Ochotona curzoniae (black-lipped pika): 121156474
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Entry
121156474 CDS
T11174
Symbol
NUP160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03013
Nucleocytoplasmic transport
ocz05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121156474 (NUP160)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
121156474 (NUP160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121156474 (NUP160)
03036 Chromosome and associated proteins [BR:
ocz03036
]
121156474 (NUP160)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121156474 (NUP160)
Chromosome and associated proteins [BR:
ocz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121156474 (NUP160)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Nup160_C
TPR_NUP160_120_M
Beta-prop_Nup120_160
NUP160_helical
HEAT_Nup120
TPR_NUP120_160
DUF3942
Motif
Other DBs
NCBI-GeneID:
121156474
NCBI-ProteinID:
XP_040836190
LinkDB
All DBs
Position
Unknown
AA seq
1402 aa
AA seq
DB search
MAAAGSLERSFLELSGAERERPRHFREFTIGCVGTATVAAGTAKYNESAGGFYYMESGKL
LSVTRNRFIHWKTSGDTLELVEESLDINLLNNAVRLKFQNCSVLPGGVYVSETQNHVIIL
ILTNQTVHRLLFPHPSRMYRSELVVESQMQSVFTDIGKVDFRDRSNHQLIPTVPGPAPNS
TASAAWLSSDGEALFALPSASGGLFVLKLPPYDMPGATSIVELKQSSVMQRLLIGWMPTA
IRGDQGASDRALSLAVHCVEHDAFIFALCQDHKLRMWSYKDQMCLMVADMLEYVPVNKDL
RLTAGTGHKLRLAYSPSMGLYLGTYLHAPKRGQFCVFQLVSTENNRYSLDHISSLFTSQE
TLVDFALTCTDIWALWHDAENQTIVKYINFEQNVAGQWNPVFIQSLPEEDLIIRDDQDPR
EVYLRSLFTPGRFINAALCKALQIFCKGTEKNMDFSWNELKKEVTLAVEAELHGSITEYE
LSREEFRNLQQEFWCKFYACCLQYQEALSHPLALHLNPHTNMVCLLKKGYLSFLMPSSLV
DHLYLLPEENLLTEDESSISEDVDVARDVICLIKCLRLIGESVNLDMSVMMEMSCYNLQS
PEKAAEQILEDLITIDVENVLEDIYSKLQEIRNPIQAIGVLIREMDYETDVEMEKGFDPA
QPLNVRMNLSQLYGSNTASYIMCRAVFKIASIRFLICRDLLILQQLLLRLGDSVVLGAGQ
LFQAQQDLLHRTAPLLLCYYLIKWNSQSLATDVPVDTLESNLQHLSVLELTDSGTLVANK
FVSSPQTVVELFFQEVARKHIISHLFSQPKAPLGQTGLNWPQMIAAITGYLLQLLWPSNP
GCLFLECLMGNCQYIQLQDYIQLLHPWCQVNVGSCRFMLGRCYLVTGEGQKALECFCQAA
SEVGKEEFLDRLIRSEDRETVSTPKLQYYDKVLRLLDVIGLPELVIQLATSAITEAGDDW
KSQATLRTCIFKHHLDLGHNSQAYEALTQIPDASRQLDCLRQLVVVLCERSQLQDLVEFP
YVNLHNEVVGIIESRARAVDLMTHNYYELLYAFHIYRHNYRKAGTVMFEYGMRLGREVRT
LRGLEKQGNCYLAAINCLRLIRPEYAWIVQPASGAVYDRPGTSPKRNHDGECTAAPANRQ
IEILELKDLEKECSLARIRLTLAQHDPSAVAIAGSSSAEEMVTLLVQAGLFDTAISLCQT
FKLPLTPVFEGLAFKCIKLQFGGEAAQAEAWAWLAANQLSSVITTKESSATDEAWQLLSN
YLEKYKVQNNLYHHCVINKLLSHGVPLPNWLINSYKKVDAAELLRLYLNYDLLEEAVDLV
SEYVDAVLGKGHQYFGIEFPLSATAPMVWLPYSSIDQLLQALGENSANSHNMALSQKILD
KLEDYQQKVDKATRDLLYRRNM
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgggctccctggaacggagcttcttggagctgagcggcgcagagcgggag
aggccgaggcactttcgggaattcacgatcggctgcgtggggacggcgactgtggccgct
ggaaccgccaagtacaatgagagcgccgggggtttctactacatggaaagcggcaaattg
ctgtcggtcaccaggaacaggttcattcattggaagacctctggagatacattggagctg
gtggaagaatcattggatataaacctgctgaataatgcagttcgcctgaaattccaaaat
tgcagcgtcttgcccggaggggtttatgtctctgagacacagaatcatgtgatcatcttg
atacttaccaatcagacagtgcacaggctgcttttcccacatccttcccggatgtatagg
agtgagttagtagttgaaagccaaatgcagtcggtgttcactgacattggaaaagttgac
ttcagggatcgcagcaaccatcagttgattccgacggtccctgggccagctcctaattct
acggcctctgcagcctggctcagcagcgatggagaggctctgtttgcactgccttctgct
tctgggggtctctttgttctgaaactgcctccttacgacatgccgggggcgacgtccatt
gtggaactgaagcagagttcagtaatgcagcggctactgataggctggatgccaacagct
atcaggggtgaccagggcgcttcggatcgagccctcagccttgctgttcattgtgtggag
catgacgcgttcatctttgctctatgtcaggatcataagctgcggatgtggtcttacaag
gatcagatgtgtctaatggtggcagacatgttggagtatgtgcctgtgaacaaagacctt
