacctccctatggacaa
ggaattaatagtatggctggcatgatcaaccctcagggacctccatatcccatgggtgga
accatggctaacaattcagcagggatggcagccagcccagagatgatgggccttggggat
gtcaaattaactcctgcgaccaaaatgaacaacaaggcagatgggacacccaagacagaa
tctaaatccaagaaatccagttcttctaccacaaccaatgaaaaaatcaccaagttgtat
gagctgggtggtgagcctgagaggaagatgtgggtagaccgctaccttgccttcacggag
gagaaggccatgggcatgaccaatctgcctgctgtgggtaggaaacctttggacctctat
cgcctctatgtgtctgtgaaggagattggtggattgactcaggtcaataagaacaaaaaa
tggcgggaacttgcaaccaacctcaatgtgggcacatcaagcagtgctgccagttccttg
aaaaaacagtatatccagtgtctctatgcctttgagtgcaagattgaacggggagaagac
cctcccccagacatcttcgcagctgctgattccaagaagtcccaacccaagatccagcct
ccctctcctgcgggatcagggtccatgcaggggccacagacgcctcagtccaccagcagt
tccatggcagaaggaggagacctgaagccgccaactccagcatccacaccacatagccag
atcccccctttgccaggcatgaggagcaactcagttgggatgcaagatgcctttcctgat
ggaagtgaccccacattccagaagcggaattccatgactccgaatcctgggtaccagccc
agtatgaatacctctgacatgatggggcgtatgtcctacgagccaaataaggatccttat
ggcagcatgaggaaagctccagggagtgatcccttcatgccctcagggcagggccccaac
ggtgggatgggagacccctatagccggaccgccggccctgggctgggaaatgtggccatg
ggaccacggcagcactatccctacagcggtccttacgacagagtaaggacggaacctgga
atagggcctgagggaaacatgggcactggggccccccagccgaatctcatgccttccacc
ccagactcggggatgtattctcctagccgctaccctccgcaacagcagcagcagcagcga
catgattcctatggcaatcagttctctacccaaggcaccccctccggcagccccttcccc
agccagcagaccacaatgtatcagcagcagcagcaacagaattataagcggccaatcgat
ggtacctacggccctcctgccaagcggcacgaaggggaaatgtacactgtgccgtacagt
actgggcaggggcagcctcagcagcagcagcagttgcccccagcccagtcccagtctgcc
agccagcaacaagctgcccagccttcccctcagcaagatatgtacaaccagttcagcaat
gcctatcctgccactgccaccgctgctactgaacgccgaccagcaggcgctccccagaac
cagtttccattccaatttggccgagaccgtgtctctgcaccccctggctccagtgcccag
cagaacatgccaccgcaaatgatgggtggccccatacaggcatcggctgaggttgctcag
caaggcaccatgtggcagggacgtaatgacatgacctacaattatgccaacaggcagagc
acgggctctgccccccagggtcctacgtatcatggtgtgaacagaacagatgaaatgctg
cacacggatcagagggccaaccacgaaggcccatggccttctcatggcacccgccagccc
ccatatggtccctctgcccccgtgcctcccatgaccaggcccccaccatctaactaccag
cccccaccaagcatgcagaatcacattcctcaggtatccagccccgctcccctgcctcgg
ccaatggagaaccgcacctctcctagcaagtctccattcctgcactctgggatgaaaatg
cagaaggcaggtccaccagtgcctgcctcgcacatagcgcctacccctgtgcagcccccc
atgattcggcgggatatcacgttcccacctggctctgttgaagccacacagcctgtgttg
aagcagagaaggcggctcacaatgaaagacattggaaccccagaggcctggcgggtaatg
atgtccctcaagtctgggctgctggcagaaagcacatgggcattagacaccattaatatc
ctgctgtatgacgacaacagcatcatgaccttcaatctcagtcagctcccagggttgtta
gagctccttgtggaatatttccgaagatgcctgatcgagatctttggcattttaaaggag
tatgaggtgggcgacccaggacagagaacactactagacccagggagatttaacaaggtg
tctagtccagcctctgcggagggggaagaggaggaggaagaagaatttctgggtcctaag
ttggaggaggacgcaaaggaggaagctgaaaatgatgaggagctggccttcctgggcaag
gacaggtcggcctccgagaatgtcgaggagaagctgacaagcaagttcgacaagctgcca
gtgaaggtcgcccaaaagaacgacccgtttgtcgtggactgctccgataagcttgggcgt
gtgcaggagtttgacagtggcctgctccactggcggattggtgggggggacaccactgag
catatccaaacccattttgagagcaagacagagctgttgccttcccggcctcacgcgccc
tgcccaaccacccatcggaaacatgtcacgacaacagagggtacaccagggacgacagaa
caggaggggcccccacctgatggccctcccgagaagcggatcacagctaccatggatgac
atgctgtctacacggtccagtacgttgaccgaggagggggctaagagtgcagaggccgcc
aaggaaagcagcaagtttccatttggcatcagcccagcacagagccaccggaacatcaag
atccttgaggatgaaccccacagtaaggacgagaccccactgtgtacccttctcgactgg
caggattcccttgccaagcgctgtgtctgtgtgtccaataccatccgaagcctgtcattt
gtgccaggcaacgactttgaaatgtctaaacacccagggttgctgctcatcctgggcaag
ttgatcctgctgcaccacaaacacccagaacggaagcaggcaccactaacttatgagaag
gaggaggaacaggaccaaggggtgagctgtaacaaggtagagtggtggtgggactgcttg
gagatgctccgagaaaacaccttggtcacactcgccaacatctcggggcagttggacctc
tctccctaccccgagagcatctgcctgcctgtcctggacggactcctgcactgggccgtt
tgcccttctgctgaagcccaggaccccttctccaccctgggccccaatgccgtcctctcc
ccccagagactggtcttggaaaccctcagcaaactcagcatccaggacaacaacgtggac
ctgatcctggccacaccccccttcagccgtctggagaagttgtatagcaccatggtgcgc
ttcctcagtgaccgaaagaacccggtttgccgggagatggccgtggtactgctggccaac
ctcgcgcagggggacagcctggccgcccgtgccatcgccgtgcagaagggcagcatcggc
aacctcctgggcttcctggaggacagcctggcagccacgcagttccaacagagccaggcc
agcctcctccacatgcagaacccgccctttgagccaactagcgtggacatgatgcggcgg
gctgcccgcgcgctgctcgccttggccaaggtggacgagaaccactcggagttcacgctg
tacgagtcacggctgttggacatctcggtatcaccgttgatgaactcattggtgtcacaa
gtcatttgtgatgtactgtttttgattggccagtcatga
DBGET
integrated database retrieval system
