Ochotona curzoniae (black-lipped pika): 121156452
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Entry
121156452 CDS
T11174
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04136
Autophagy - other
ocz04140
Autophagy - animal
ocz04211
Longevity regulating pathway
ocz05010
Alzheimer disease
ocz05014
Amyotrophic lateral sclerosis
ocz05016
Huntington disease
ocz05017
Spinocerebellar ataxia
ocz05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121156452 (ATG13)
04136 Autophagy - other
121156452 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
121156452 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
121156452 (ATG13)
05014 Amyotrophic lateral sclerosis
121156452 (ATG13)
05016 Huntington disease
121156452 (ATG13)
05017 Spinocerebellar ataxia
121156452 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
121156452 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocz04131
]
121156452 (ATG13)
03029 Mitochondrial biogenesis [BR:
ocz03029
]
121156452 (ATG13)
Membrane trafficking [BR:
ocz04131
]
Autophagy
Autophagosome formation proteins
ULK complex
121156452 (ATG13)
Atg1 complex
121156452 (ATG13)
Mitochondrial biogenesis [BR:
ocz03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
121156452 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
121156452
NCBI-ProteinID:
XP_040836122
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
METDLNAQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRAAAEDPGV
AYPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPTPVVMDTLRVPMAELAFSHQLSSS
RLSYQPAALGVGSSDLAYPVVFAAGLNATHPHQLMVPGKEGGVPLAPSQPAHGAQADQER
LPTHTTSDGAHCAATPSSSEDAETVSNSSEGRASPRDVLETIFVRKVGAFVNKPINQVPL
TSLDIPFAMFAPKNLELEDTDPMVNPPDSPDPESPLQCSLHSDGSSGGSSGNAHDDFVMI
DFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVR
EFDAFVETLQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaatgcccaggacagaaaggacctggacaagtttattaaatttttc
gccctcaagactgttcaagtgattgtccaggctcgacttggtgaaaagatttgtactcgt
tcgtcttcatccccaacgggttcagactggtttaacttagcaatcaaagacatcccagag
gttacacatgaagccaagaaggccctggcaggacagctgcctgctgtcggcaggtccatg
tgcgtggagatctcactcaagacttctgagggagattctatggagctggaaatttggtgt
cttgaaatgaacgaaaagtgtgacaaagaaatcaaagtttcctacacggtgtacaacagg
ctgtccttgctgctgaagtctctccttgcaatcactagagtaacaccagcctaccgcctc
tccaggaaacagggccatgagtacgtcatactctacaggatatattttggggaagtgcag
ctgagtggactaggagaaggtttccagaccgttcgtgttgggacagtgggcacccccgtg
ggcaccatcactttgtcttgtgcttacagaattaacttggcattcatgtcaaccaggcaa
tttgagaggaccccacctattatggggattatcattgatcactttgtggaccgcccctac
cccagctcgtctcccatgcatccctgcaactacagagctgctgccgaggaccccggggtt
gcatacccttctgtggaagactctcaagaagtgtgtaccacgtcattctccacctcccct
ccatcccagtgcgtgtttactgtcacaaaagcacattttcagacccctactcctgtggtg
atggacaccctgagggtccccatggcagaactggccttttcccatcaactctcaagctct
cgcctttcctatcagcctgctgccctgggcgttggatcatctgacctggcttatccagta
gtgtttgctgctggcttaaatgcaacacaccctcaccagctcatggttcctgggaaagaa
ggtggagtgcccctggctcccagccagcctgcccacggtgcccaggctgaccaagagaga
ctgccgacccacaccacttctgatggggcacactgtgctgccacaccttccagcagtgag
gatgctgaaactgtgtccaacagcagtgagggccgggcctcccctcgggatgtcctggag
accatctttgttcggaaagtgggggcttttgtcaacaaacccatcaaccaggtgcccctg
acgagtttggacatcccctttgccatgtttgctcccaagaatttggagctggaggatact
gaccctatggtgaatccccctgactccccggatcccgagtctcctctccagtgcagcctg
cattctgatggttccagtgggggaagcagtggcaatgcccatgatgacttcgtcatgatt
gactttaaaccggcattttcaaaagatgacattcttcccatggacttggggaccttctac
cgggaattccagaaccctcctcagctgagcagcctctccatagacatcggagcccagtcc
atggcggaggacttggactccctgccggagaagctggccgtgcacgagaagaatgtccga
gagtttgatgcctttgtggaaaccctgcagtaa
DBGET
integrated database retrieval system