cgactcactgctgggaccggacataaactgcgacttgcctactccccttccatgggcctc
tacctggggacgtacctgcacgcgcccaaacggggacagttctgcgtcttccagttggtg
agcactgagaataaccgttacagcctggatcatatctcctcactcttcacttctcaggag
acgttggttgactttgccttaacttgcacggacatctgggctctgtggcatgatgctgag
aaccaaacaattgtgaaatacatcaactttgaacagaatgttgcaggtcagtggaatcct
gtgtttatccagtctctaccagaggaagatctcatcatcagagatgaccaagaccccaga
gaggtgtatctgcggagtctttttacaccagggcgtttcataaatgctgctttatgtaaa
gcattacagattttctgcaaaggaacggaaaaaaatatggatttctcctggaatgagcta
aagaaagaagttactctagctgttgaggctgagctccatggaagtataacagagtacgag
ctctcccgggaggagttccgaaatctgcagcaggaattctggtgcaagttctatgcctgt
tgtcttcagtatcaagaggccctctctcaccctctcgctctgcatctgaatccccacacg
aacatggtgtgcctgctgaaaaaggggtacctgtccttccttatgccctcatcgctcgtg
gatcatttgtacctgctgcctgaggagaacctgctgacagaggatgagtcaagcatatct
gaggatgtggatgttgctcgagacgttatctgtctcataaaatgccttcggctgataggt
gaatcggtcaatttggacatgtcggttatgatggaaatgagttgctacaatctacagtct
ccagaaaaggctgcagaacagattctggaagatttgatcactattgatgtggaaaatgtg
ttggaggatatttatagtaaactacaagagattcggaacccgatccaggccatcggcgtt
ctcatacgggaaatggattatgagacagatgtggaaatggaaaagggatttgatccagct
cagcctttgaatgttcgaatgaacctttcccagctctatgggagcaacacagcaagttac
atcatgtgcagagctgtgttcaaaatcgccagtattcgcttcctcatctgccgcgacctg
ttgatcctgcagcagctcctgctgaggctgggcgattcggtggttctgggagctggtcag
ctctttcaggctcagcaagacctgctgcatcggacagccccgctgctcttatgttattac
ctcattaagtggaatagtcagtccttggcaactgatgttccagttgacacactggaatca
aatcttcaacacttgtcagtgctggaactgactgactctggtactttagtggcaaataaa
tttgtgtctagccctcagacagttgtggagttattcttccaagaagttgcaagaaagcac
attatctctcatctcttctctcagccaaaggcacctctgggccaaaccggattgaactgg
cctcagatgatagctgccatcaccggttacttactgcagcttttatggccaagcaatccc
ggttgtctctttctagaatgcctgatgggaaactgtcagtatatacagttgcaggattat
attcaactgctgcatccctggtgtcaagtcaatgttggttcctgtcgatttatgctggga
cggtgttaccttgttacaggagaaggacagaaggcactggaatgtttctgtcaggccgca
tctgaagtaggcaaggaagaattcttggatcgcttgattcgctctgaggatagggagaca
gtgtccactcccaagctacagtattacgacaaggttttacgtctactagatgtcattggt
ttgcctgagctggttattcagttggccacatcagcaataactgaagcaggtgatgactgg
aaaagtcaagccaccttaaggacatgcattttcaagcatcatttggatttgggtcacaac
agccaagcatatgaggccttaacccagattcctgatgccagcaggcagttagattgtttg
cgacagctggtggtggttctttgtgagcgctcgcagctgcaggaccttgtggagtttccc
tatgtcaatctgcataacgaggtcgtgggaatcattgaatcccgcgcgagagcagtggac
ctcatgactcacaactactatgagcttctctacgcctttcacatctaccggcacaactac
cgcaaggctggtacggtgatgttcgaatacggaatgcgtcttggcagagaggttcgaact
cttcggggactcgagaagcaaggcaactgctacctggctgccattaattgtttacgactg
attcgtccagagtacgcatggattgtgcagccagcgtctggcgcagtgtatgatcgcccg
ggaacatctcccaagaggaatcatgatggagaatgcacggccgccccagcaaatcggcag
attgaaatccttgaactaaaagacctggagaaggagtgttctttggctcgcatccgcctg
actttggctcagcacgatccgtcagcagttgccatcgcaggaagttcatcagcagaggaa
atggtgacactcttggttcaggctggcctctttgacactgccatatcactgtgccagact
tttaagcttcccctaacaccagtctttgagggacttgctttcaaatgcatcaagttgcag
tttggaggagaagccgcacaagctgaagcctgggcttggctggcagccaatcagctgtcc
tctgtcatcaccactaaagagtccagtgctactgatgaagcctggcaactattatcaaat
tacctagaaaaatacaaagtccagaataatttgtatcaccactgtgtaatcaacaagctt
ttatctcacggagtgcctctgcctaattggctcataaatagttacaagaaagtggacgcc
gctgagctgcttcgtctgtatttaaactatgaccttttagaagaagcagtggacttagtc
tcagaatatgtggatgctgtcctgggcaaaggccatcagtactttggaattgagtttcca
ctctctgcaacagccccgatggtgtggctgccttactcctccattgaccagcttctccag
gctctgggcgagaacagtgccaacagtcacaacatggcgctgtcccagaaaatacttgac
aaattggaggactaccagcaaaaggttgacaaggcaacccgggatttattatatcgtcgg
aacatgtga
DBGET
integrated database retrieval system
