Ochotona curzoniae (black-lipped pika): 121156604
Help
Entry
121156604 CDS
T11174
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03015
mRNA surveillance pathway
ocz05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121156604 (CPSF4)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
121156604 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocz03021
]
121156604 (CPSF4)
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121156604 (CPSF4)
Transcription machinery [BR:
ocz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121156604 (CPSF4)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
121156604 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
Torus
zf-CCCH_2
zf-CCCH_4
zf-C3H1
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
121156604
NCBI-ProteinID:
XP_040836303
LinkDB
All DBs
Position
Unknown
AA seq
275 aa
AA seq
DB search
MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPP
LPQQTQPPSKQSNNPPLQRSSSLIQLTSQNSSPNQQRAPQVIGVMQSQNSSAGNRGPRPL
EQVTCYKVSPGTGVRWGRSSPRWGPCSHPQDVWFI
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaatcatcgccagcgtggaccatatcaagttcgacttggagatcgcagtggag
cagcagctcggggcgcagccgctgcccttccccggcatggacaagtcgggggctgctgtc
tgcgaattctttctgaaagctgcttgcggcaaagggggcatgtgcccattccgccacatc
agtggcgagaagacagttgtctgcaaacactggctgcgtgggctgtgcaagaaaggggac
cagtgcgagttcctgcacgagtatgacatgaccaagatgcccgagtgctacttctattcc
aagttcggggagtgcagcaacaaggagtgccccttcctgcacatcgaccctgaatccaag
atcaaggactgcccttggtatgaccgtggtttctgcaagcacggtcccctgtgcaggcac
cggcacacacggagagtcatctgtgtgaattacctcgtgggattctgcccggagggaccc
tcatgtaaattcatgcaccctcgatttgaactgcccatgggaaccaccgagcagcctcca
ctgccgcagcagacccagcctccgagcaagcaaagtaacaatccgccattacaaaggtcg
tcctccttgatccagttaacgagtcagaactcttctcccaaccagcagagagccccgcag
gtcatcggggtcatgcagagtcaaaacagcagtgcaggaaaccggggaccccggccgctg
gagcaggtcacctgttacaaggtgagtcccgggactggggtacggtgggggcgctcttca
ccacgttggggaccatgctctcatccccaagatgtgtggttcatttga
DBGET
integrated database retrieval system
