KEGG   Ochotona curzoniae (black-lipped pika): 121156139
Entry
121156139         CDS       T11174                                 
Symbol
TCEA3
Name
(RefSeq) transcription elongation factor A protein 3
  KO
K03145  transcription elongation factor S-II
Organism
ocz  Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:ocz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ocz03021]
    121156139 (TCEA3)
Transcription machinery [BR:ocz03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     121156139 (TCEA3)
SSDB
Motif
Pfam: TFIIS_M Zn_ribbon_TFIIS Med26 DBD_Tnp_Mut HVO_0758 Snu56_snRNP Auxin_repressed
Other DBs
NCBI-GeneID: 121156139
NCBI-ProteinID: XP_040835682
LinkDB
Position
Unknown
AA seq 389 aa
MSSVLRPVQVARPRPCRLLPSRLGRCLNAPLGPAGRRRANMGQEEELLKIAKKLEKMVAR
KSTEGALDLLKKLSGYRMSVQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLD
SPGTPKGKKGEEGGKTRKEEKGPEGADWKPETGLSPSKKSQGKESKCRKDSADSRSSTSS
SPKRPSVDRSNSSKSKAETPKTPSSPGTPTFAPSVCLLAPCYLTGDSIRDKCVEMLSAAL
QAEDDYKGYGVNCDKMASEIEDHIYQELKGTDMKYRNRVRSRISNLKDPRNPSLRRNVLS
GAISAALIAKMTAEEMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCT
YNQVQTRSADEPMTTFVLCNECGYRWKFC
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgtcgagtgtgttgcggcccgtgcaggttgcgcgccctcggccttgtcgcctgctgccc
tcgaggctcggccgttgcctcaacgccccgcttggccccgccgggcgtcgtcgggccaac
atgggccaggaagaggagctgctgaagatcgccaaaaagctggagaagatggtggccaga
aagagcacggaaggagccctggaccttctgaagaagctgagtggctaccggatgtccgtg
caactactgcagaccaccaggatcggagtcgctgtgaatggggtccgaaagcactgctca
gacaaagaggtggtgtccctggccaaggttctcatcaagaactggaagcggctgctcgac
tctccaggaactcctaagggaaaaaaaggagaggaaggaggaaaaacaagaaaggaagaa
aaaggtcccgaaggtgcagactggaaaccagaaacaggcctctctccatcaaagaaaagt
caagggaaagagtccaaatgcaggaaagactctgcggactccaggtcttctacctcctca
tctccaaaaaggccctcagtggacagatcaaacagcagcaagtccaaagccgagaccccc
aagacgcccagcagccccggcactcccacgtttgctccctccgtctgcctcctggccccc
tgctatctcacgggcgattccatccgggacaagtgcgtggagatgctctctgcagccctg
caagcagaagatgattacaagggctatggagtcaactgtgacaagatggcctcggaaatc
gaagatcatatctaccaggagcttaagggcacagacatgaagtaccggaaccgcgtacgc
agccggatcagcaacctcaaggaccccaggaaccccagcctgaggcggaacgtgctcagt
ggggccatctctgctgcgctcattgccaaaatgacggcagaggaaatggccagtgacgag
ctgagggaattgaggaatgccatgacccaggaggcgatccgtgagcaccagatggccaag
acgggcggcaccactaccgacctcttccagtgcagcaaatgcaagaagaagaactgtacc
tataaccaggtgcagacccgaagcgctgatgagcccatgacaacctttgtcctgtgcaat
gagtgtggctatcgctggaagttttgctga

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