Ochotona curzoniae (black-lipped pika): 121156542
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Entry
121156542 CDS
T11174
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04360
Axon guidance
ocz04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121156542 (LRRC4C)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
121156542 (LRRC4C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocz04515
]
121156542 (LRRC4C)
Cell adhesion molecules [BR:
ocz04515
]
Immunoglobulin superfamily
NGL family
121156542 (LRRC4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_1
LRR_14
V-set
LRR_9
Ig_2
LRRNT
Ig_6
LRR_LRWD1
Sp38
Herpes_gE_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
121156542
NCBI-ProteinID:
XP_040836256
LinkDB
All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALLDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLREVPDGISTNTRLLNLHENQIQVIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
TGMYTCMVSNSVGNTTASATLNVTAASTTPFSYFSTVTVETMEPSQDEARTTDNNIGPTP
VIDWETTNVTTSLMPQSTRSTEKTYTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctacttgaccctctgcttgtggtgctgctggctcttcaacttctggtggtggccggt
ctcgtaagggctcaaacctgcccctcggtgtgctcctgcagcaaccagttcagcaaggtg
atttgtgtacggaaaaacctgcgtgaggttccggatggtatttccacaaacacgcgactg
ctgaacctacatgagaaccaaatccaggtcatcaaagtgaacagcttcaaacacttgagg
cacctagaaattctgcagttgagcagaaaccatattagaaccattgaaattggggccttt
aatggtctggcgaatcttaacactttggaactctttgacaatcgtcttactaccatccca
aatggagcttttgtatatttgtctaaactgaaggagctttggctgagaaacaaccccatt
gaaagcatcccttcttatgcttttaacagaataccttctttgcgccgactagacttaggg
gaattaaaaaggctttcatatatctcagaaggtgcctttgaaggtctgtccaacttgagg
tatttgaaccttgccatgtgcaaccttcgggaaatccctaacctcacaccgctcataaaa
ctagatgagctggatctttctgggaaccatttgtctgccatcaggcctggctctttccag
ggattaatgcaccttcaaaaactgtggatgatacagtcccagattcaagtgattgaacgg
aatgcctttgataatctgcagtcactagttgagatcaacctggcacacaacaatctaaca
ttactgcctcatgacctcttcacacctttgcatcacctagagcggatacacttacatcac
aacccttggaactgtaattgtgacatactgtggcttagctggtggataaaagacatggct
ccctccaacacagcttgttgtgcccggtgcaacacacctcccaatctgaaagggaggtat
attggggaactcgaccagaattactttacatgctatgctcctgtgattgtggagccccct
gcagacctcaacgtcactgaaggcatggcagctgagctgaagtgtcgggcttccacgtcc
ctgacatctgtatcttggattactccaaatggaacagtcatgacacatggggcatacaaa
gtgcggatagctgtgctcagtgatggtacgttaaattttacgaatgtaacagtgcaagat
acgggcatgtacacttgtatggtgagtaattctgttggaaatactactgcttcagccact
ctgaatgttactgcagcaagcactactcccttctcttacttttccaccgtcacggtagag
actatggagccttctcaggatgaggcaaggaccacagataacaacataggccccactcca
gtgattgattgggaaaccaccaatgttaccacttctctcatgccacagagcacaaggtca
acagaaaagacatacacaatcccagtgactgacataaacagtgggattccaggaatagat
gaagtcatgaagactaccaaaatcatcattgggtgtttcgtggccatcacactcatggct
gcagtgatgttggtcattttctacaagatgaggaagcagcaccatcggcaaaaccatcat
gcccccacgaggactgttgagatcatcaatgtggatgatgagattacaggggacacgccc
atggaaagccacctgcccatgcctgctattgagcatgagcacttaaatcactataactct
tacaaatctcccttcaatcacacaacaacagttaacacaataaattcaatacacagttca
gtgcatgaaccgttattgattcgaatgaactctaaagacaatgtacaagagactcaaatt
taa
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